fam228a


Basic Information

Item Value
gene id fam228a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 16876319 ~ 16880335 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782388.1
GGGAATGCCACTTTAAACCCAGGACGTTTTGGTGAGCTGAAGTCGTCTCGCGCTGAACGCCGCGTTCGACTTTGCTCTCTTGTGAGCCGGTGTCCTGGCAACGGAAAACCTTCAGACGGCAGAACCACCTGCGCGTGATGAGCTGACCCAAAACCAAAGGAGGTTTACTTCATTTTGGCTGTTTTTCTTCGGACTTATAACCCAAACGTCCTCAAGTAAACGAAGGGATGAGCCCCAAGAAGAACAACAGTGCCAGTGGTGTGATCACCTTCCACACACCATTTCATGTCAGCCTGTTAAAAtcagagGAGTGCATGGCTGTTGGGAAGGACGCTACAGACCGCAGAAAGAGCCCGTCTCACCCGAGCGAGAGGACGAGGAGCATCAGTAAATGTGTAAGAGCAGAGAAAAAGGATGAGTCCTCACCCTCTGGGCCACAGTCGGGAGCCACACAGTACTGGCTCTCTCACACCTCCATCAGGCGACTGCAGGCAAAGATGGAGGATGATAATCAACAGGTGAAAGCAACAATTCAAGCAATACTGGATACAGAAAATGGCTTTATGAAGGAGTTGGAAAGGTTTCTGGGTCAACGGGACGTAACagagctgaggaggagggagctGCTGCACAAGCGCTGGACTGAGCGTGTGTGGTTTCCCCTCCAGAGGAGAGTGAAGAAACATGTGTCCAGCTGCAGCCCTGTGGCGGTCAAGAGGCGCCTGAGTTTATACAGTCACTACCTCCATCAATGCAACAGCAAGGGCGTCGTGCTTCTAGAAAGCTATGATCTAAGGGAATACAATCCGTTTCTTCTCCACATTAAAAAGCCACACTATGTGAAGCTCAGTACAGCTGACTTAAAGGACCCATTGTACCTTCAGTTACATGAAAGACTGAAGGAGAAGAGAACAGCCCGCTCTTGTGAAGAAGGATGTAAAAGACAAGAAGAGAAGCTGCCTCAGAGTGATCGTCCTCTAAGTGAGTCTGTGACGTCTCAGGCCGACATGCTGCTACACGCCTCATCTAATCATCCGGTCACTGCATCCAGAAAAACTCCAGTGGTGGATGAGACTGAAGGAAGGAAGTCCAGCAGAATCAACACCATACCATGCCGCCGCCTCTTTGCAACTGCCACACCAGATGGAAGGTGCCATCAGACCAGCTGCTGGTTCTCCAGATGTCGGCAACAAGCAGCAAGTGTACAACAACTTCAGTCCTCGCCTACATCCAAATAAAATCCACATTAACCGTAAATCGTCACTTCTATTCCCTTCTAACTACCTTACAGTTTTCCCAGGGacacaacaaagaaaaaacttttactatatgtacattttattcatgccattttcaggattttttggCACACTTAGGGTTAACCTTTGACATTACATTGTACAGTAGTGTGCAACATTGGCCGTGTGCCGGCGTATGTATAACAGGGTGTATGGCTTCATATTAACAAATTCAGACATGTTGTAAGAGACAAGAGTAAAATAGTGTAAATATGAGTATTCCAAAAATCTAACTGTGCCCATTATGTTCACATTTTAGCTGGGTTGTTGGCAACAAGAACACCTTTATCCACAATA
>XM_039782390.1
TTAGGGAATGCCACTTTAAACCCAGGACGTTTTGGTGAGCTGAAGTCGTCTCGCGCTGAACGCCGCGTTCGACTTTGCTCTCTTGTGAGCCGGTGTCCTGGCAACGGAAAACCTTCAGACGGCAGAACCACCTGCGCGTGATGAGCTGACCCAAAACCAAAGGAGGTTTACTTCATTTTGGCTGTTTTTCTTCGGACTTATAACCCAAACGTCCTCAAGTAAACGAAGGGATGAGCCCCAAGAAGAACAACAGTGCCAGTGGTGTGATCACCTTCCACACACCATTTCATGTCAGCCTGTTAAAAtcagagGAGTGCATGGCTGTTGGGAAGGACGCTACAGACCGCAGAAAGAGCCCGTCTCACCCGAGCGAGAGGACGAGGAGCATCAGTAAATGTGTAAGAGCAGAGAAAAAGGATGAGTCCTCACCCTCTGGGCCACAGTCGGGAGCCACACAGTACTGGCTCTCTCACACCTCCATCAGGCGACTGCAGGCAAAGATGGAGGATGATAATCAACAGGTGAAAGCAACAATTCAAGCAATACTGGATACAGAAAATGGCTTTATGAAGTTGGAAAGGTTTCTGGGTCAACGGGACGTAACagagctgaggaggagggagctGCTGCACAAGCGCTGGACTGAGCGTGTGTGGTTTCCCCTCCAGAGGAGAGTGAAGAAACATGTGTCCAGCTGCAGCCCTGTGGCGGTCAAGAGGCGCCTGAGTTTATACAGTCACTACCTCCATCAATGCAACAGCAAGGGCGTCGTGCTTCTAGAAAGCTATGATCTAAGGGAATACAATCCGTTTCTTCTCCACATTAAAAAGCCACACTATGTGAAGCTCAGTACAGCTGACTTAAAGGACCCATTGTACCTTCAGTTACATGAAAGACTGAAGGAGAAGAGAACAGCCCGCTCTTGTGAAGAAGGATGTAAAAGACAAGAAGAGAAGCTGCCTCAGAGTGATCGTCCTCTAAGTGAGTCTGTGACGTCTCAGGCCGACATGCTGCTACACGCCTCATCTAATCATCCGGTCACTGCATCCAGAAAAACTCCAGTGGTGGATGAGACTGAAGGAAGGAAGTCCAGCAGAATCAACACCATACCATGCCGCCGCCTCTTTGCAACTGCCACACCAGATGGAAGGTGCCATCAGACCAGCTGCTGGTTCTCCAGATGTCGGCAACAAGCAGCAAGTGTACAACAACTTCAGTCCTCGCCTACATCCAAATAAAATCCACATTAACCGTAAATCGTCACTTCTATTCCCTTCTAACTACCTTACAGTTTTCCCAGGGacacaacaaagaaaaaacttttactatatgtacattttattcatgccattttcaggattttttggCACACTTAGGGTTAACCTTTGACATTACATTGTACAGTAGTGTGCAACATTGGCCGTGTGCCGGCGTATGTATAACAGGGTGTATGGCTTCATATTAACAAATTCAGACATGTTGTAAGAGACAAGAGTAAAATAGTGTAAATATGAGTATTCCAAAAATCTAACTGTGCCCATTATGTTCACATTTTAGCTGGGTTGTTGGCAACAAGAACACCTTTATCCACAATA
>XM_039782391.1
AGGGAATGCCACTTTAAACCCAGGACGTTTTGGTGAGCTGAAGTCGTCTCGCGCTGAACGCCGCGTTCGACTTTGCTCTCTTGTGAGCCGGTGTCCTGGCAACGGAAAACCTTCAGACGGCAGAACCACCTGCGCGTGATGAGCTGACCCAAAACCAAAGGAGGTTTACTTCATTTTGGCTGTTTTTCTTCGGACTTATAACCCAAACGTCCTCAAGTAAACGAAGGGATGAGCCCCAAGAAGAACAACAGTGCCAGTGGTGTGATCACCTTCCACACACCATTTCATGTCAGCCTGTTAAAAtcagagGAGTGCATGGCTGTTGGGAAGGACGCTACAGACCGCAGAAAGAGCCCGTCTCACCCGAGCGAGAGGACGAGGAGCATCAGTAAATGTGTAAGAGCAGAGAAAAAGGATGAGTCCTCACCCTCTGGGCCACAGTCGGGAGCCACACAGTACTGGCTCTCTCACACCTCCATCAGGCGACTGCAGGCAAAGATGGAGGATGATAATCAACAGGTGAAAGCAACAATTCAAGCAATACTGGATACAGAAAATGGCTTTATGAAGGAGTTGGAAAGGTTTCTGGGTCAACGGGACGTAACagagctgaggaggagggagctGCTGCACAAGCGCTGGACTGAGCGTGTGTGGTTTCCCCTCCAGAGGAGAGTGAAGAAACATGTGTCCAGCTGCAGCCCTGTGGCGGTCAAGAGGCGCCTGAGTTTATACAGTCACTACCTCCATCAATGCAACAGCAAGCTCAGTACAGCTGACTTAAAGGACCCATTGTACCTTCAGTTACATGAAAGACTGAAGGAGAAGAGAACAGCCCGCTCTTGTGAAGAAGGATGTAAAAGACAAGAAGAGAAGCTGCCTCAGAGTGATCGTCCTCTAAGTGAGTCTGTGACGTCTCAGGCCGACATGCTGCTACACGCCTCATCTAATCATCCGGTCACTGCATCCAGAAAAACTCCAGTGGTGGATGAGACTGAAGGAAGGAAGTCCAGCAGAATCAACACCATACCATGCCGCCGCCTCTTTGCAACTGCCACACCAGATGGAAGGTGCCATCAGACCAGCTGCTGGTTCTCCAGATGTCGGCAACAAGCAGCAAGTGTACAACAACTTCAGTCCTCGCCTACATCCAAATAAAATCCACATTAACCGTAAATCGTCACTTCTATTCCCTTCTAACTACCTTACAGTTTTCCCAGGGacacaacaaagaaaaaacttttactatatgtacattttattcatgccattttcaggattttttggCACACTTAGGGTTAACCTTTGACATTACATTGTACAGTAGTGTGCAACATTGGCCGTGTGCCGGCGTATGTATAACAGGGTGTATGGCTTCATATTAACAAATTCAGACATGTTGTAAGAGACAAGAGTAAAATAGTGTAAATATGAGTATTCCAAAAATCTAACTGTGCCCATTATGTTCACATTTTAGCTGGGTTGTTGGCAACAAGAACACCTTTATCCACAATA
>XM_039782392.1
TAGGGAATGCCACTTTAAACCCAGGACGTTTTGGTGAGCTGAAGTCGTCTCGCGCTGAACGCCGCGTTCGACTTTGCTCTCTTGTGAGCCGGTGTCCTGGCAACGGAAAACCTTCAGACGGCAGAACCACCTGCGCGTGATGAGCTGACCCAAAACCAAAGGAGGTTTACTTCATTTTGGCTGTTTTTCTTCGGACTTATAACCCAAACGTCCTCAAGTAAACGAAGGAGTGCATGGCTGTTGGGAAGGACGCTACAGACCGCAGAAAGAGCCCGTCTCACCCGAGCGAGAGGACGAGGAGCATCAGTAAATGTGTAAGAGCAGAGAAAAAGGATGAGTCCTCACCCTCTGGGCCACAGTCGGGAGCCACACAGTACTGGCTCTCTCACACCTCCATCAGGCGACTGCAGGCAAAGATGGAGGATGATAATCAACAGGTGAAAGCAACAATTCAAGCAATACTGGATACAGAAAATGGCTTTATGAAGGAGTTGGAAAGGTTTCTGGGTCAACGGGACGTAACagagctgaggaggagggagctGCTGCACAAGCGCTGGACTGAGCGTGTGTGGTTTCCCCTCCAGAGGAGAGTGAAGAAACATGTGTCCAGCTGCAGCCCTGTGGCGGTCAAGAGGCGCCTGAGTTTATACAGTCACTACCTCCATCAATGCAACAGCAAGGGCGTCGTGCTTCTAGAAAGCTATGATCTAAGGGAATACAATCCGTTTCTTCTCCACATTAAAAAGCCACACTATGTGAAGCTCAGTACAGCTGACTTAAAGGACCCATTGTACCTTCAGTTACATGAAAGACTGAAGGAGAAGAGAACAGCCCGCTCTTGTGAAGAAGGATGTAAAAGACAAGAAGAGAAGCTGCCTCAGAGTGATCGTCCTCTAAGTGAGTCTGTGACGTCTCAGGCCGACATGCTGCTACACGCCTCATCTAATCATCCGGTCACTGCATCCAGAAAAACTCCAGTGGTGGATGAGACTGAAGGAAGGAAGTCCAGCAGAATCAACACCATACCATGCCGCCGCCTCTTTGCAACTGCCACACCAGATGGAAGGTGCCATCAGACCAGCTGCTGGTTCTCCAGATGTCGGCAACAAGCAGCAAGTGTACAACAACTTCAGTCCTCGCCTACATCCAAATAAAATCCACATTAACCGTAAATCGTCACTTCTATTCCCTTCTAACTACCTTACAGTTTTCCCAGGGacacaacaaagaaaaaacttttactatatgtacattttattcatgccattttcaggattttttggCACACTTAGGGTTAACCTTTGACATTACATTGTACAGTAGTGTGCAACATTGGCCGTGTGCCGGCGTATGTATAACAGGGTGTATGGCTTCATATTAACAAATTCAGACATGTTGTAAGAGACAAGAGTAAAATAGTGTAAATATGAGTATTCCAAAAATCTAACTGTGCCCATTATGTTCACATTTTAGCTGGGTTGTTGGCAACAAGAACACCTTTATCCACAATA

Function

NR:

description
protein FAM228B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782388.1 False 1595 mRNA 0.47 9 16876322 16880335
XM_039782390.1 True 1595 mRNA 0.47 9 16876319 16880335
XM_039782391.1 False 1515 mRNA 0.48 8 16876321 16880335
XM_039782392.1 False 1514 mRNA 0.47 8 16876320 16880335

Neighbor

gene id symbol gene type direction distance location
gnpat2 gnpat coding upstream 3211 16858208 ~ 16873108 (+)
lpin1b lpin1,LOC104949544 coding upstream 19706 16837534 ~ 16856613 (+)
wdr26b wdr26,LOC104925620,LOC103363787 coding upstream 112875 16746173 ~ 16763444 (+)
LOC120546775 adcy3,LOC102197140,LOC101471325 coding upstream 131489 16730063 ~ 16744830 (+)
rsph9 rsph9 coding upstream 266593 16605386 ~ 16609726 (+)
nbas nbas coding downstream 85131 16965466 ~ 17134416 (+)
ppp1r14c ppp1r14c coding downstream 432139 17312474 ~ 17331367 (+)
mtfr2 NA coding downstream 497847 17378182 ~ 17391719 (+)
LOC120546616 pde7b,LOC102780239 coding downstream 527439 17407774 ~ 17430002 (+)
hbs1l hbs1l coding downstream 599863 17480198 ~ 17504874 (+)
G184851 naga,LOC104944830 non-coding upstream 149927 16724877 ~ 16726392 (+)
G184796 NA non-coding upstream 265939 16595940 ~ 16610380 (+)
LOC120546561 NA non-coding upstream 359986 16493194 ~ 16516333 (+)
G184633 LOC101069623,LOC100711363,LOC102312356,LOC101478077,LOC102202636 non-coding upstream 462818 16411676 ~ 16413501 (+)
G184618 NA non-coding upstream 519771 16291211 ~ 16356548 (+)
G184948 NA non-coding downstream 53361 16933696 ~ 16956864 (+)
G184995 NA non-coding downstream 400780 17281115 ~ 17299420 (+)
G185022 NA non-coding downstream 513199 17393534 ~ 17397048 (+)
LOC120546618 NA non-coding downstream 549685 17430020 ~ 17447803 (+)
G185015 NA non-coding downstream 558354 17438689 ~ 17440600 (+)
G184859 NA other upstream 43005 16825694 ~ 16833314 (+)
si:ch211-57i17.1 LOC103363786 other upstream 96384 16765545 ~ 16779935 (+)
vegfab vegfa other upstream 190240 16671586 ~ 16686079 (+)
G184628 LOC104949332,LOC106633454,LOC101477798,LOC102792991 other upstream 472242 16399438 ~ 16404077 (+)
cenpw NA other upstream 494463 16379479 ~ 16381856 (+)
G184996 sec63 other downstream 413319 17293654 ~ 17295701 (+)
map7b map7,LOC107374525 other downstream 461502 17341837 ~ 17375059 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other downstream 788837 17669172 ~ 17686398 (+)
LOC120546940 NA other downstream 794058 17674393 ~ 17693634 (+)
G185237 NA other downstream 1036518 17916853 ~ 17917248 (+)

Expression


Co-expression Network