ehd3 (LOC103369145,LOC104927375,LOC100697227,LOC101483142,LOC101071455,LOC105919213,LOC103457740)


Basic Information

Item Value
gene id ehd3
gene name LOC103369145,LOC104927375,LOC100697227,LOC101483142,LOC101071455,LOC105919213,LOC103457740
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 16082024 ~ 16098722 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782020.1
GTTTGTTAGACTGCCCACCGTTGGGCACTTCCGCCGGGCTCGGGTTTCCTTCGACTCGGCATTTAAATTGAGCTGCAGGACATCAGCTGCTGCTACATCCAGCGCAGTGCTATGACAGAAAATAACCCGTAGCGCTAGCAAAACAGGCTCCTTTTATTTTTGAACACAAAAACGAAAATATTACTGTTGGTCCTGGGTTGTTTTGTGGGCAGAAGAGCGGTTGAACAATAACGCTGCTTGAGCCCTGACAGCAGCTCGGTGCATCATTTTTGGGATTCCTCTGCTAGCTGTTGGACAAGATTGAATAGCGGTAATGTGATGTTGTGCATGAGCGGAATGATTTAACTGACTGGCATAGATTGGTAAACAAAACCAAACTTattgaatgcagtgttttttGGCCCAGGATCACGAGTGGCCTGGCCTGGGACGACCGATGGACTAACGTTGAAAGATGAGAGTGCATTTAAAGGGTCAGGTTTAAATTCTGATTACAATATACAACAGTTTCGATTTCTGTTGTAGACATTAACGGAGACAAACCTCTTAAATTTATATAATCTAGCTGGGGTGGATCTAACATATATTTTtaacaacatttttctttttagactAATGTGTGATCTTTAGATTTtccaaaacaaactttttaAAGAGATTTAATCTTTTTTGCAAcaacagtatttatttatttttaggttGTTGTAGGCTACTATAATTTTTCTTAGGATTTAAAGGGGGATCTTaggttatttgttttttttaaataaattagatCTTTGCTTGATCTTATCTCTTCTTGTCTTAAATGTGAGGAAATCTGTCTTTCAGCTTGACCTTAATAGTATCAGACCGATACCTCAAGGACAAAACTAATTTGTAGACCTTTCAGGATAGACAATTGACAAAAGTCagtcaacaacaaaataagctGACACAAGTGACAAACAGCATCTTTGACCAGTTACACTTATCAAAGGCTTTAAGAGCTTTAACAATAAGCAACCAGCAATCATGTTCAGCTGGCTTGGAAGCGATGACAGGAGGAAGAAGGATCCTGAGGTCTTTCAGACCGTCAGTGAGGGACTGAAGAAGCTCTACAAAACCAAACTCCTGCCGCTGGAGGAGTGCTACAAGTTTCATGAGTTTCACTCTCCGGCTCTGGAGGATGCAGACTTTGACAACAAGCCCATGGtcttactggttggacagtactCCACCGGCAAGACGAGCTTCATACGCTACCTGTTGGAGCAGGATTTTCCCGGAATGCGGATCGGCCCCGAACCCACCACGGATTCCTTCATCGCGGTGATGCACGGCGACACAGAAGGAGTCATCCCCGGCAACGCTTTAGTGGTTGACCCCAAGAAGCCCTTCAGAAAGCTGAACGCATTTGGAAACGCATTCCTCAACAGATTTGTGTGTGCCCAACTGCCTAACCCAGTGCTGGAAAGCATCAGTGTGATTGACACACCAGGAATTCTGTCAGGAGAGAAACAGAGGATCAGTCGAGGCTATGACTTTGCGGCTGTCTTGGAGTGGTTTGCGGAGCGAGTGGACAGGATCATATTACTGTTTGACGCTCACAAACTGGACATCTCTGATGAGTTCTCAGATGTGATAAAAGCCCTGAAGAACCATGAAGACAAGATCAGGGTTGTGCTGAACAAGGCTGACCAGATAGAGACCCAGCAGTTGATGAGAGTGTACGGTGCCCTGATGTGGTCACTGGGGAAAATAGTCAACACCCCTGAGGTGATCCGCGTCTACATTGGGTCCTTTTGGTCCCACCCTCTGTTGATTCCAGACAACAGGAAGCTGTTTGAAGCGGAGGAACAGGACTTATTTAAGGACATTCAGTCTTTACCGAGAAATGCAGCGCTTAGAAAACTCAACGATCTGATTAAGAGGGCAAGACTAGCCAAGGTCCATGCCTACATTATCAGCGCACTGAAGAAAGACATGCCCTCTGTGTTTGGGAAggagaacaagaagaaagaacTGATCGGCAGCCTGGGAGATATTTACAAACGCATAGAGAGAGAGCATCAGATATCACCTGGAGATTTTCCTAATCTGAAGAAGATGCAGGACCAACTCCAAGCTCAGGATCTCAACAAATTCCAGCCTCTGAAACCCAAACTCCTGGAAGCAGTGGAGGACATGCTGGCCCACGACATCGCTGGCTTAATGGTCCTGGTCCGACAAGAAGAAAACCAGCGTCCCAACCCAGTCGTGAAGGGCGGTGCGTTCGACGGCACTATGGACGGCCCGTTTGGTCACGGGTATGGCGAAGGAGCCGGCGAAGGCATCGACGAAGCAGACTGGGTCGTCGCACGTGACAAACCTGCTTACGATGAGATTTTCTACACATTGTCTCCCGTCAATGGGAAGGTGACCGGAGCCAACGCCAAGAGGGAGATGGTGAAGTCAAAACTGCCCAATACGGTGCTGGGAAAGATCTGGAAGCTGGCCGACATCGATAAGGATGGGATGCTTGATGATGAGGAGTTTGCGTTGGCCAATCACCTGATAAAAGTGAAACTGGAGGGACATGAACTGCCATCGGACCTGCCTGCACACCTGGTGCCTCCTTCCAAGAGGAAAATACCTGAGTAAATGTAAGATTACATCATCTTCTAACCCCAAAACCTGTAACTAGATCCACCCCCTCCACCCAAAGAAACTTATCAAAATTCAAATATAGCAAaacaacattattatttttaaaaaaaattggaacaAAATTAGACCCCATTTCCAACTCTGTTGGATTCCAACCTGCTCTGTTGCTGTCATCCCCACATCTGCAGAATTTCCTTAGCTTCAAGAGGCAAATATTACTACAAAATATTCAGTCAAATAAAGAATGATAATGAATGCTAATTGACTTAGCagatttaaatgctacattatTGAAGTGCTGAAATGGCTTTTACCAGGGTAGAGAAACAGGATCTTTTTGAGTCCTTTAAGTATGAGATATTGGGAGCTGTTAGGTAGAACTGGGGTTTGAGATGTTAGGACAGCTGATATGGTAATTAATAAAGACAAACTATTTAAAAGTCTAAAACAAGAAACACTGGAATACAACAACATGTAAGGTGATCTAAACTACTGGAAGAAAATGGGAGAGATGTGAAAATGTGAAGACTAAAAGAAAGAGGTTTGGTTGGAAGGATCATTCTGGGAGAGGGGAACAATGggatataaaaatgaaaaatattgtattattatcGGTAACGAATACAGTAAACTCATGTTTGACTACAAGATTCCACACGGCCGCCAAAAACATGCCACAGTCCTTGTATCTCGAGGTCCTGCATTGTTTCTGATCTCCTGGCATTGCTGAGTATTTTGGCTTTTGTTTCACGGCGACATATTAAAGAGCTACAAAGGTTTCCTGCCAAGTCGCTTGaaattacacacaaacaaatttgtAGAAGCGAGCGcgcgcgcaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaaattaacaCATTCTGGTTATATTGTTTGTAACCAGAGGAGAGAATAGAAAATGTGGAGCATCAATTATTATAACAAGAAAATGGCCTACatcaacttttaaaaaaatgtgatatttGTTTAAATGACATTTAACTGTAGCACCTGGATTGACCTAATGCAATGAAGGAGGACAATGTTTTTCTAATGGGAAACAATCATGGGAGAAACTTAGGATGGCAAGTGTTTAGTctattttatgatttttacATAGTTCTAAATATCATTAACATGTTTGGGAATACTGTGACTATACTATGGAACTATATAATGGGTCTTGTTTGGACACACAAGTGTGCGGACAGTCTCAGTATAAATGTATTGTAAGGACTTGTGTTGAATGTGCAGACGTTCACTGTTCTGTGTGGCCTCATCCTGACTATGTATGCATATGACCACATGTATTGGTGGTATTATTTGTAACGTATATGTATTAAGTCTTAAGCATCTCACAGGCTACTGAGTCGGGAGTATTCCAGTGTGCTGTTCATTGAAAATTGATTAATCAGTTTTTGTTCACCTAGAAAGTGATCTAACCTAACAGTCCAGAAAGTGAACACACagctgtttgcttttttttgtgataaCAAAACACTAATCAAcacatttttcaaatgtttttgaataaaaatgtgGCTTTCCATTCCATGTGTTTAAATTgtatacatgtaataaatgtaatctGATTTACTCTAGCGATATGCCagtatgtatgttgtgtatatattttacattagGACTATATTTGTGGTTAATGATGTGTCTTGATTATAAGATTAAACAATAAACTAACTAAATGTGGGTTCCCATATGATAAGAAATGGGTTTTATGAGTCAGACAGTATTCACCCAGGTTAAGCTACAGAAATGACTGAAATATTTCCAGTTTATGGACATATTGTGCCCctccctgtgtgtctctgtgctgttACTGTGAATCTATTGTACATATTACGACTGTTTTCATTCCATAAACACAGATTGAGAAATCATCCACATCATGCATACAGCACATGCATCACTTGCCCACATTTCACAGATGAGCCTGATCAGAtcataaaaaaagttatttgaATGTGGATTCCTTTGGAAAACAAAGTCCTTGTTTTGAGTTATCTTCATACCCTGACAAATTGCAACACGAGATCCTGTGTTCTGGTAAATACACTAAGTGGAAACACTGGCgttatggctttttttcctgTTCTAAGATAGTTATGCATTGCTAAATCTGTACTTCACTGCTTTTCTGTCGACATAAGCAACAGTCAAAGTGTAATAAACTTTAATTTACTCAA
>XM_039782021.1
GTTTGTTAGACTGCCCACCGTTGGGCACTTCCGCCGGGCTCGGGTTTCCTTCGACTCGGCATTTAAATTGAGCTGCAGGACATCAGCTGCTGCTACATCCAGCGCAGTGCTATGACAGAAAATAACCCGTAGCGCTAGCAAAACAGGCTCCTTTTATTTTTGAACACAAAAACGAAAATATTACTGTTGGTCCTGGGTTGTTTTGTGGGCAGAAGAGCGGTTGAACAATAACGCTGCTTGAGCCCTGACAGCAGCTCGGTGCATCATTTTTGGGATTCCTCTGCTAGCTGTTGGACAAGATTGAATAGCGGTAATGTGATGTTGTGCATGAGCGGAATGATTTAACTGACTGGCATAGATTGGTAAACAAAACCAAACTTattgaatgcagtgttttttGGCCCAGGATCACGAGTGGCCTGGCCTGGGACGACCGATGGACTAACGTTGAAAGATGAGAGTGCATTTAAAGGGTCAGGTTTAAATTCTGATTACAATATACAACAGTTTCGATTTCTGTTGTAGACATTAACGGAGACAAACCTCTTAAATTTATATAATCTAGCTGGGGTGGATCTAACATATATTTTtaacaacatttttctttttagactAATGTGTGATCTTTAGATTTtccaaaacaaactttttaAAGAGATTTAATCTTTTTTGCAAcaacagtatttatttatttttaggttGTTGTAGGCTACTATAATTTTTCTTAGGATTTAAAGGGGGATCTTaggttatttgttttttttaaataaattagatCTTTGCTTGATCTTATCTCTTCTTGTCTTAAATGTaaaataagctGACACAAGTGACAAACAGCATCTTTGACCAGTTACACTTATCAAAGGCTTTAAGAGCTTTAACAATAAGCAACCAGCAATCATGTTCAGCTGGCTTGGAAGCGATGACAGGAGGAAGAAGGATCCTGAGGTCTTTCAGACCGTCAGTGAGGGACTGAAGAAGCTCTACAAAACCAAACTCCTGCCGCTGGAGGAGTGCTACAAGTTTCATGAGTTTCACTCTCCGGCTCTGGAGGATGCAGACTTTGACAACAAGCCCATGGtcttactggttggacagtactCCACCGGCAAGACGAGCTTCATACGCTACCTGTTGGAGCAGGATTTTCCCGGAATGCGGATCGGCCCCGAACCCACCACGGATTCCTTCATCGCGGTGATGCACGGCGACACAGAAGGAGTCATCCCCGGCAACGCTTTAGTGGTTGACCCCAAGAAGCCCTTCAGAAAGCTGAACGCATTTGGAAACGCATTCCTCAACAGATTTGTGTGTGCCCAACTGCCTAACCCAGTGCTGGAAAGCATCAGTGTGATTGACACACCAGGAATTCTGTCAGGAGAGAAACAGAGGATCAGTCGAGGCTATGACTTTGCGGCTGTCTTGGAGTGGTTTGCGGAGCGAGTGGACAGGATCATATTACTGTTTGACGCTCACAAACTGGACATCTCTGATGAGTTCTCAGATGTGATAAAAGCCCTGAAGAACCATGAAGACAAGATCAGGGTTGTGCTGAACAAGGCTGACCAGATAGAGACCCAGCAGTTGATGAGAGTGTACGGTGCCCTGATGTGGTCACTGGGGAAAATAGTCAACACCCCTGAGGTGATCCGCGTCTACATTGGGTCCTTTTGGTCCCACCCTCTGTTGATTCCAGACAACAGGAAGCTGTTTGAAGCGGAGGAACAGGACTTATTTAAGGACATTCAGTCTTTACCGAGAAATGCAGCGCTTAGAAAACTCAACGATCTGATTAAGAGGGCAAGACTAGCCAAGGTCCATGCCTACATTATCAGCGCACTGAAGAAAGACATGCCCTCTGTGTTTGGGAAggagaacaagaagaaagaacTGATCGGCAGCCTGGGAGATATTTACAAACGCATAGAGAGAGAGCATCAGATATCACCTGGAGATTTTCCTAATCTGAAGAAGATGCAGGACCAACTCCAAGCTCAGGATCTCAACAAATTCCAGCCTCTGAAACCCAAACTCCTGGAAGCAGTGGAGGACATGCTGGCCCACGACATCGCTGGCTTAATGGTCCTGGTCCGACAAGAAGAAAACCAGCGTCCCAACCCAGTCGTGAAGGGCGGTGCGTTCGACGGCACTATGGACGGCCCGTTTGGTCACGGGTATGGCGAAGGAGCCGGCGAAGGCATCGACGAAGCAGACTGGGTCGTCGCACGTGACAAACCTGCTTACGATGAGATTTTCTACACATTGTCTCCCGTCAATGGGAAGGTGACCGGAGCCAACGCCAAGAGGGAGATGGTGAAGTCAAAACTGCCCAATACGGTGCTGGGAAAGATCTGGAAGCTGGCCGACATCGATAAGGATGGGATGCTTGATGATGAGGAGTTTGCGTTGGCCAATCACCTGATAAAAGTGAAACTGGAGGGACATGAACTGCCATCGGACCTGCCTGCACACCTGGTGCCTCCTTCCAAGAGGAAAATACCTGAGTAAATGTAAGATTACATCATCTTCTAACCCCAAAACCTGTAACTAGATCCACCCCCTCCACCCAAAGAAACTTATCAAAATTCAAATATAGCAAaacaacattattatttttaaaaaaaattggaacaAAATTAGACCCCATTTCCAACTCTGTTGGATTCCAACCTGCTCTGTTGCTGTCATCCCCACATCTGCAGAATTTCCTTAGCTTCAAGAGGCAAATATTACTACAAAATATTCAGTCAAATAAAGAATGATAATGAATGCTAATTGACTTAGCagatttaaatgctacattatTGAAGTGCTGAAATGGCTTTTACCAGGGTAGAGAAACAGGATCTTTTTGAGTCCTTTAAGTATGAGATATTGGGAGCTGTTAGGTAGAACTGGGGTTTGAGATGTTAGGACAGCTGATATGGTAATTAATAAAGACAAACTATTTAAAAGTCTAAAACAAGAAACACTGGAATACAACAACATGTAAGGTGATCTAAACTACTGGAAGAAAATGGGAGAGATGTGAAAATGTGAAGACTAAAAGAAAGAGGTTTGGTTGGAAGGATCATTCTGGGAGAGGGGAACAATGggatataaaaatgaaaaatattgtattattatcGGTAACGAATACAGTAAACTCATGTTTGACTACAAGATTCCACACGGCCGCCAAAAACATGCCACAGTCCTTGTATCTCGAGGTCCTGCATTGTTTCTGATCTCCTGGCATTGCTGAGTATTTTGGCTTTTGTTTCACGGCGACATATTAAAGAGCTACAAAGGTTTCCTGCCAAGTCGCTTGaaattacacacaaacaaatttgtAGAAGCGAGCGcgcgcgcaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaaattaacaCATTCTGGTTATATTGTTTGTAACCAGAGGAGAGAATAGAAAATGTGGAGCATCAATTATTATAACAAGAAAATGGCCTACatcaacttttaaaaaaatgtgatatttGTTTAAATGACATTTAACTGTAGCACCTGGATTGACCTAATGCAATGAAGGAGGACAATGTTTTTCTAATGGGAAACAATCATGGGAGAAACTTAGGATGGCAAGTGTTTAGTctattttatgatttttacATAGTTCTAAATATCATTAACATGTTTGGGAATACTGTGACTATACTATGGAACTATATAATGGGTCTTGTTTGGACACACAAGTGTGCGGACAGTCTCAGTATAAATGTATTGTAAGGACTTGTGTTGAATGTGCAGACGTTCACTGTTCTGTGTGGCCTCATCCTGACTATGTATGCATATGACCACATGTATTGGTGGTATTATTTGTAACGTATATGTATTAAGTCTTAAGCATCTCACAGGCTACTGAGTCGGGAGTATTCCAGTGTGCTGTTCATTGAAAATTGATTAATCAGTTTTTGTTCACCTAGAAAGTGATCTAACCTAACAGTCCAGAAAGTGAACACACagctgtttgcttttttttgtgataaCAAAACACTAATCAAcacatttttcaaatgtttttgaataaaaatgtgGCTTTCCATTCCATGTGTTTAAATTgtatacatgtaataaatgtaatctGATTTACTCTAGCGATATGCCagtatgtatgttgtgtatatattttacattagGACTATATTTGTGGTTAATGATGTGTCTTGATTATAAGATTAAACAATAAACTAACTAAATGTGGGTTCCCATATGATAAGAAATGGGTTTTATGAGTCAGACAGTATTCACCCAGGTTAAGCTACAGAAATGACTGAAATATTTCCAGTTTATGGACATATTGTGCCCctccctgtgtgtctctgtgctgttACTGTGAATCTATTGTACATATTACGACTGTTTTCATTCCATAAACACAGATTGAGAAATCATCCACATCATGCATACAGCACATGCATCACTTGCCCACATTTCACAGATGAGCCTGATCAGAtcataaaaaaagttatttgaATGTGGATTCCTTTGGAAAACAAAGTCCTTGTTTTGAGTTATCTTCATACCCTGACAAATTGCAACACGAGATCCTGTGTTCTGGTAAATACACTAAGTGGAAACACTGGCgttatggctttttttcctgTTCTAAGATAGTTATGCATTGCTAAATCTGTACTTCACTGCTTTTCTGTCGACATAAGCAACAGTCAAAGTGTAATAAACTTTAATTTACTCAA

Function

NR:

description
PREDICTED: EH domain-containing protein 3

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005509 calcium ion binding molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K12476 EHD3; EH domain-containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782020.1 True 4908 mRNA 0.41 8 16082024 16098722
XM_039782021.1 False 4797 mRNA 0.41 9 16082024 16098722

Neighbor

gene id symbol gene type direction distance location
stum stum,LOC102783313 coding downstream 20117 16045919 ~ 16061907 (-)
epb41l2 epb41l2,LOC106936101,LOC103373577 coding downstream 101824 15921621 ~ 15980200 (-)
tmem244 tmem244 coding downstream 162384 15841146 ~ 15919640 (-)
fkbp6 fkbp6 coding downstream 242508 15831779 ~ 15839516 (-)
arhgap18 arhgap18 coding downstream 251238 15808083 ~ 15830786 (-)
il20ra NA coding upstream 3331 16102053 ~ 16108572 (-)
LOC120547308 NA coding upstream 90278 16189000 ~ 16195106 (-)
LOC120547182 trdn,LOC103371166 coding upstream 109537 16208259 ~ 16231901 (-)
hddc2 hddc2 coding upstream 277164 16375886 ~ 16379169 (-)
LOC120547270 LOC104949332 coding upstream 302540 16401262 ~ 16409291 (-)
G184705 NA non-coding downstream 17110 16064671 ~ 16064914 (-)
G184702 coq8a,LOC102220701,LOC103144166 non-coding downstream 39809 16037750 ~ 16042215 (-)
G184699 LOC107390449 non-coding downstream 48294 16025218 ~ 16033730 (-)
G184696 NA non-coding downstream 66489 16012500 ~ 16015535 (-)
G184668 ctgf non-coding downstream 306538 15772686 ~ 15775486 (-)
G184707 NA non-coding upstream 1422 16100144 ~ 16100732 (-)
LOC120546331 NA non-coding upstream 26663 16125385 ~ 16145169 (-)
G184730 NA non-coding upstream 151475 16250197 ~ 16251869 (-)
G184731 NA non-coding upstream 192668 16291390 ~ 16356567 (-)
G184755 NA non-coding upstream 280723 16379445 ~ 16382479 (-)
LOC120546224 NA other downstream 13715 16065854 ~ 16068309 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other downstream 286386 15788826 ~ 15795638 (-)
rps29 NA other downstream 970545 15110240 ~ 15111479 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other downstream 1414423 14657177 ~ 14667601 (-)
naa30 naa30,LOC102795089,LOC104960600 other downstream 1469078 14571380 ~ 14612946 (-)
LOC120546332 akap7 other upstream 47868 16146590 ~ 16188330 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other upstream 391928 16490650 ~ 16517874 (-)
gpatch2 gpatch2,LOC102785715 other upstream 726930 16825652 ~ 16835983 (-)
LOC120547341 NA other upstream 1167637 17266359 ~ 17269634 (-)
tbpl1 tbpl1 other upstream 1524402 17623124 ~ 17631351 (-)

Expression


Co-expression Network