LOC120546867


Basic Information

Item Value
gene id LOC120546867
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 29876921 ~ 29882724 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782100.1
TTGAGATAACGCAGCGCTACTTCTGCTTTAACAACACGCTCACTAGGACCGACGCCATCTCGGAATAAGGGACGTCTATAGGGTGTTTTTGGAAGCAGAAAATATTCAAATACCACAAGTTGACTTTCAGAAATTTCTGGGGAAATATAACGTTTTATTCGTTTAGTAATTCTTTCTGCGTCTGCGGATAAGAAAGTGTATCAGCCGCCCTCGAAGAAGtagcttaacgttagctaactgttAGCTTGTGACGTAGTTAGCTAAACTAGCTAACTTAACCGCGGAGGAATTTCACAGCCTGTTTATGTTTTCGCCAGTTCGAAAAAATGTTGGACGGATCCCCGACTCACGGTGATGAAACGAACATCGGTAACGTCGAAAACAACAACCCGATATCGTTGATAAGCAGCGATGGGGTGAACAAGACGAGACAGGCGCTGCTGAAGAAAGGGAGGAAGCTGCGGTCGACGGCGCCACTGCATCACCAGAAACCTCCGAGAAACATCCCCAACATCCGTCTGTccgaccacaacaacaacaacactttaTCTGCTAACAAACCAGCAGCTCAGCCCGGTACCGAGCTGCCTCTCGGTACACAGGCCGTGCTGACCCTCCATCATCTCAACCAGGGACCCAGGACAGAGCTGCTGAAATCCAAAGGCGGCAGGTCGGAGCAAGGAGCCGCACAGCCCGGTGGCCAACCCGGCCGCAACCAGCCCCGACAGGACCGAATCGCCCAGAACATGATCACGCGGAGCCACAAGCCCAAGCAGGGCCAAACCCCCGCAGCCTCCCGCTCCGCTAAGAGGAAAGAGACGGGCAGCCCGAACAAGCCCCACCCTCGCCACCAGCCTCCGCCCCGAGAGCACAACCAACCCCTCCGCGCCTTCGACGCTGCGCCGGTCGCGAACACGCCGCCTGCCGAAGCCGCGCCCGAATACCTCAAAGACGGCGAGAAGGTCTACGCCGGGGCCAAGTTCAGCGAGCCGCCGTCGCCGAGCGTCTTGCCCAAACCGCCCAGCCACTGGGTCGGAGAAAACGAGCCTCAGCCGAGCGACCGGAGCCGAGAGCAAATGACTGTTCATCTCAAGTCGCTGCTGAAGGTTCAGGAGAAGTCATGACCACGTCTGCTGTCGCATCCACGCTTGAATGCCAACAATTGGAAAACAGGCATTCATGTAAAAAATGTAGTTTGGCCTTTTAAACACACTGAAATACAATCTAGGGAGTTTTTTTATTAACTGTAGTACAATTTCTCATGATTCAACATGCTGCCTGCATTTGTAAACATTTTGACGCCGCGTTGTTGCTGGACATCTgactaaacaaatattttctgCCGGCATGTCGGCAGAGTAAAAGagaaaatgtttgtgattggaTTTGTGTACTAGGAAGTCGTCTCCAGCAGCAACGCGATCAGCGCCTAATGGTTACATAGTGCAAAGTGATTTTTTTACGCTATTGAAAAGGCagttttgtgttgattttttttccaagagCTAGTGCAAATGTACATAATATAttgtaaacatacatgtgtgtatatttctCCTTGTTATTTTTAACTGAGATTCTAGTTTTGTTACTGAggtttttccaaaaaaaacaaaacaaaaaaaaacaagaaaaaagaaagaggaaaaatatCCCCTGCAAACTGAGGCGCTTTGTTACAGCTTCTTCAGCGTGAGGCTCAGTGGAAGCACGAAAAGACTTTTCTATCTGATTTGCACTGAAAATCAGGGGGAAGGGCAGGGAACCTTTCGATTTTTATCCAAACGCTTGACCAGCCACTTTGATGACTTCATCAGCCTTCGTCGAGCACAGGAGAGCACTTCCGGGTTCCCGGCTGGCGGGGCGCCTTTTCAAAATGGCTCAGCCAGCGGACAAATCACAAAGTCCGAATTTACCATCCGGTCGCTGAAGTTCTTTCCCTTCCCCCGAACACGGGTCCAGCCTGGTGGAAAGCCACGGGTGGAATCAGGGACCGTGAGGCCGCCGAAGCCTCGCTCACAAACTGAAGAGAAATGTGAAAAGTCTCACGACCAGCTGCTGCACAAAAAAGCCAGTATCCAGCATCAAGACCATGTGctgctgcttcttttttttatctttattgcaCTGACTCCAAGTCAGTCACATTAAGCTGTCTACATTTGAAATATCTTTTTCTCGTCTGTCCACACAGCCGGTGTATTTCACACCCCCAAAACAGATTTTTCATTCAGATTTCATGTTGTGCGTGTACGGGTGAAACTGAACTTGACATACATTACATTAGCCTGGCCCGGTCGTGGCTGAGGATTGTGAGGCATTAAGAAAGACAATCTTCTGTCCCCTCCAGCTTTCTCTGTGATCATAATGGTCAATACTGGCGATCGCCAACACCGCTTTTTGACAGAAGATGTCACGATTAGAAGTAGTCGATTGCCTCAAAAGCTACCTGCAGCTCTTTTGATAATCTATTAAATGTTTGCGTCATTGCctaagcaaaaaaaagaagaaaaaaaagccaagCATTTGCTGGTTCCAAcgtctaaaatgtgaggattttctaTTTTATGTCATCTAAGTATGTTTGGATTTTGGACTACTTTGTGGCATTTTAGGCAATAATAATGAGAAACTATGGGCTAATCGACAatgaaatgaatcattagttGTACCGTTGGACATAATCATAAAATAATGACATGCAGTGAACATGTAGCATTTATTATATACTAGTTATACCATTATCTGGCAGTAAAAACAGGTAAACGCAAGTGAGGACAACTAAATGGTGACTTTGGCTGTTTTCAAACGGCCATATAGGTGATCACGGAGAGCAGGAGGGGACAGAAAACAGGTTTAAAAGATGTTAATGTTTGTCCCGCTCTCTACCAGATGGTAGAGGTACGAGAAGAAGCTGTTTTTGTGTTATTCAGGTGTTTCAGGATGGACGGCACGCAAACAAGCGCTCATGTGGACGCACATAAAACTGCCTTTTTAAAGATTGTATGGCTTCATGTGGATGTAGTTTCTGTATGTTAGACTGTATGTTGTGTCTTTTAAAGGGGACTCGGTTCCACACACTTcgttttcatttctttaaggTAATTTAACGCACGTCAATGTTTACCGAGAGTGCGGGACGTGTTCCGTTTTGGCACAGATGATCTTGTGATTGTGTACGACGtgttcttttgtttcttctgGATGGTTTCCAGGGATGCAGGCAGCTGCTGGATCTTGTTTTCTTGACCTCTGTGACGTCACGCGAGTGGGAAATTGTATTACTGTATCAAAAACTGCCCATTTTTATGACAGTGTTTTAAAAAGATGATTTCATTCCAGTTATGAGAACATGCTAAACGAGGCACCTCCATGCCACAATTtggatggggaaaaaaagtttattttatgAAGTCTTTCATATCTAaattaaaaattattaaaatattggTTACCCCTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782100.1 True 3465 mRNA 0.46 2 29876921 29882724

Neighbor

gene id symbol gene type direction distance location
LOC120546866 LOC103363081,LOC108247050,LOC101159876,LOC107104461 coding upstream 1097 29861374 ~ 29875824 (+)
LOC120546480 NA coding upstream 505771 29315759 ~ 29371150 (+)
slc30a2 slc30a3,LOC102796772 coding upstream 656194 29196169 ~ 29220727 (+)
LOC120547117 gpr31,LOC104934219,LOC104957175 coding upstream 952158 28917291 ~ 28924763 (+)
gpr31 NA coding upstream 970541 28902376 ~ 28906380 (+)
LOC120546870 NA coding downstream 12701 29895425 ~ 29943833 (+)
LOC120546436 NA coding downstream 129431 30012155 ~ 30022642 (+)
LOC120546869 NA coding downstream 146226 30028950 ~ 30083063 (+)
zfand3 zfand3,LOC104930467,LOC103365830,LOC101473384,LOC100698322,LOC106531772 coding downstream 217235 30099959 ~ 30115805 (+)
galnt14 galnt14,LOC103365833,LOC102790467 coding downstream 242739 30125463 ~ 30323344 (+)
LOC120546865 NA non-coding upstream 83242 29787961 ~ 29793679 (+)
LOC120546861 NA non-coding upstream 216186 29659256 ~ 29660735 (+)
G188290 NA non-coding upstream 271822 29579635 ~ 29605099 (+)
G188288 NA non-coding upstream 298819 29576224 ~ 29578102 (+)
G188281 NA non-coding upstream 338469 29538175 ~ 29538452 (+)
LOC120546868 NA non-coding downstream 4140 29886864 ~ 29888884 (+)
G188321 NA non-coding downstream 46118 29928842 ~ 29985502 (+)
G188323 NA non-coding downstream 49826 29932550 ~ 29932860 (+)
LOC120546875 NA non-coding downstream 51870 29934594 ~ 29935486 (+)
LOC120546873 NA non-coding downstream 57482 29940206 ~ 30035201 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other upstream 231098 29645254 ~ 29645823 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other upstream 413047 29461849 ~ 29463874 (+)
G188207 clvs2,LOC107675107 other upstream 456194 29419376 ~ 29420727 (+)
si:ch211-245h14.1 NA other upstream 564557 29292705 ~ 29312364 (+)
G188167 ucn other upstream 740004 29134171 ~ 29136917 (+)
btbd9 btbd9 other downstream 201824 30084548 ~ 30097239 (+)
angel2 NA other downstream 442248 30324972 ~ 30336202 (+)
G188352 NA other downstream 728957 30611681 ~ 30882446 (+)
LOC120546905 NA other downstream 911495 30794219 ~ 30812452 (+)
hivep2a LOC103373864 other downstream 1286343 31169067 ~ 31309396 (+)

Expression


Co-expression Network