LOC120547023 (LOC103357708,LOC100700775,LOC101482519,LOC105938917,LOC107377760)


Basic Information

Item Value
gene id LOC120547023
gene name LOC103357708,LOC100700775,LOC101482519,LOC105938917,LOC107377760
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 27072970 ~ 27407359 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782373.1
ATGCAGGCCAAGAAGCGGTACCTGCTCGTGTCTGTGGGGGCCGGTCTTCTCTTCCTCGTCTACCTGTGGGGTCTGCAAATCGGGGAGTTCCAGCAGCAGCCGTACCAATATCATCAGTTGCCCCAGTACCCCCAATACCACCAGTACCCCCAGCAGGAGTACCAGTACTACCACCAGAGCCAGGAGGTGTACCAGCCCCTGCCCCAGAGAAGCCCGTCCAGACCTTCCAGGCACTGGCCTGAGTCCACCCAGCTGCTGGAGCCGTACCTGGAGGGGGGAGAGCAAGAGgAGGACAGCCCCCAGCTCCATCACCAGCACACCTCGCCTCGCGAACGGCGTGCGATCCGCGACAACATCTACAAGAACAAGCGCTGCCGCATGGAAACCTGCTTCGACTTTGCACGCTGCCAGTCGGGTTTCAGGGTCTACATCTACCCCGCGCAGAGAGGGGACGAGATCTCCGAGACCTACCAGAAGATCCTGTCGTCCATCGAGGAGTCTCGCTTCCACACCACGGACCCCGCGCGGGCCTGTCTGTTCATTCTGGCCGTGGACACGTTGGACCGGGACCAGCTCTCGGCTCAGTACGTCCAGAACGTCCGACTCCGAATCCAGAGCCTACCGACGTGGAACGATGGCAGGAACCACCTCATATTCAACCTCTACTCCGGCACCTGGCCGGACTACACAGAGGATCTGGGCTTCGAGGTGGGCCAGGCCATGCTGGCCAAGGCCAGCGCAGATGTGGTCAACTTCCGACCCAACTTTGATATCTCCATCCCTCTGTTCTCCAAGGATCACCCGCTGAAAGGAGGGGGCATAGGTTATCTGACGCTCAACGATGCGCCGCCTTCCAGGAAGTACCTGCTTGTTTTCAAAGGGAAGCGTTACCTAACGGGCATCGGTTCTGAGACGAGGAATGCTCTGTATCACATCCACAACGGGGAAGATATTATTCTGCTGACCACGTGTAAACATGGCAAGGACTGGGAGAAACACAAGGACTCTCGCTGCAACAGAGATAATGAAGAATACTCAAAgtTCGACTACCAGGAGCTGCTCCATAACTCCAGTTTCTGCCTGGTGCCACGGGGCCGACGTCTTGGATCCTTCCGCTTCCTAGAGGCCCTgcagGCTGCTTGTATCCCGGTTATTCTGAGTAACGGCTGGGAGCTTCCCTTCTCTGAAGTCATCGACTGGAGAAAAGCCGCCATCATTGGAGATGAGAGACTCCTgttacaggtTCCCTCCATTACCCGGTCTGTGGGCCGTGACAGGATCTTGGCTCTCCGCCAGCAGACTCAGTTCCTCTGGGATGCCTACTTTTCTTCTGTAACCAAAATCGTCTTAACTACTCTGGAGATCATCCATGACCGTGTGGACTCCCATGTGTCCAGAAACCGGTTGTTGTGGAATTCTCTACCTGGTGGTCTCTATGCACTCCCCCAGTACTCAACTGACCCTGCccagtttcctttttattatgCCATACTGGggaaGAGCCCGTCGCAGCAGTTCACAGCTGTGATCCATACGGTTACTCCTCTGCAGTCCCAGATTTCCCCCGTGGTGAGGCTCATCATCGCTGTAGCCAAGTCCAAGTTCTGTGCACAGATTGTGGTTTTATGGAACTGCGACCAGCCTTTACCTCCTAGGAACAAGTGGCCCTCCACCAGTGTGCCTCTCACTGTCATTGAAGGACAGACCAAGACGATGAGCAGTCGTTTTTCCCCCCATGACGTCATCCTCACTGATGCCGTTCTCAGTCTGGATGAAGACTCGGTTCTCTCAACAAACGAGGTGGATTTTGCCTTTCTTGTATGGCAAAGCTTTCCAGAGCGTATCGTTGGTTATCCAGCAAGGAGTCACTACTGGGATAGTTCCAGATCCCGATGGGGCTACACGTCCAAATGGACCAATGACTACTCCATGGTCCTTACAGGGGCAGCTTTCTACCACAGATACTACCACTACCTGTTCACCCACTACGTCCCTGCCAGCCTGCTGACCATGGTGGACCACATGGCTAATTGTGAAGACATCCTGATGAACTTCCTGGTGTCGGCCGTTACCAAGCAGCCGCCAATCAAAGTCACACAGAAGAAACAGTACAAGGAAACCATGATGAGCCAGGGCTCCAAGTCGTCTCGGTGGGCCGACCCAGACCACTTTGCCCAGCGACAGACCTGCATGAACGCCTTCAGTCACTGGCTGGGTTTCATGCCCCTGGTGCACTCCCAGATGAGGCTGGACCCTGTGTTGTTCAGGGACCAGGTTTCCATCCTGAGGAAGAAATACAGGGACATTGAAAAACTGTGAATGCACAAGGATACACACCCAATCATTGTGTGAGATCCAGAGGCCGTGACAAGAATCCACACACTGAACGTGAACATTTGTGAGGCTATAAAGGAAAACTCACACATGGACACTGGAcataaaaatgataaaacacTGAGGTACGCATAAGGCATTTAACTGCGTAtttctatttaaaaataaaatgcggGGGTTGATAACCGTTAGTGATACCCGCCATCTGTGACAagatacataaatataaatgcaTGGATACACATGCAACAAAGACCTGGACAAATTTAATACAGTCCTGACCACAGACATACATGTGTTGCATGGTTTGAACATGACAGCTGTACGAGGAccagaaaaatgtgtttgaatgaaaaaaagaaaatctaagaGCAATGTTTATATGGAAGTTGGACTGTTGGCAGTTAAGGCGTATATAGAGTAATGTTGGACAAAAGATAAAGATATTTATGGATTATAGATTGTATTCATAAAGTCAAAGGACACACTCTGGGGTATGTACAGTAAAGACACATTGTGGACAAAAGAGACAAACTAGCTTCTGGGTCAGGCCACGTGCTACCCCAAAACACCCAGAGACAATGGCAACATGCCTCTTGTATACTATTGTagattttcagcagcagttccTGTCTGTatgaagcaaataaaaaataaaataaagagatgTTATGAGACAAGAGGCCAGGTCTCAACAGCATTTACTTGATTCCTTCCA

Function

NR:

description
PREDICTED: exostosin-1-like

GO: NA

KEGG:

id description
K02366 EXT1; glucuronyl/N-acetylglucosaminyl transferase EXT1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782373.1 True 3052 mRNA 0.51 12 27072970 27407359

Neighbor

gene id symbol gene type direction distance location
trnat-cgu_2 NA coding upstream 91177 26981721 ~ 26981793 (+)
esco2 NA coding upstream 167727 26896380 ~ 26905243 (+)
tmem214 tmem214 coding upstream 194392 26860070 ~ 26878578 (+)
LOC120546589 mapre3 coding upstream 216077 26843772 ~ 26856893 (+)
LOC120546590 NA coding upstream 230416 26831828 ~ 26842554 (+)
c18h1orf131 NA coding downstream 65857 27473216 ~ 27478075 (+)
LOC120547108 NA coding downstream 142075 27549434 ~ 27553027 (+)
sprtn NA coding downstream 145752 27553111 ~ 27558019 (+)
fam89a fam89a,LOC104954304 coding downstream 157617 27564976 ~ 27569270 (+)
ttc13 ttc13 coding downstream 185151 27592510 ~ 27617141 (+)
G187693 NA non-coding upstream 150732 26921883 ~ 26922238 (+)
G187692 NA non-coding upstream 154685 26916692 ~ 26918285 (+)
trnaa-agc_23 NA non-coding upstream 182614 26890284 ~ 26890356 (+)
G187672 NA non-coding upstream 184666 26887707 ~ 26888304 (+)
trnaa-agc_22 NA non-coding upstream 185764 26887134 ~ 26887206 (+)
G187770 NA non-coding downstream 79805 27487164 ~ 27487422 (+)
G187772 NA non-coding downstream 97247 27504606 ~ 27504987 (+)
G187773 NA non-coding downstream 98947 27506306 ~ 27506587 (+)
G187774 trim67,LOC102787511 non-coding downstream 121715 27529074 ~ 27529765 (+)
G187779 NA non-coding downstream 124818 27532177 ~ 27575713 (+)
LOC120546215 LOC104930085 other upstream 34742 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 335167 26695430 ~ 26737803 (+)
G187574 NA other upstream 387463 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 620605 26438486 ~ 26452365 (+)
tfap2d tfap2d other upstream 641573 26413691 ~ 26431397 (+)
afdna afdn,LOC102779179 other downstream 1132041 28539400 ~ 28649123 (+)
ttll2 ttll2 other downstream 1465327 28872686 ~ 28883121 (+)
G188063 NA other downstream 1479131 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 1703599 29110958 ~ 29132700 (+)
G188167 ucn other downstream 1726812 29134171 ~ 29136917 (+)

Expression


Co-expression Network