LOC120547068


Basic Information

Item Value
gene id LOC120547068
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 9944865 ~ 9945741 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782467.1
AGATCAGAAGATATAAAGAAGATGTGAATTTCACTTCCTTCACTTCTGCAAACAGACTGACTGGTGTGAAATTCAAGACTgATCATGAAAAAGAACTTCTTGTCTAAAAATGAGCAGCTCTTCAAGGACGAGTTGCTGGTTTCCAACAATGGGAAGTGGCAGGCTATCTTCCAGGGTGATGGTAACTTCGTCGTCTATGGTGACAGCAAGCCTGTGTGGGCTTCAGGCACCAATGGATCAGACCGTTACCGTGTGATCATGCAGGCTGACGGCAACCTGGTCATGTACAACAATAATAACCAAGCCGTGTGGAGCACAAATACATACCTCAAGGAGGAGTGTGAGATGTGCCGTCTTGTACTGACTGACAGCGGCAAACTGGAGTTGATCCAAACTGTACCTAAAAAGGTTTGGAGCTCATGATGAAATTAGGCCCAATGTCTTAACATGACATCACaaagtttttaaaatgaaatgcttTGCAAGTGAAAATCATCTTTGTTTGTGCATTACAATAAACATGCCTGGTATGTAATCGGGAACCAAA

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782467.1 True 547 mRNA 0.43 3 9944865 9945741

Neighbor

gene id symbol gene type direction distance location
LOC120546991 NA coding downstream 89481 9853740 ~ 9855384 (-)
stmn4 stmn4 coding downstream 322154 9603488 ~ 9622711 (-)
paqr8 paqr8 coding downstream 387936 9550004 ~ 9556929 (-)
znf395b znf395 coding downstream 417437 9505432 ~ 9527428 (-)
si:ch211-63o20.7 LOC103362993,LOC101481409 coding downstream 474348 9460778 ~ 9470517 (-)
LOC120547244 NA coding upstream 190259 10136000 ~ 10137776 (-)
cnstb LOC103373900 coding upstream 202334 10148075 ~ 10173978 (-)
kif26bb NA coding upstream 232568 10178309 ~ 10208325 (-)
lft1 LOC104927083,LOC104968260,LOC100695903,LOC101475792,LOC102299013 coding upstream 281075 10226816 ~ 10229005 (-)
fzd3a fzd3 coding upstream 401259 10347000 ~ 10379127 (-)
G183317 snap25,snap25a,LOC107719097,LOC102796069,LOC107698362,LOC107599071 non-coding downstream 98007 9829876 ~ 9846858 (-)
G183299 LOC103398511 non-coding downstream 226660 9716590 ~ 9718205 (-)
G183298 emilin1,LOC103398511,LOC103372345 non-coding downstream 229526 9709053 ~ 9715339 (-)
G183296 NA non-coding downstream 257746 9686722 ~ 9687119 (-)
G183263 NA non-coding downstream 401639 9532546 ~ 9543226 (-)
G183382 NA non-coding upstream 99440 10045181 ~ 10045495 (-)
G183383 NA non-coding upstream 102216 10047957 ~ 10048232 (-)
LOC120547073 NA non-coding upstream 118852 10064593 ~ 10066286 (-)
G183458 NA non-coding upstream 228995 10174736 ~ 10175355 (-)
G183457 NA non-coding upstream 231159 10176900 ~ 10177569 (-)
G183176 NA other downstream 811393 9129573 ~ 9133472 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other downstream 920300 9020960 ~ 9024565 (-)
LOC120546397 NA other downstream 1157647 8781328 ~ 8787218 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 1818201 8049458 ~ 8126664 (-)
G182977 NA other downstream 1919821 8024715 ~ 8025044 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 153737 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 509503 10455244 ~ 10610625 (-)
G183528 NA other upstream 574976 10520717 ~ 10521410 (-)
G183650 NA other upstream 1428367 11374108 ~ 11374615 (-)
ost4 NA other upstream 2961561 12907302 ~ 12908747 (-)

Expression


Co-expression Network