LOC120547034 (LOC104954367)


Basic Information

Item Value
gene id LOC120547034
gene name LOC104954367
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 3875160 ~ 3884613 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782384.1
GTCTTCAACAAACCAAAAGCCTCTCTTTGGTAATGGTCAATGTCGCAGTGCCCCGGGCTTCCAGCCCCACCCCTGTCCAGTCGTGAGCAGAGCTCTGAGTTTCCCAAGCCCCCCAGTGCCCTGGCTCGGGACACCCTCCCAGTGCTGCACTCCCCCAGGCCTGACAGCCTGCCGCCTGCTCTTCTTGGCAGCAAACAGCCAAGGGAGGATCAGGACGAGCGGGCGGCTGAGATAAGGACCACATGAAGTTCCCCACATTACCTCACCCGATAAGGAAACGAGccgagacagacggagagagagagggtcagACTGGGAGGAACTCTCTGGGTGGACTCTGATGCGCAGAGAGGCAGCCAGGGATTGTGGGTTTTTTAGGGGTCTGAGTGGAACTGGGCacctacagagagagaggtggagatCCTTGAACAGGACGTCCTCAGTAGCTACAGAATGATGAATGATTTCAGCTGTTGTTGAGCCAGTTTTTACACCAGATGTTTAAAATGCTCCGATGGAGAGATGAGCTCAGACTGTGTGTTTACCAAAGCACTTAGTGGATGATACTTCCACAACAAACACAGGAAAGCAAACCACCTTCCAGCCAATGAAAATAGACTGAGCCAAAGTGAATTCAGTGTTCAGGGGAGTCTGCTCCAGCGCTTCGGCAGCAGCCATGGCCGTGAATCCTCTGGAAGGTCTCATGTCGGTCGCGGCGAGGCACCAGCTGGTCTCCAGCCCCACCGCTGAGCCACAGAGGCAGCAGAGCCCAGCATCCCCGCACGCACTCAGGCACAGCACACGCAGCAGCCGGGAGCCCAGGAAGTGGGtgcagtctgtgtgtgggtcCAGGTCAAACTCTGGTTCTGGTTGGGAGTCTGCGGTCCAGTCCAGGACACTGAGGAGTCAGCACTCCCCAGAAAACGCAGCGCGAGAGCGGAGCCGCGTTCGCAACCTCCGCCAGGCCTTCCACAGCCTGCAGGCTGCTCTGCCCTCCGTCCCCCCAGACACCAAACTGTCCAAGCTGGATGTCCTGCTTCTGGCTACCAACTACATAGCTTACCTAACAGAGACACTGGACCAGGGGGGGGTGTTGGCTGAGCACACGCTGCCCTCCCGGCCGGGTGGATACCTGCATCCTGTTAAGAAGTGGCCCATGCGTTCCCTGCTCTACTGTGGCAGCGTGGGAGAGCTGCTGTCAGGAGtcccagccaatcagatgcctCCACCTGGACAGGACGGGGCACAGCCACTGACCCCTGCTGCAGAAGCAGAGCGGGAGTGATAGCAGAGCCCGGAACAGGACTCTCCCAGGGTTAGCTCCAGTGATCAGTAACCGTCAGAAGCTACATGCCTGCTCACTCCCCCCCTCCCGAAGTCAAAGCAAGGCAAACATTTGAATATTCTGgagggagataaaaaaaaaaaaaagcagcagtggttggttggttggtctaatattataatataataatatataataataatgaaggaCAGTGAGCATGTTTATCTCTGCCTAAATTTCACATCTtgattaaacacaaaactgt

Function

NR:

description
PREDICTED: transcription factor 24-like

GO:

id name namespace
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782384.1 True 1550 mRNA 0.55 4 3875160 3884613

Neighbor

gene id symbol gene type direction distance location
ankrd6b ankrd6 coding downstream 52247 3773170 ~ 3822913 (-)
casp8ap2 NA coding downstream 196563 3661553 ~ 3678597 (-)
gja10b gja10 coding downstream 230590 3640175 ~ 3644570 (-)
ufl1 ufl1,LOC104942535 coding downstream 1261625 2590462 ~ 2613535 (-)
col10a1b col10a1,LOC104966941,LOC107384801 coding downstream 1468005 2400734 ~ 2407155 (-)
ephx1 ephx1,LOC102787086 coding upstream 352 3884965 ~ 3890650 (-)
LOC120547172 NA coding upstream 292960 4177573 ~ 4184958 (-)
trnad-guc_28 NA coding upstream 294256 4178869 ~ 4178940 (-)
LOC120547177 NA coding upstream 310530 4195143 ~ 4196360 (-)
LOC120547149 LOC103361227,LOC102782649 coding upstream 475589 4360202 ~ 4400599 (-)
G182028 NA non-coding downstream 5461 3867864 ~ 3869699 (-)
G182027 NA non-coding downstream 8800 3866017 ~ 3866360 (-)
G182018 NA non-coding downstream 43763 3830750 ~ 3831397 (-)
G182004 mdn1 non-coding downstream 119892 3752653 ~ 3755268 (-)
G181932 NA non-coding downstream 215610 3658371 ~ 3659550 (-)
G182099 NA non-coding upstream 207810 4092423 ~ 4092630 (-)
G182105 NA non-coding upstream 218162 4102775 ~ 4103572 (-)
LOC120547275 NA non-coding upstream 273078 4157691 ~ 4162110 (-)
trnav-aac_22 NA non-coding upstream 273423 4158036 ~ 4158108 (-)
trnav-aac_23 NA non-coding upstream 275709 4160322 ~ 4160394 (-)
G181919 bach2 other downstream 264831 3608847 ~ 3610329 (-)
G181860 NA other downstream 499052 3375765 ~ 3376108 (-)
G181297 NA other downstream 3235647 638810 ~ 639513 (-)
G181206 NA other downstream 3795850 57976 ~ 79310 (-)
G181196 NA other downstream 3826407 47081 ~ 48753 (-)
srp9 srp9 other upstream 7024 3891637 ~ 3893175 (-)
G182061 NA other upstream 22004 3906617 ~ 3912279 (-)
G182059 NA other upstream 23934 3908547 ~ 3914015 (-)
G182102 NA other upstream 215397 4100010 ~ 4100480 (-)
trnav-aac_20 NA other upstream 264294 4148907 ~ 4148978 (-)

Expression


Co-expression Network