LOC120546794


Basic Information

Item Value
gene id LOC120546794
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 6462940 ~ 6464802 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781999.1
TATTCTTGGGGTGAGTGACAGAGATGCttagggattttttttaaacgcatgTGACTAGTAAAATGctttgtgattggtcaaaataaGCCTACACGTACAGTAagttttcttttactgtctatagTTTTCAGCAGACATTTTTAAACCCCGCTAGCGATCCGTCATGGCTGACTCAAGTGAAGGAAGTGATACTGATGAAGTTACGAAGGATGACACAGGACCACATTCAAACGATAACCCCGATGATTTAGATGTACCAGTCGATCACGTGAGAGCAGTGGATCTTAGCGATGTTtcgagaggaagaggaggatatGCGCGATTTTGCTGGCTTCCAAGAAGAATGGAAGACCGACAACTTTCACGCTCATGAGAAGATCCCGTATAACCGCGAACCAGGCGTCAATATAGAGCTTCCAGAGGTTGTTACACCAATACAGGTCTTCTCACATGTTTTCACGGAGGAGCTGTGGATGCGACGTGTAACAGAAACAAATCTTTATGCTGAACAATCACGGAGCGCAACTCCAAACAGCAAGTGGGTACCAGTCACAGTTATTGAAATGAAGACTGTCATTGGACTGTGTCTTGCCATGGGGATCCTTGACCTGCCATCACGTAGAGATTTTTGGCGTCAGAAAAAGTGGCTTCTTCGAACGAGCATCCCCCAAGCCATTTCAAGAGAAAGATTTGCCATCATCTGGAGGTATCTCCACTTGCAAGACAACAGCAAAGATGTGAACCACTCTGACAAGCTCTGGAAAGTCAGATGGTACCTTGACTACCTGAAAGATCGATTCCAGGAACTGTACAAAGTGGACGGCTTTGTCAGCGTGGATGAAAGTATGGTGAAATTCAAGGGGAGACTTGCTTTCCGGCAATATCTTCCTCTCAAACCCACCAAGTGGGACATCAAGGTGTGGGTCATGGCTGAAAGCTCCACCGGGTATGTATCAAACTTCCAGGTCTACACCGGACGTGAGGGGGGAGTAGCGAGAAGGGCCTTGCGCACCGCGTTGTGATGGATCTGGCTATCCCATCTCTCCATTTTTATTGCGGGGTGCCGCTGTTTGAAGATCTGAAGGCTCAtggtctgtatgtgtgtggcacCGTTCGATCAAACAGAAAgggaatcccccccccccaaaaccgCCTGCCATGGATAAGCATCAGTACCAAGTGTCTCAGAAGGATGACCTGACCTTCTGTGCTTGGCAGGATACAAAGGTCGTTCTGGTACTGTGAAATTACCACGAGCCCATGGCAGAAGGGACTGTCAGGAGAAGACAGGGAGACATCCAGACAGAGGTCACAGTGCCAGCATGCCTTTCTGACTACCAGAAGCACATGAAGGGGGTCGATCTACTGGATCAGATGATAAGCTACTATCAGTTTCAGCATCGGTCCAAGAAATGGTGGCGGaggctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781999.1 True 1429 mRNA 0.48 2 6462940 6464802

Neighbor

gene id symbol gene type direction distance location
LOC120546792 LOC104959018 coding downstream 389720 6070546 ~ 6073220 (-)
gopc gopc coding downstream 453500 5986437 ~ 6009440 (-)
lrfn2b LOC103354004,LOC104943823 coding downstream 874703 5389153 ~ 5588237 (-)
LOC120547345 NA coding downstream 1183220 5259465 ~ 5279720 (-)
LOC120547277 NA coding downstream 1209240 5247945 ~ 5253700 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding upstream 297909 6762711 ~ 6800793 (-)
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding upstream 980059 7444861 ~ 7588065 (-)
LOC120546734 cd2ap coding upstream 1786914 8251716 ~ 8340747 (-)
LOC120546378 NA coding upstream 2084377 8549179 ~ 8550180 (-)
LOC120546379 LOC103375580 coding upstream 2093667 8558469 ~ 8559470 (-)
G182714 NA non-coding downstream 55017 6381208 ~ 6407923 (-)
G182711 NA non-coding downstream 89742 6372487 ~ 6373198 (-)
G182710 NA non-coding downstream 101461 6359461 ~ 6361479 (-)
G182694 LOC103355641,LOC104938520 non-coding downstream 178127 6283518 ~ 6284813 (-)
G182580 psmc6 non-coding downstream 274914 6169323 ~ 6188026 (-)
G182741 NA non-coding upstream 113291 6578093 ~ 6593825 (-)
G182759 NA non-coding upstream 164931 6629733 ~ 6630135 (-)
G182762 NA non-coding upstream 206439 6671241 ~ 6672648 (-)
G182769 NA non-coding upstream 245792 6710594 ~ 6711141 (-)
G182775 NA non-coding upstream 251943 6716745 ~ 6717073 (-)
cgrrf1 NA other downstream 193797 6232742 ~ 6269143 (-)
G182502 NA other downstream 551031 5911312 ~ 5911909 (-)
G182474 NA other downstream 670002 5790289 ~ 5792938 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other downstream 1149225 5311506 ~ 5313715 (-)
smim8 smim8 other downstream 1659448 4745773 ~ 4803492 (-)
G182764 NA other upstream 235689 6700491 ~ 6701117 (-)
G182952 NA other upstream 1296763 7761565 ~ 7766386 (-)
G182977 NA other upstream 1559913 8024715 ~ 8025044 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other upstream 1584656 8049458 ~ 8126664 (-)
LOC120546397 NA other upstream 2316526 8781328 ~ 8787218 (-)

Expression


Co-expression Network