pinx1 (LOC102299901)


Basic Information

Item Value
gene id pinx1
gene name LOC102299901
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17919578 ~ 17949445 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782196.1
TCAGTTGTTCTCAACATGAGTTTAAAACATTGCTTCTGCTCTGATTTCCGTAATATTGACAGTTGTCAGCCGTTGTTTTTACATGCACACGACACCTCATTGTCATGTGCACCCCGATGTTTTGACCAAGTGACCATATCACTATACTCCCGGAGGAAACAGAAGTGGTCTGTTGACCCCAGGAACAGCGCCTGGAGTAAGGATGACTCCAAATTCGGTCAGAAGATGCTGGAGCGAATGGGCTGGTCCAAGGGCAAGGGCCTGGGCAGAAGTGAGCAAGGCTCCACTGACCATATCAAAGTAaaacttaaaaacaacaactatgGTCTTGGAACCAGTGCCAGCTATGAGGATAACTGGATTGCCCACCAAGATGATTTTAATGAGCTGCTTGCTCAACTGAACAACTGCCATGGTCAAAACAGCGGCACTGAACCTCCACCACCAGAGGAGCCGAAAGGATTCAGCTTGGAAGAGAAGTCCAAGACCTCCAAAAAGAGGGTCCATTACATGAAGTTCACTAAGGGAAAGGACCTGTCCTCCCGCAGTGAAACAGACCTTAACTGTATCTTTGGGAAAAGAGGAAGATCTGCCAATGACAAAGAGCAGGAGAGCAACAGCAATGATTCTCAGGGTGAGACAGAGAGTTTTACTCCTGCTGCCTTTGAACTGGATACAGAGTCAATCACCAATACTGTGAAAAGTACTCTAACTATGCAGGAGTATTTTGCACAGCGAATGGCTCAGTTGAAAAAGGCTCGTGGACAGGACCAGAGTACAGCTCCCTCAGTGGAGACCAACGAGACATCTGGTCCATCTGAGGAACCCAGTCCCATCCTCATCAGCGACAATGAGTCGGAAGAgtccaaaaagaaaaagaagaaaaagaagagcaaaaagtCATCTTATGAGCTGGAAGTGATTGAAGAGAACAGTACTGCTGCTCCTATCATAATAGTGGACGATGAGGACGAACAGCAGGAGCGTTcggggaaaaagaagaaaaagaggaaaattgTAGAAAGCGAAGGAGCTACAAATGAGAACTGTAGCTCCACCTCTGGTGTGGAGCAGAACTGTGAGGAGTTGCCTCCgtcgaagaagaagaagaagaagcttaAAAAACACCATAAGGAAACTGAGCTTCTAAATGGACACGGACCAGCTGAGGATCAAACTGTAGAATCTGAGGTTGTtcacaaaaagaagaagaaacaacgAGAGGAGGTGAACGATGTAGTTAAAGAGAATGAGGAGGAGCTGGTACAGAAAAAATCCAAAAaggacaagaaaaagaaaaagaaatgtcatGAATAGGATGAAATTAATAGAATGGCATCTAATGCCACCCATGATCATGGGGGCACATGTGTACCAAGTGATTGCCTTAAATGTCTTGTATACATATAGTCTAATAACCTTAGACATTtgatcacataaaaaaaaactgtctacAATGTATTCATACAGACATAAGTTGGCATTCTTTCTTAAATGATTCCGTTTTCCATGAAATTTAGAAATAATTGGATGAGTGCTGCCATGTGTCTCttaatgaataaaatgtatccaaattgcttaattatttttgttgttttgaaaactatattttttttttcttcaaatgccaTCATTTATGTCTTACCACCTTATATGCATCATCATTACTATTTATTTAGCATTCAAAGTGGATTTTACTTTCTTGCCAGCAATTAGTTTAACCATCTTATTCCAGTTCTTCAGACAATGGATATCTCCTATAATGAAAGTGACCCAGAGACAGTTTTGTTAGTTTTGCAAAAACAACAGAAGCCCACAGACATTAGTGGTCTTCTTGATGCGATAAAACTTGACAAATATGAACAGATGTCATTTCTTTGTCTGACAAATTTATGAGCCGTTTGAAAACTGACAAACTCTGGTGCTTTAAATCAaatcccttcttttttttttttttaaataaatccaaAATTTCAATGCA
>XM_039782197.1
ATGTTTACGACATACACAACCAGCGTGGTCATATTATCCATGGGTCATATTGTCTTCAGGCATTTTCTGGGATACCCTACGCAACTTGCGTCAAGCTGTTTAAGGACCACAGAATGTCCATGCTTGCTGAACCCCGGAGGAAACAGAAGTGGTCTGTTGACCCCAGGAACAGCGCCTGGAGTAAGGATGACTCCAAATTCGGTCAGAAGATGCTGGAGCGAATGGGCTGGTCCAAGGGCAAGGGCCTGGGCAGAAGTGAGCAAGGCTCCACTGACCATATCAAAGTAaaacttaaaaacaacaactatgGTCTTGGAACCAGTGCCAGCTATGAGGATAACTGGATTGCCCACCAAGATGATTTTAATGAGCTGCTTGCTCAACTGAACAACTGCCATGGTCAAAACAGCGGCACTGAACCTCCACCACCAGAGGAGCCGAAAGGATTCAGCTTGGAAGAGAAGTCCAAGACCTCCAAAAAGAGGGTCCATTACATGAAGTTCACTAAGGGAAAGGACCTGTCCTCCCGCAGTGAAACAGACCTTAACTGTATCTTTGGGAAAAGAGGAAGATCTGCCAATGACAAAGAGCAGGAGAGCAACAGCAATGATTCTCAGGGTGAGACAGAGAGTTTTACTCCTGCTGCCTTTGAACTGGATACAGAGTCAATCACCAATACTGTGAAAAGTACTCTAACTATGCAGGAGTATTTTGCACAGCGAATGGCTCAGTTGAAAAAGGCTCGTGGACAGGACCAGAGTACAGCTCCCTCAGTGGAGACCAACGAGACATCTGGTCCATCTGAGGAACCCAGTCCCATCCTCATCAGCGACAATGAGTCGGAAGAgtccaaaaagaaaaagaagaaaaagaagagcaaaaagtCATCTTATGAGCTGGAAGTGATTGAAGAGAACAGTACTGCTGCTCCTATCATAATAGTGGACGATGAGGACGAACAGCAGGAGCGTTcggggaaaaagaagaaaaagaggaaaattgTAGAAAGCGAAGGAGCTACAAATGAGAACTGTAGCTCCACCTCTGGTGTGGAGCAGAACTGTGAGGAGTTGCCTCCgtcgaagaagaagaagaagaagcttaAAAAACACCATAAGGAAACTGAGCTTCTAAATGGACACGGACCAGCTGAGGATCAAACTGTAGAATCTGAGGTTGTtcacaaaaagaagaagaaacaacgAGAGGAGGTGAACGATGTAGTTAAAGAGAATGAGGAGGAGCTGGTACAGAAAAAATCCAAAAaggacaagaaaaagaaaaagaaatgtcatGAATAGGATGAAATTAATAGAATGGCATCTAATGCCACCCATGATCATGGGGGCACATGTGTACCAAGTGATTGCCTTAAATGTCTTGTATACATATAGTCTAATAACCTTAGACATTtgatcacataaaaaaaaactgtctacAATGTATTCATACAGACATAAGTTGGCATTCTTTCTTAAATGATTCCGTTTTCCATGAAATTTAGAAATAATTGGATGAGTGCTGCCATGTGTCTCttaatgaataaaatgtatccaaattgcttaattatttttgttgttttgaaaactatattttttttttcttcaaatgccaTCATTTATGTCTTACCACCTTATATGCATCATCATTACTATTTATTTAGCATTCAAAGTGGATTTTACTTTCTTGCCAGCAATTAGTTTAACCATCTTATTCCAGTTCTTCAGACAATGGATATCTCCTATAATGAAAGTGACCCAGAGACAGTTTTGTTAGTTTTGCAAAAACAACAGAAGCCCACAGACATTAGTGGTCTTCTTGATGCGATAAAACTTGACAAATATGAACAGATGTCATTTCTTTGTCTGACAAATTTATGAGCCGTTTGAAAACTGACAAACTCTGGTGCTTTAAATCAaatcccttcttttttttttttttaaataaatccaaAATTTCAATGCA
>XM_039782198.1
TTTCTTTTAGAGTTTTGACGGATATTTCCCTGTTTTTTTCACTGTAACAATGTTAATTTATATGTTTTGTGTTCGCTAAAACCCGCCGCAACCAGCTATCGAGAGGCTTTCTTCCGAAACCCGGAGGAAACAGAAGTGGTCTGTTGACCCCAGGAACAGCGCCTGGAGTAAGGATGACTCCAAATTCGGTCAGAAGATGCTGGAGCGAATGGGCTGGTCCAAGGGCAAGGGCCTGGGCAGAAGTGAGCAAGGCTCCACTGACCATATCAAAGTAaaacttaaaaacaacaactatgGTCTTGGAACCAGTGCCAGCTATGAGGATAACTGGATTGCCCACCAAGATGATTTTAATGAGCTGCTTGCTCAACTGAACAACTGCCATGGTCAAAACAGCGGCACTGAACCTCCACCACCAGAGGAGCCGAAAGGATTCAGCTTGGAAGAGAAGTCCAAGACCTCCAAAAAGAGGGTCCATTACATGAAGTTCACTAAGGGAAAGGACCTGTCCTCCCGCAGTGAAACAGACCTTAACTGTATCTTTGGGAAAAGAGGAAGATCTGCCAATGACAAAGAGCAGGAGAGCAACAGCAATGATTCTCAGGGTGAGACAGAGAGTTTTACTCCTGCTGCCTTTGAACTGGATACAGAGTCAATCACCAATACTGTGAAAAGTACTCTAACTATGCAGGAGTATTTTGCACAGCGAATGGCTCAGTTGAAAAAGGCTCGTGGACAGGACCAGAGTACAGCTCCCTCAGTGGAGACCAACGAGACATCTGGTCCATCTGAGGAACCCAGTCCCATCCTCATCAGCGACAATGAGTCGGAAGAgtccaaaaagaaaaagaagaaaaagaagagcaaaaagtCATCTTATGAGCTGGAAGTGATTGAAGAGAACAGTACTGCTGCTCCTATCATAATAGTGGACGATGAGGACGAACAGCAGGAGCGTTcggggaaaaagaagaaaaagaggaaaattgTAGAAAGCGAAGGAGCTACAAATGAGAACTGTAGCTCCACCTCTGGTGTGGAGCAGAACTGTGAGGAGTTGCCTCCgtcgaagaagaagaagaagaagcttaAAAAACACCATAAGGAAACTGAGCTTCTAAATGGACACGGACCAGCTGAGGATCAAACTGTAGAATCTGAGGTTGTtcacaaaaagaagaagaaacaacgAGAGGAGGTGAACGATGTAGTTAAAGAGAATGAGGAGGAGCTGGTACAGAAAAAATCCAAAAaggacaagaaaaagaaaaagaaatgtcatGAATAGGATGAAATTAATAGAATGGCATCTAATGCCACCCATGATCATGGGGGCACATGTGTACCAAGTGATTGCCTTAAATGTCTTGTATACATATAGTCTAATAACCTTAGACATTtgatcacataaaaaaaaactgtctacAATGTATTCATACAGACATAAGTTGGCATTCTTTCTTAAATGATTCCGTTTTCCATGAAATTTAGAAATAATTGGATGAGTGCTGCCATGTGTCTCttaatgaataaaatgtatccaaattgcttaattatttttgttgttttgaaaactatattttttttttcttcaaatgccaTCATTTATGTCTTACCACCTTATATGCATCATCATTACTATTTATTTAGCATTCAAAGTGGATTTTACTTTCTTGCCAGCAATTAGTTTAACCATCTTATTCCAGTTCTTCAGACAATGGATATCTCCTATAATGAAAGTGACCCAGAGACAGTTTTGTTAGTTTTGCAAAAACAACAGAAGCCCACAGACATTAGTGGTCTTCTTGATGCGATAAAACTTGACAAATATGAACAGATGTCATTTCTTTGTCTGACAAATTTATGAGCCGTTTGAAAACTGACAAACTCTGGTGCTTTAAATCAaatcccttcttttttttttttttaaataaatccaaAATTTCAATGCA

Function

NR:

description
PIN2/TERF1-interacting telomerase inhibitor 1 isoform X1

GO:

id name namespace
GO:0043086 negative regulation of catalytic activity biological_process

KEGG:

id description
K11135 PINX1; Pin2-interacting protein X1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782196.1 True 1981 mRNA 0.41 7 17920052 17949445
XM_039782197.1 False 1965 mRNA 0.41 7 17919578 17949445
XM_039782198.1 False 1952 mRNA 0.40 7 17919719 17949445

Neighbor

gene id symbol gene type direction distance location
tdh LOC108242421,LOC106524872,LOC104962272,LOC104922441 coding upstream 6548 17906741 ~ 17913030 (+)
mtmr9 mtmr9 coding upstream 15065 17888641 ~ 17904513 (+)
fam167ab fam167a,LOC102799533 coding upstream 110886 17800090 ~ 17808692 (+)
lca5 LOC104965141 coding upstream 119630 17791853 ~ 17799948 (+)
eya4 eya4 coding upstream 161164 17709799 ~ 17758414 (+)
sox7 sox7 coding downstream 3114 17952559 ~ 17955598 (+)
LOC120546768 NA coding downstream 26668 17976113 ~ 17993998 (+)
blk blk,LOC102291483,LOC102797075 coding downstream 52625 18002070 ~ 18011951 (+)
atraid atraid coding downstream 223724 18173169 ~ 18177104 (+)
nme6 nme6 coding downstream 245038 18194483 ~ 18198503 (+)
G185156 NA non-coding upstream 154786 17763969 ~ 17764792 (+)
G185155 rps12 non-coding upstream 155842 17760676 ~ 17763736 (+)
LOC120546941 NA non-coding upstream 231298 17686696 ~ 17688280 (+)
LOC120546942 NA non-coding upstream 248101 17669166 ~ 17671477 (+)
G185136 NA non-coding upstream 257765 17640961 ~ 17661813 (+)
G185254 NA non-coding downstream 107966 18057411 ~ 18059367 (+)
G185258 LOC104959833,LOC107082730,LOC103138645,LOC106923247,LOC106920026 non-coding downstream 153580 18103025 ~ 18104904 (+)
LOC120546825 NA non-coding downstream 206525 18155970 ~ 18164654 (+)
G185323 NA non-coding downstream 231687 18181132 ~ 18181983 (+)
G185353 NA non-coding downstream 348418 18297863 ~ 18298151 (+)
G185237 NA other upstream 2330 17916853 ~ 17917248 (+)
LOC120546940 NA other upstream 225944 17674393 ~ 17693634 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other upstream 233180 17669172 ~ 17686398 (+)
map7b map7,LOC107374525 other upstream 544519 17341837 ~ 17375059 (+)
G184996 sec63 other upstream 623877 17293654 ~ 17295701 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other downstream 71511 18020956 ~ 18054926 (+)
znf513a znf513,LOC102795572 other downstream 177686 18127131 ~ 18140260 (+)
ylpm1 ylpm1 other downstream 648920 18598365 ~ 18635052 (+)
LOC120547227 LOC104932566,LOC103364615 other downstream 756411 18705856 ~ 18711994 (+)
LOC120546624 prox1 other downstream 1254709 19204154 ~ 19237033 (+)

Expression


Co-expression Network