LOC120547119


Basic Information

Item Value
gene id LOC120547119
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 28866213 ~ 28872603 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782552.1
atcACAGCTGTTGATCTCTGTAGGAAAGCCAGCAGAGGCCTTTGGGTTCACAGCAGCTCTCTTTGTTGAGATTGCGTTGCATTATGTGGCTTCTGATTGTCGTCTGTGTGATGACAGTTGTTGGCGGTGTTCCCATAAATCCAACCCAGGAGGCCACCAGTCATGCTCCAGTTGGTTTCGTCCCCTCAAATAACACCCAGAATGTGACTACCGGTAGTCCTGCAACAGGTGTGGTTGCTGTAATGCTGGGGCCACAGCAATACGCTGCAGAAACCTTAGAAGAGCTTGAAGGAGACGCAATTATCCATGAGGGAGACATTGTGATGTCGGGCGACAGGAATGCTGTGGAGAGCATCTGGTCGGACGCCATCGTACCTTACACCATCAGCGACGAGCTGGCTCCTCAAGAGTTGAAAATCCTCAATGCCTTCAAGATGATATCGGATGTCACCTGCATTCGCTTCATACAACGCACCACAGAGTCAAACTCCCTCCTGTTCACAAGTGGCAGAGGCTGTGCGTCCTATGTTGGTTGTCAGGGAGGTGTCCAGCTGCTGTATTACAGCAAGTCATGTAGCCGGGGCAATCTCTGCCATGAGATCGTTCATGCTCTGGGGCTGCATCATGAACACACCCGCGAGGACCGGGATCTCTACATCAGTGTGCAGCGGCAGAACATCATACCAGggaGAGAAGGGAACTTCATGGTGAAACATGGAAACACTATGAACCTGCCTTATGACCTGGAATCCATAATGCACTATGGAGAGTATTTTTTCAGTGTAAATGGGAGTCCGACGGTGTTGTCAAAGCAGAATGAAGTGCTCATGGGTCAGAGAACGCATCTCTCCAACCTGGATATACTGAAACTCAACAAACTCTACCACTGTGaagaggggAAACCATGAGTAGGCTGGCTGACCTGCATTTGCtatgatttaataaaatataaaaatcctG
>XM_039782553.1
atcACAGCTGTTGATCTCTGTAGGAAAGCCAGCAGAGGCCTTTGGGTTCACAGCAGCTCTCTTTGTTGAGATTGCGTTGCATTATGTGGCTTCTGATTGTCGTCTGTGTGATGACAGTTGTTGGCGGTGTTCCCATAAATCCAACCCAGGAGGCCACCAGTCATGCTCCAGTTGGTTTCGTCCCCTCAAATAACACCCAGAATGTGACTACCGGTAGTCCTGCAACAGGTGTGGTTGCTGTAATGCTGGGGCCACAGCAATACGCTGCAGAAACCTTAGAAGAGCTTGAAGGAGACGCAATTATCCATGAGGGAGACATTGTGATGTCGGGCGACAGGAATGCTGTGGAGAGCATCTGGTCGGACGCCATCGTACCTTACACCATCAGCGACGAGCTGGCTCCTCAAGAGTTGAAAATCCTCAATGCCTTCAAGATGATATCGGATGTCACCTGCATTCGCTTCATACAACGCACCACAGAGTCAAACTCCCTCCTGTTCACAAGTGGCAGAGGCTGTGCGTCCTATGTTGGTTGTCAGGGAGGTGTCCAGCTGCTGTATTACAGCAAGTCATGTAGCCGGGGCAATCTCTGCCATGAGATCGTTCATGCTCTGGGGCTGCATCATGAACACACCCGCGAGGACCGGGATCTCTACATCAGTGTGCAGCGGCAGAACATCATACCAGggaGAGAAGGGAACTTCATGGTGAAACATGGAAACACTATGAACCTGCCTTATGACCTGGAATCCATAATGCACTATGGAGAGTATTTTTTCAGTGTAAATGGGAGTCCGACGGTGTTGTCAAAGCAGAATGAAGTGCTCATGGGTCAGAGAACGCATCTCTCCAACCTGGATATACTGAAACTCAACAAACTCTACCACTGTGaggggAAACCATGAGTAGGCTGGCTGACCTGCATTTGCtatgatttaataaaatataaaaatcctG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782552.1 True 960 mRNA 0.49 11 28866213 28872603
XM_039782553.1 False 957 mRNA 0.49 11 28866213 28872603

Neighbor

gene id symbol gene type direction distance location
plg plg coding upstream 79395 28773325 ~ 28786818 (+)
vgll2a vgll2,LOC102778318 coding upstream 118021 28741168 ~ 28748192 (+)
rfx6 rfx6,LOC102778618,LOC102305591,LOC102193265 coding upstream 176622 28669262 ~ 28689591 (+)
ncoa1 ncoa1 coding upstream 399340 28393107 ~ 28466873 (+)
ptrhd1 ptrhd1,LOC102782396,LOC103399259 coding upstream 483129 28381682 ~ 28383084 (+)
gpr31 NA coding downstream 29773 28902376 ~ 28906380 (+)
LOC120547117 gpr31,LOC104934219,LOC104957175 coding downstream 44688 28917291 ~ 28924763 (+)
slc30a2 slc30a3,LOC102796772 coding downstream 323566 29196169 ~ 29220727 (+)
LOC120546480 NA coding downstream 443156 29315759 ~ 29371150 (+)
LOC120546866 LOC103363081,LOC108247050,LOC101159876,LOC107104461 coding downstream 988771 29861374 ~ 29875824 (+)
trnal-cag_2 NA non-coding upstream 213529 28652602 ~ 28652684 (+)
G187918 NA non-coding upstream 320698 28472115 ~ 28545515 (+)
LOC120546306 NA non-coding upstream 361822 28500729 ~ 28504391 (+)
G187915 NA non-coding upstream 445951 28419992 ~ 28420262 (+)
G187906 NA non-coding upstream 488573 28365238 ~ 28377640 (+)
G188057 NA non-coding downstream 6145 28878748 ~ 28880435 (+)
G188069 NA non-coding downstream 41799 28914402 ~ 28914798 (+)
G188091 NA non-coding downstream 58455 28931058 ~ 28944726 (+)
G188097 NA non-coding downstream 100996 28973599 ~ 28973911 (+)
G188100 NA non-coding downstream 104367 28976970 ~ 28977625 (+)
afdna afdn,LOC102779179 other upstream 217090 28539400 ~ 28649123 (+)
LOC120546215 LOC104930085 other upstream 1827985 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 2128410 26695430 ~ 26737803 (+)
G187574 NA other upstream 2180706 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 2413848 26438486 ~ 26452365 (+)
ttll2 ttll2 other downstream 83 28872686 ~ 28883121 (+)
G188063 NA other downstream 13887 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 238355 29110958 ~ 29132700 (+)
G188167 ucn other downstream 261568 29134171 ~ 29136917 (+)
si:ch211-245h14.1 NA other downstream 420102 29292705 ~ 29312364 (+)

Expression


Co-expression Network