nfkbie (nfkbie)


Basic Information

Item Value
gene id nfkbie
gene name nfkbie
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 23578378 ~ 23589689 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782077.1
gtgtgtgtgtttgctcacGCGCACTGGGGATTCCCCCGCGTGACAAAAACAGCTTCGTCTTTCACATGTCAGCTTATCGCCTTTCATTGCTCATATGCTCTCCGCCTGGAGCCCATACTGTTACCGGATATCTAGACAACGGGCGGCCGTTTCGCCTTTTTTCGCTTGTTTCGAACCCTGTTCACGTTTGGAATGAACGTACAACAGtttgaaactttaaaaaaaacaataattgatCAAAAGTGGAGGCCTGTTGCTGTAAGGCAATGCATTATCGGTTAGGGGCATGAAACGAAGCGGCTCGTTCCTCAGGTTTCACAAAGGTGCGGAGGTTTTCTTAGGTGTCAGTAGCCTCGGAGTCCGGTCACATCACCGAGCGGCGACAACACCCGCTAGTAGCCTTTAAATCCtcgaggaaggaggaaggagggagggggaaacCCAGCGAGGCCACCACCATCATGGCGAGCGACGACTGTAGGAAAGATGACTTGCTGGAGGATAACCGCACAGATTCGGGCATTGACTCGTATCGTTTAATACTGAAGTCGGAGGAGCCCCGGGAGCCGAGCGCCGACTTCAGCGGGCCAAGGGACAAGATTTCTACTGGGGAGGAGCGCCTGGACTCAGCCTATGGCTCCTCGTCTATCACGGTGGAGAGTTTGTCAGAGATAGTTGGGGGCTGCACGCTTTCCAGCGCTCAAAAGGAGCAAGCACAGAGCTCTGAACTCTCTGAGCAGGAGAACTTGCTCACGACCATAACTGAAGATGGAGACAcAATCCTGCACTTAGCAATCATCCATGAAGACGAATTTATCGCCCAACAGTTGATACAGCTATTCCCAAAAGAAGTCCTGGACATCCAAAACAATTTATACCAGAGCCCTTTGCACTTGGCTACCTACCTGAACCTGACCGATGTGGTGAAGGGCCTGATGGAGAAAGGTTCCAGTCTGGGGCTGCAGGACCAGGAGGGGAACACTGCGCTCCATGTGGCCTGCCAGCATGGGCAGATAGAGTGTGCCACTGAGATGACCAGAGAGGTTTCCCCAAGCAAGCTGGCACCTGTCCTCGAGACCCAGAACTGGAGAGGTCTTGCCTGTCTTCACTTGGCTGCACTGAACAGGCAATATCAGATTATGAAGCTCCTGGTGAAAAAGAAAGCAGACCTAAATATACAGGAAGGAACCAGTGGGAAAACAGCTCTTCATCTCGCCGTTGAGCTGCATGATGTCACATCAGTAAAGCTGCTGCTCAGCAAGGGAGCCAATGTGGATGCTGCCATGTTTAACGGCTGCACACCTCTGCATCTTGCAGTTGGGAGACAGGACGCCGCCATCGCCAACCTCCTCTGCCAGTCTGGCGCTGACACAATGCTACGAAACATGGAGGACGAAACGGCGCTGGATCTGGCCGACGGCAATGATGATATTCTGGCTCTATTTCCTTTTGATGATATCCAGATCTCCGGGAGGTCGGTGGTCAGTGTGAAGTTTTAAGCTGAATCTTAACAGATAACCTTGGAATTGTCTGAAGCTTCACTGTGGCTGGAACCTTTtgattggaaaaaaaagttttcagtAAAATAGTTTCTCTATTTGTAATACATTCTGATTTGATCTGTATTTAACCATTATTTAGACAAATATGTGCACCATATCTTTCTTCCCTCTGACAAAAAGTGATTTTGCTTAATCAAACACTGAAAAAGATCTGTTTGTGAGTCATTGGTTAAATTATTCTGCTTCTTTTCACATGCCTATGGAGGGGTTGCAACAAAAGCCACCTCAATGTGAGTGCCAAACTTTCTATAAACATGTTCAATGTCTATAAAAAATTCTACCTCTTTATCACATTAACCTAGTTTTAATGACTAGAAATTGAACATGCAAATTGCTTTGTTTCACAGTTTCTCAAACTTAATCAGTGCTATCATTGCATTTTATTTCCACAGCCACAGAAAGACTTTTGAAGGAATGCAATCAGAGGCAGAACTAaaatttattaaatgtaaaacTGTTTGTCACAAATAGACCTGCAATTCTACAAAGACAAACTAATCACATCCCTGCTATTTGTTACAAAACATGTAgcccaaataaaatgtaatatttaagaaaaaaaaatgcagcttcatctttttgtttttttaggtttGCTTTCATGCTGTGAAGCAGTTTTCTCTATTTATCTCATCTTATCCTTAATCTGCAGTAAACTGTTCCTGTACGTTGGTGTGTAATTGCACTGCCCTGTCTAGTTAATATAAGCagtgtgtttattttgtaataaaatgaagaagaaaaaaaactca
>XR_005636955.1
gtgtgtgtgtttgctcacGCGCACTGGGGATTCCCCCGCGTGACAAAAACAGCTTCGTCTTTCACATGTCAGCTTATCGCCTTTCATTGCTCATATGCTCTCCGCCTGGAGCCCATACTGTTACCGGATATCTAGACAACGGGCGGCCGTTTCGCCTTTTTTCGCTTGTTTCGAACCCTGTTCACGTTTGGAATGAACGTACAACAGtttgaaactttaaaaaaaacaataattgatCAAAAGTGGAGGCCTGTTGCTGTAAGGCAATGCATTATCGGTTAGGGGCATGAAACGAAGCGGCTCGTTCCTCAGGTTTCACAAAGGTGCGGAGGTTTTCTTAGGTGTCAGTAGCCTCGGAGTCCGGTCACATCACCGAGCGGCGACAACACCCGCTAGTAGCCTTTAAATCCtcgaggaaggaggaaggagggagggggaaacCCAGCGAGGCCACCACCATCATGGCGAGCGACGACTGTAGGAAAGATGACTTGCTGGAGGATAACCGCACAGATTCGGGCATTGACTCGTATCGTTTAATACTGAAGTCGGAGGAGCCCCGGGAGCCGAGCGCCGACTTCAGCGGGCCAAGGGACAAGATTTCTACTGGGGAGGAGCGCCTGGACTCAGCCTATGGCTCCTCGTCTATCACGGTGGAGAGTTTGTCAGAGATAGTTGGGGGCTGCACGCTTTCCAGCGCTCAAAAGGAGCAAGCACAGAGCTCTGAACTCTCTGAGCAGGAGAACTTGCTCACGACCATAACTGAAGATGGAGACAcAATCCTGCACTTAGCAATCATCCATGAAGACGAATTTATCGCCCAACAGTTGATACAGCTATTCCCAAAAGAAGTCCTGGACATCCAAAACAATTTATACCAGAGCCCTTTGCACTTGGCTACCTACCTGAACCTGACCGATGTGGTGAAGGGCCTGATGGAGAAAGGTTCCAGTCTGGGGCTGCAGGACCAGGAGGGGAACACTGCGCTCCATGTGGCCTGCCAGCATGGGCAGATAGAGTGTGCCACTGAGATGACCAGAGAGGTTTCCCCAAGCAAGCTGGCACCTGTCCTCGAGACCCAGAACTGGAGAGGTCTTGCCTGTCTTCACTTGGCTGCACTGAACAGGCAATATCAGATTATGAAGCTCCTGGTGAAAAAGAAAGCAGACCTAAATATACAGGAAGGAACCAGTGGGAAAACAGCTCTTCATCTCGCCGTTGAGCTGCATGATGTCACATCAGTAAAGCTGCTGCTCAGCAAGGGAGCCAATGTGGATGCTGCCATGTTTAACGGCTGCACACCTCTGCATCTTGCAGTTGGGAGACAGGACGCCGCCATCGCCAACCTCCTCTGCCAGTCTGGCGCTGACACAATGCTACGAAACATGGAGGACGAAACGGCGCTGGATCTGGCCGACGGCAATGATGATATTCTGGCTCTATTTCCTTTTGATGATATCCAGATCTCCGGGAGGTCGGTGGTCAGTGTGAAGTTTTAAGCTGAATCTTAACAGATAACCTTGGAATTGTCTGAAGCTTCACTGTGGCTGGAACCTTTtgattggaaaaaaaagttttcagtAAAATAGTTTCTCTATTTGTAATACATTCTGATTTGATCTGTATTTAACCATTATTTAGACAAATATGTGCACCATATCTTTCTTCCCTCTGACAAAAAGTGATTTTGCTTAATCAAACACTGAAAAAGATCTGTTTGTGAGTCATTGGTTAAATTATTCTGCTTCTTTTCACATGCCTATGGAGGGGTTGCAACAAAAGCCACCTCAATCCACAGAAAGACTTTTGAAGGAATGCAATCAGAGGCAGAACTAaaatttattaaatgtaaaacTGTTTGTCACAAATAGACCTGCAATTCTACAAAGACAAACTAATCACATCCCTGCTATTTGTTACAAAACATGTAgcccaaataaaatgtaatatttaagaaaaaaaaatgcagcttcatctttttgtttttttaggtttGCTTTCATGCTGTGAAGCAGTTTTCTCTATTTATCTCATCTTATCCTTAATCTGCAGTAAACTGTTCCTGTACGTTGGTGTGTAATTGCACTGCCCTGTCTAGTTAATATAAGCagtgtgtttattttgtaataaaatgaagaagaaaaaaaactca
>XR_005636956.1
gtgtgtgtgtttgctcacGCGCACTGGGGATTCCCCCGCGTGACAAAAACAGCTTCGTCTTTCACATGTCAGCTTATCGCCTTTCATTGCTCATATGCTCTCCGCCTGGAGCCCATACTGTTACCGGATATCTAGACAACGGGCGGCCGTTTCGCCTTTTTTCGCTTGTTTCGAACCCTGTTCACGTTTGGAATGAACGTACAACAGtttgaaactttaaaaaaaacaataattgatCAAAAGTGGAGGCCTGTTGCTGTAAGGCAATGCATTATCGGTTAGGGGCATGAAACGAAGCGGCTCGTTCCTCAGGTTTCACAAAGGTGCGGAGGTTTTCTTAGGTGTCAGTAGCCTCGGAGTCCGGTCACATCACCGAGCGGCGACAACACCCGCTAGTAGCCTTTAAATCCtcgaggaaggaggaaggagggagggggaaacCCAGCGAGGCCACCACCATCATGGCGAGCGACGACTGTAGGAAAGATGACTTGCTGGAGGATAACCGCACAGATTCGGGCATTGACTCGTATCGTTTAATACTGAAGTCGGAGGAGCCCCGGGAGCCGAGCGCCGACTTCAGCGGGCCAAGGGACAAGATTTCTACTGGGGAGGAGCGCCTGGACTCAGCCTATGGCTCCTCGTCTATCACGGTGGAGAGTTTGTCAGAGATAGTTGGGGGCTGCACGCTTTCCAGCGCTCAAAAGGAGCAAGCACAGAGCTCTGAACTCTCTGAGCAGGAGAACTTGCTCACGACCATAACTGAAGATGGAGACAcAATCCTGCACTTAGCAATCATCCATGAAGACGAATTTATCGCCCAACAGTTGATACAGCTATTCCCAAAAGAAGTCCTGGACATCCAAAACAATTTATACCAGAGCCCTTTGCACTTGGCTACCTACCTGAACCTGACCGATGTGGTGAAGGGCCTGATGGAGAAAGGTTCCAGTCTGGGGCTGCAGGACCAGGAGGGGAACACTGCGCTCCATGTGGCCTGCCAGCATGGGCAGATAGAGTGTGCCACTGAGATGACCAGAGAGGTTTCCCCAAGCAAGCTGGCACCTGTCCTCGAGACCCAGAACTGGAGAGGTCTTGCCTGTCTTCACTTGGCTGCACTGAACAGGCAATATCAGATTATGAAGCTCCTGGTGAAAAAGAAAGCAGACCTAAATATACAGGAAGGAACCAGTGGGAAAACAGCTCTTCATCTCGCCGTTGAGCTGCATGATGTCACATCAGTAAAGCTGCTGCTCAGCAAGGGAGCCAATGTGGATGCTGCCATGTTTAACGGCTGCACACCTCTGCATCTTGCAGTTGGGAGACAGGACGCCGCCATCGCCAACCTCCTCTGCCAGTCTGGCGCTGACACAATGCTACGAAACATGGAGGACGAAACGGCGCTGGATCTGGCCGACGGCAATGATGATATTCTGGCTCTATTTCCTTTTGATGATATCCAGATCTCCGGGAGGTCGGTGGTCAGTGTGAAGTTTTAAGCTGAATCTTAACAGATAACCTTGGAATTGTCTGAAGCTTCACTGTGGCTGGAACCTTTtgattggaaaaaaaagttttcagtAAAATAGTTTCTCTATTTGTAATACATTCTGATTTGATCTGTATTTAACCATTATTTAGACAAATATGTGCACCATATCTTTCTTCCCTCTGACAAAAAGTGATTTTGCTTAATCAAACACTGAAAAAGATCTGTTTGTGAGTCATTGGTTAAATTATTCTGCTTCTTTTCACATGCCTATGGAGGGGTTGCAACAAAAGCCACCTCAATGGAATTTTTGGGGCCATCCACCATCTGCTCTACACTGGCAAATCCAGGTTTGTCAAAAAGACTTGCAAACAGAGACCGAAGAAGCAATATGACTTGTATATTGCCATTTTAGTAAAAGGAGAAGTTAGGTAATTTAATGAGCCCTTTTTAGCTCACCTGTAtaaatctgtatttttttttttgttctttgctttttattttaactCTGCATATACAGAAAATCACTACTGTGTGttgtttacagcaaatgcatcCTATTATAAATGTATACAGTAAAAATAATAAGTTCACTTCATGACAAGGCTCTTTCATGAAAACACCAAGTTCTGTTCTTTGTTTCCTGTCAGCTGCCTTTGTAACCTATATCTTTTGTTTTCCTGTAAGTGGCTTCTTCCTCATGGCTCCTATAATACAATGACTGTGGAGTGATGGGAAATTCCACTTGGCTCCATCTCTTACAGTATAAGCACATACCAAAGCAAAAGCAGGTTTAATAAGGTTTAGAATAAGATGGAAACTGTCAAGTAGGTATATTAGCCAGAATAATTATCAACAGTAAATACACTTAACTTAATCTTTAGCCAATCATATTTTCCTCTGATTCTTGTgcacaaacaagtttattttgatGACGGCTTCTAAACAGCTAGGACAGAGAGTTATGAAACTATACATACTTCCCTATTGAGACTATGGCCTGAAGCTATCTGTGTTTTATACAGTGTATTGTAGGTCATGCTGGTGTTGCCATGGGCTTTGTTAAAAACAGAAAGGTGTTGTGAAAAAGTTATATAAGCTAGTTTCACTTAtttgagtaaaagtataaatactACAATGTAAAATCCACTCTATTGCAAGTACAATTCCTGCATCAGTTAATGTTTGAAAAGTAATaatactcattatgcagaatggccacTTTTATTCTGTTGAATTCTTATGTGTATTATGTCATTCTTTTATTATTTCTCTTGCCTTAATGTGTGCATTTTAACATTGCAGCTGCTTGAGGTGTAACTCATTTTAACTACTTTGTGTACTGTTGGGAAGTGTCTGGTACAGCTTCAACTACTTTCAAGGTGCATGGAGAAAACTTCTTGAATGAAACGTGTTGGTCTCACAATAAAGTTGCTCTTTATTTGACAA

Function

symbol description
nfkbie Orthologous to human NFKBIE (NFKB inhibitor epsilon).

NR:

description
NF-kappa-B inhibitor epsilon

GO: NA

KEGG:

id description
K05872 NFKBIE; NF-kappa-B inhibitor epsilon

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782077.1 False 2314 mRNA 0.45 6 23578378 23588514
XR_005636955.1 False 2152 transcript 0.46 7 23578378 23588514
XR_005636956.1 True 2938 transcript 0.43 7 23578378 23589689

Neighbor

gene id symbol gene type direction distance location
rnf8 NA coding upstream 24112 23548578 ~ 23554266 (+)
mia3 mia3 coding upstream 38534 23522887 ~ 23539844 (+)
hlx1 hlx,LOC102784911 coding upstream 183042 23391206 ~ 23395336 (+)
slc35f6 slc35f6 coding upstream 197164 23371884 ~ 23381214 (+)
kcnk3a kcnk3,LOC102784354 coding upstream 230022 23307723 ~ 23348356 (+)
slc35b2 slc35b2 coding downstream 279 23589968 ~ 23597399 (+)
rbm25b rbm25,LOC108233444,LOC103353665,LOC102789801 coding downstream 21320 23611009 ~ 23624138 (+)
atp6v1d atp6v1d coding downstream 51186 23640875 ~ 23644644 (+)
tmem121ab tmem121,LOC101465360,LOC102792477,LOC107377718 coding downstream 440364 24030053 ~ 24068592 (+)
nt5c1bb LOC104946496,LOC101163217,LOC103359106 coding downstream 617637 24207326 ~ 24215960 (+)
LOC120546283 NA non-coding upstream 71814 23475699 ~ 23506564 (+)
G186841 NA non-coding upstream 138858 23438240 ~ 23439520 (+)
G186843 NA non-coding upstream 143027 23435136 ~ 23435351 (+)
G186842 NA non-coding upstream 145995 23420899 ~ 23432383 (+)
G186747 NA non-coding upstream 302918 23268798 ~ 23275460 (+)
G186882 hsp90ab1 non-coding downstream 12947 23602636 ~ 23607535 (+)
G186901 mpp5 non-coding downstream 57890 23647579 ~ 23649568 (+)
G186902 mpp5 non-coding downstream 60707 23650396 ~ 23658430 (+)
G186905 gphn,LOC106608213 non-coding downstream 77248 23666937 ~ 23668127 (+)
G186954 NA non-coding downstream 239836 23829525 ~ 23861934 (+)
tcte1 NA other upstream 13949 23559498 ~ 23564429 (+)
rsph3 rsph3 other upstream 381382 23192638 ~ 23196996 (+)
ppp2r5a ppp2r5a other upstream 435738 23095912 ~ 23142640 (+)
dtl dtl other upstream 482873 23087820 ~ 23095505 (+)
si:ch211-22i13.2 NA other upstream 612368 22962033 ~ 22966010 (+)
G186975 NA other downstream 489914 24079603 ~ 24083104 (+)
LOC120547070 NA other downstream 555308 24144997 ~ 24146762 (+)
extl3 extl3 other downstream 565798 24155487 ~ 24187864 (+)
G187094 bpnt1,LOC102799416 other downstream 917224 24506913 ~ 24507813 (+)
lama2 lama2,LOC104942190 other downstream 1220390 24810079 ~ 25009457 (+)

Expression


Co-expression Network