LOC120546866 (LOC103363081,LOC108247050,LOC101159876,LOC107104461)


Basic Information

Item Value
gene id LOC120546866
gene name LOC103363081,LOC108247050,LOC101159876,LOC107104461
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 29861374 ~ 29875824 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782099.1
atgtgaGTGACCCTACGGTCTCTCCCATCTCCATCCGCGCCACAGCCACCACCATCCTCTGAGGTGTGTCTGCTGCCGCTGGAGCTCCATTCAGACACAGCCAGACATCCAGACGAGACAGACAGAGCGCCGGGACACCGACTGAAAACCACTCCCGTGTCTTTGTTCACACGGAACATGGCGTCAAAATGTCCCAAGTGCGACAAGACGGTGTATTTCGCGGAGAAGGTGTCATCCCTAGGGAAAGACTGGCACAAGTTCTGTCTGAAATGCGAGCGCTGCAACAAGACATTGAATCCAGGAGGCCACGCTGAGCATGATGGGACGCCTTATTGCCATAAGCCTTGCTACGCCGCCCTCTTCGGACCAAAAGGCGTGAACATTGGCGGAGCCGGTTCTTACGTGTACGAGGCTCCTGTCAACGAAGCCCCTGCGGCCGTTTCCATGGAAACAGATGCCAAACCAGAGGAGAAAAGAGCCCCCGCACGGGGACCTGTGAAGGctgcaagcttctcctctttctccggAGGACCCAACATCTGCCCCAGATGCAACAAGACGGTTTATTTCGcTGAGAAGGTGTCATCTCTGGGGAAGAACTGGCACCGGCCCTGTCTGCGCTGTGAGAGATGCAGTAAGACTCTGGCTGCCGGCAGCCACGCAGAGCATGATGGACAGCCATACTGCCACAAACCGTGCTACGCTGTGCTGTTTGGGCCCAAAGGTGTAAACACTGGCGGCGTCGGCAGCTACATCTACGACGAGCCTGCTGAAGCCGAGGCCCAGCCCTGAGCCCTGACGCTGCCTCCGACGCCTCCAGGACCCTCCATGGTTTGCCTTCTACAGTCACACAGGTGACGGATGATATGTACTGCGATCACAGGGATGGATATTTAGATGTTTCcgttgtatttgtatattgtttatatatctATTTTTTTGTACTGATACTAGCCTTTGACATGTCCTCCCATGTGAGTTTTAAGATTTGCCTTTCAGTTTCTTGGTTCTCTTTGCCAAATAATTATTATGTAGTAGATTAAAGCGCCTGCGTCACTCATGATTAATAGTTTTTCAGACTTTTGTGCACTTACgaaatgtactgtatgaaaCGTACAAGTCCCACCAATTTATTGTCAGTGTTTGTTGAACATGGTTCTAAAATATTGGGATGAGTTGTAGACGTAGTTGCACGCACAGAAGACGTGAATTTTACTGAATGTTATGAAGTTTGGGGTCTGTTGGGAACAAAAAGTGGTCAACTGTGCATCGCATTTTCTACAGTAAAACTGTGTGGTACCAAACTTG

Function

NR:

description
PREDICTED: cysteine-rich protein 2-like

GO: NA

KEGG:

id description
K24413 CRIP2_3, CRP2_3; cysteine-rich protein 2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782099.1 True 1308 mRNA 0.50 9 29861374 29875824

Neighbor

gene id symbol gene type direction distance location
LOC120546480 NA coding upstream 490224 29315759 ~ 29371150 (+)
slc30a2 slc30a3,LOC102796772 coding upstream 640647 29196169 ~ 29220727 (+)
LOC120547117 gpr31,LOC104934219,LOC104957175 coding upstream 936611 28917291 ~ 28924763 (+)
gpr31 NA coding upstream 954994 28902376 ~ 28906380 (+)
LOC120547119 NA coding upstream 988771 28866213 ~ 28872603 (+)
LOC120546867 NA coding downstream 1097 29876921 ~ 29882724 (+)
LOC120546870 NA coding downstream 19601 29895425 ~ 29943833 (+)
LOC120546436 NA coding downstream 136331 30012155 ~ 30022642 (+)
LOC120546869 NA coding downstream 153126 30028950 ~ 30083063 (+)
zfand3 zfand3,LOC104930467,LOC103365830,LOC101473384,LOC100698322,LOC106531772 coding downstream 224135 30099959 ~ 30115805 (+)
LOC120546865 NA non-coding upstream 67695 29787961 ~ 29793679 (+)
LOC120546861 NA non-coding upstream 200639 29659256 ~ 29660735 (+)
G188290 NA non-coding upstream 256275 29579635 ~ 29605099 (+)
G188288 NA non-coding upstream 283272 29576224 ~ 29578102 (+)
G188281 NA non-coding upstream 322922 29538175 ~ 29538452 (+)
LOC120546868 NA non-coding downstream 11040 29886864 ~ 29888884 (+)
G188321 NA non-coding downstream 53018 29928842 ~ 29985502 (+)
G188323 NA non-coding downstream 56726 29932550 ~ 29932860 (+)
LOC120546875 NA non-coding downstream 58770 29934594 ~ 29935486 (+)
LOC120546873 NA non-coding downstream 64382 29940206 ~ 30035201 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other upstream 215551 29645254 ~ 29645823 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other upstream 397500 29461849 ~ 29463874 (+)
G188207 clvs2,LOC107675107 other upstream 440647 29419376 ~ 29420727 (+)
si:ch211-245h14.1 NA other upstream 549010 29292705 ~ 29312364 (+)
G188167 ucn other upstream 724457 29134171 ~ 29136917 (+)
btbd9 btbd9 other downstream 208724 30084548 ~ 30097239 (+)
angel2 NA other downstream 449148 30324972 ~ 30336202 (+)
G188352 NA other downstream 735857 30611681 ~ 30882446 (+)
LOC120546905 NA other downstream 918395 30794219 ~ 30812452 (+)
hivep2a LOC103373864 other downstream 1293243 31169067 ~ 31309396 (+)

Expression


Co-expression Network