paplnb


Basic Information

Item Value
gene id paplnb
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 21938478 ~ 21944082 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782589.1
TTGATTTTGACATATTTAACTAAAACTCATGGCTGCAGACTTGATATAAAACTATAAGCAGTCTCACAGCCTGAGGGTTTTAAGTGGAAACTATGTGCTTCAAATAGATGAAATCATAGCTTATATTCCacgttaaaaaaagaagtcccATTTTCTTGGTGGGGGGAAACAGTTTCTCTGTGTGGGTGAAACCTGACACTTTATGGGATGTGGTGTTGGTGAGCAGCGAGGGTGAGAAGACAGAAAGCTGGGCGTCAGTGCCTATACCTTCACTAGTGAGGTGCACAGCCCTCTGGACTGCTGGTCGACCAGCTGGGAATTCACTTCAAGAAGCCATCCTCATCAGTAGTTCTGCTGTAGCTTCTGGTGAAAATGAAGACCCTACAAGTCCTGGTTCTCCTACAGCTGCTGGTTGTACCTGCTATCACTctgACACAGCCAACCCATGACTACTGGGGAGAGTTTGGAGCCTATGGGCCCTGCAGCCGCACCTGTGGCACAGGAGTGGCAATGCGAACTAGGAAATGTATCACTTCAAGGACAGATGGGGGACATAACTGCATAGGCTCCTCTAAGTCCTACCGAACCTGCAACACACATGAATGTCCAGTTGGATCAAGGGACTTCAGGGAGGAGCAGTGCTCCCAGTTCGACAGAATAGACTTTCAGAGCAAGCGGCAGACATGGGTGCCTTATTATGGAGCATCCAATCCATGTGAGCTGACCTGTGTCCCAAGAGGAGAGAACTTCTTCTACCGACACAGACCTGCAGTGGTGGATGGCACACCATGCTACGTGGGCCGCACTGATATCTGTGTGGACGGCATCTGCAGGATACTGATCCAGGGAGAGTTTATGGGCTTGGATGAGGACACTAATTCCGTACACTCTGCTGCCCCCATTGCTGTTGCTCCTCACCCAAGGGAGACACTCACATATATCTACAAAACTGGTGTCTATGGACAATGCTCTGCCTCATGCAATGGAGGCATGCAGTATCGCAACGTGGAGTGTTGGGTTCAGGACCCAGTGAACCCCCGTGTGGTGGAAGAGTCTTACTGCATCACCCAGCGCCTGCAGAGGCCACACAGCCAGCAGGCCTGCAACATGCATCCGTGTGCTGCGGAGTACAGTGTCTCCAGCTTCAGTGTGTGCTCGGTGACTTGTGGGGAGGGCCAGCAGACAAGGGAGGTGACCTGTGTTGGGTCGGGTGGTGAACGTCTGGCTGACCATGCCTGTAGTGGATTGGCAAAACCCCCTTCTGTCCAGTCCTGCCGCAGACCtgcctgtcacacacacatcacctgGCATGTGACTGACTACGGACTGTGCACCAGAAGCTGCGGTGGTGGTgtgagggagaggagagtgggCTGTTTTGATACAGATTTAAACCCTTACTCAGAGGCCCGCTGTGGAACAGCTAGCAGACCTCTCTCTGTGGAGACATGCAACTCACAGCCATGTCCCAGAGCACAGATGGTCCCAAGTGTACAGGACCCAAGGGCACATGAAAGCACCATAAGAGGATTTGTGCCCCATGTTCCAGGAGACCCTTCAGCTTCCATGCCACAGACAAACATTGCTACCTACCCTCCTGTGATTGGTCCTCACTGTGCACAGTCATTCTATGGCTGCTGTCCTGACGGCCAAACCTCTGCCACAGGGCCCAGGAATGAGGGCTGCTCCCAAGATGACTGTGTTCGCACTAGGTATGGCTGTTGTTTGGATGGTGTGACTCCAGCTCAAGGATTTGGAAGGGCTGGATGTCCCGAGTACCTGACAGCTGTGCAACAACCACCACCTCCTGCCCATCCATCCACTGGTAATATGTGCTCCATGCCTCGTGATGAGGGCCCCTGTGATACTTGGATGGTTCGCTTCTACTATGACTCAGGCACTGGCAAATGTACTGAGTTCTGGTATGGAAGCTGCCAGGGAAATGCTAATAACTTTGGGTCCCTGGAAGCATGCCAGAGAGAGTGTGGGGGTGTGGCAACCCCAAGAGGGACCCCAAGGAGAGGGTCAACCAGTGGTGCTTTGAGGGCAAGGTCATAACCATGCTCACCACTAATGCCTCCAAATCAGGGCCATCTCTATGAAGCTATTACGTGATATTTGTACACACGTAGTATTTACATAtatgaagacacacacaaacatgtattaAAACTAACCACATCCTGCCTTTCATTTAAACATCAgactttacataaaaaaattatctaGATAGTCTAACATTATATGTGACATAATTGCAGCTGATGGTTCTGATTTTCTTATCTTTTTGTGATGCTCAGTATATATTCacttatatatttttacttttagatCTGGACTACAATAAAATAATGTCAATGTGATTACCCAAGTTAAATCATCGACCTAATCAATAAAAATTGTGTGGTTTA
>XM_039782590.1
TTGATTTTGACATATTTAACTAAAACTCATGGCTGCAGACTTGATATAAAACTATAAGCAGTCTCACAGCCTGAGGGTTTTAAGTGGAAACTATGTGCTTCAAATAGATGAAATCATAGCTTATATTCCacgttaaaaaaagaagtcccATTTTCTTGGTGGGGGGAAACAGTTTCTCTGTGTGGGTGAAACCTGACACTTTATGGGATGTGGTGTTGGTGAGCAGCGAGGGTGAGAAGACAGAAAGCTGGGCGTCAGTGCCTATACCTTCACTAGTGAGGTGCACAGCCCTCTGGACTGCTGGTCGACCAGCTGGGAATTCACTTCAAGAAGCTTCTGGTGAAAATGAAGACCCTACAAGTCCTGGTTCTCCTACAGCTGCTGGTTGTACCTGCTATCACTctgACACAGCCAACCCATGACTACTGGGGAGAGTTTGGAGCCTATGGGCCCTGCAGCCGCACCTGTGGCACAGGAGTGGCAATGCGAACTAGGAAATGTATCACTTCAAGGACAGATGGGGGACATAACTGCATAGGCTCCTCTAAGTCCTACCGAACCTGCAACACACATGAATGTCCAGTTGGATCAAGGGACTTCAGGGAGGAGCAGTGCTCCCAGTTCGACAGAATAGACTTTCAGAGCAAGCGGCAGACATGGGTGCCTTATTATGGAGCATCCAATCCATGTGAGCTGACCTGTGTCCCAAGAGGAGAGAACTTCTTCTACCGACACAGACCTGCAGTGGTGGATGGCACACCATGCTACGTGGGCCGCACTGATATCTGTGTGGACGGCATCTGCAGGATACTGATCCAGGGAGAGTTTATGGGCTTGGATGAGGACACTAATTCCGTACACTCTGCTGCCCCCATTGCTGTTGCTCCTCACCCAAGGGAGACACTCACATATATCTACAAAACTGGTGTCTATGGACAATGCTCTGCCTCATGCAATGGAGGCATGCAGTATCGCAACGTGGAGTGTTGGGTTCAGGACCCAGTGAACCCCCGTGTGGTGGAAGAGTCTTACTGCATCACCCAGCGCCTGCAGAGGCCACACAGCCAGCAGGCCTGCAACATGCATCCGTGTGCTGCGGAGTACAGTGTCTCCAGCTTCAGTGTGTGCTCGGTGACTTGTGGGGAGGGCCAGCAGACAAGGGAGGTGACCTGTGTTGGGTCGGGTGGTGAACGTCTGGCTGACCATGCCTGTAGTGGATTGGCAAAACCCCCTTCTGTCCAGTCCTGCCGCAGACCtgcctgtcacacacacatcacctgGCATGTGACTGACTACGGACTGTGCACCAGAAGCTGCGGTGGTGGTgtgagggagaggagagtgggCTGTTTTGATACAGATTTAAACCCTTACTCAGAGGCCCGCTGTGGAACAGCTAGCAGACCTCTCTCTGTGGAGACATGCAACTCACAGCCATGTCCCAGAGCACAGATGGTCCCAAGTGTACAGGACCCAAGGGCACATGAAAGCACCATAAGAGGATTTGTGCCCCATGTTCCAGGAGACCCTTCAGCTTCCATGCCACAGACAAACATTGCTACCTACCCTCCTGTGATTGGTCCTCACTGTGCACAGTCATTCTATGGCTGCTGTCCTGACGGCCAAACCTCTGCCACAGGGCCCAGGAATGAGGGCTGCTCCCAAGATGACTGTGTTCGCACTAGGTATGGCTGTTGTTTGGATGGTGTGACTCCAGCTCAAGGATTTGGAAGGGCTGGATGTCCCGAGTACCTGACAGCTGTGCAACAACCACCACCTCCTGCCCATCCATCCACTGGTAATATGTGCTCCATGCCTCGTGATGAGGGCCCCTGTGATACTTGGATGGTTCGCTTCTACTATGACTCAGGCACTGGCAAATGTACTGAGTTCTGGTATGGAAGCTGCCAGGGAAATGCTAATAACTTTGGGTCCCTGGAAGCATGCCAGAGAGAGTGTGGGGGTGTGGCAACCCCAAGAGGGACCCCAAGGAGAGGGTCAACCAGTGGTGCTTTGAGGGCAAGGTCATAACCATGCTCACCACTAATGCCTCCAAATCAGGGCCATCTCTATGAAGCTATTACGTGATATTTGTACACACGTAGTATTTACATAtatgaagacacacacaaacatgtattaAAACTAACCACATCCTGCCTTTCATTTAAACATCAgactttacataaaaaaattatctaGATAGTCTAACATTATATGTGACATAATTGCAGCTGATGGTTCTGATTTTCTTATCTTTTTGTGATGCTCAGTATATATTCacttatatatttttacttttagatCTGGACTACAATAAAATAATGTCAATGTGATTACCCAAGTTAAATCATCGACCTAATCAATAAAAATTGTGTGGTTTA
>XM_039782591.1
CTCATCAGTAGTTCTGCTGTAGCTTCTGGTGAAAATGAAGACCCTACAAGTCCTGGTTCTCCTACAGCTGCTGGTTGTACCTGCTATCACTctgACACAGCCAACCCATGACTACTGGGGAGAGTTTGGAGCCTATGGGCCCTGCAGCCGCACCTGTGGCACAGGAGTGGCAATGCGAACTAGGAAATGTATCACTTCAAGATGGGGGACATAACTGCATAGGCTCCTCTAAGTCCTACCGAACCTGCAACACACATGAATGTCCAGTTGGATCAAGGGACTTCAGGGAGGAGCAGTGCTCCCAGTTCGACAGAATAGACTTTCAGAGCAAGCGGCAGACATGGGTGCCTTATTATGGAGCATCCAATCCATGTGAGCTGACCTGTGTCCCAAGAGGAGAGAACTTCTTCTACCGACACAGACCTGCAGTGGTGGATGGCACACCATGCTACGTGGGCCGCACTGATATCTGTGTGGACGGCATCTGCAGGATACTGATCCAGGGAGAGTTTATGGGCTTGGATGAGGACACTAATTCCGTACACTCTGCTGCCCCCATTGCTGTTGCTCCTCACCCAAGGGAGACACTCACATATATCTACAAAACTGGTGTCTATGGACAATGCTCTGCCTCATGCAATGGAGGCATGCAGTATCGCAACGTGGAGTGTTGGGTTCAGGACCCAGTGAACCCCCGTGTGGTGGAAGAGTCTTACTGCATCACCCAGCGCCTGCAGAGGCCACACAGCCAGCAGGCCTGCAACATGCATCCGTGTGCTGCGGAGTACAGTGTCTCCAGCTTCAGTGTGTGCTCGGTGACTTGTGGGGAGGGCCAGCAGACAAGGGAGGTGACCTGTGTTGGGTCGGGTGGTGAACGTCTGGCTGACCATGCCTGTAGTGGATTGGCAAAACCCCCTTCTGTCCAGTCCTGCCGCAGACCtgcctgtcacacacacatcacctgGCATGTGACTGACTACGGACTGTGCACCAGAAGCTGCGGTGGTGGTgtgagggagaggagagtgggCTGTTTTGATACAGATTTAAACCCTTACTCAGAGGCCCGCTGTGGAACAGCTAGCAGACCTCTCTCTGTGGAGACATGCAACTCACAGCCATGTCCCAGAGCACAGATGGTCCCAAGTGTACAGGACCCAAGGGCACATGAAAGCACCATAAGAGGATTTGTGCCCCATGTTCCAGGAGACCCTTCAGCTTCCATGCCACAGACAAACATTGCTACCTACCCTCCTGTGATTGGTCCTCACTGTGCACAGTCATTCTATGGCTGCTGTCCTGACGGCCAAACCTCTGCCACAGGGCCCAGGAATGAGGGCTGCTCCCAAGATGACTGTGTTCGCACTAGGTATGGCTGTTGTTTGGATGGTGTGACTCCAGCTCAAGGATTTGGAAGGGCTGGATGTCCCGAGTACCTGACAGCTGTGCAACAACCACCACCTCCTGCCCATCCATCCACTGGTAATATGTGCTCCATGCCTCGTGATGAGGGCCCCTGTGATACTTGGATGGTTCGCTTCTACTATGACTCAGGCACTGGCAAATGTACTGAGTTCTGGTATGGAAGCTGCCAGGGAAATGCTAATAACTTTGGGTCCCTGGAAGCATGCCAGAGAGAGTGTGGGGGTGTGGCAACCCCAAGAGGGACCCCAAGGAGAGGGTCAACCAGTGGTGCTTTGAGGGCAAGGTCATAACCATGCTCACCACTAATGCCTCCAAATCAGGGCCATCTCTATGAAGCTATTACGTGATATTTGTACACACGTAGTATTTACATAtatgaagacacacacaaacatgtattaAAACTAACCACATCCTGCCTTTCATTTAAACATCAgactttacataaaaaaattatctaGATAGTCTAACATTATATGTGACATAATTGCAGCTGATGGTTCTGATTTTCTTATCTTTTTGTGATGCTCAGTATATATTCacttatatatttttacttttagatCTGGACTACAATAAAATAATGTCAATGTGATTACCCAAGTTAAATCATCGACCTAATCAATAAAAATTGTGTGGTTTA

Function

NR:

description
papilin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782589.1 True 2411 mRNA 0.49 13 21938478 21944082
XM_039782590.1 False 2384 mRNA 0.49 13 21938478 21944082
XM_039782591.1 False 2068 mRNA 0.50 12 21939012 21944082

Neighbor

gene id symbol gene type direction distance location
LOC120547078 NA coding upstream 94922 21834478 ~ 21843556 (+)
LOC120547079 NA coding upstream 128804 21806015 ~ 21809674 (+)
LOC120546759 NA coding upstream 183588 21751292 ~ 21754890 (+)
LOC120546757 NA coding upstream 211136 21723642 ~ 21727342 (+)
acat2 acat2,LOC102788057 coding upstream 245352 21687280 ~ 21693126 (+)
smek1 ppp4r3a,LOC102789800 coding downstream 3217 21947299 ~ 21961671 (+)
LOC120546953 eva1a coding downstream 188759 22132841 ~ 22211477 (+)
LOC120546308 NA coding downstream 268428 22212510 ~ 22221145 (+)
LOC120546584 prep,LOC100698444,LOC102792678,LOC104927043 coding downstream 314515 22258597 ~ 22270747 (+)
LOC120546233 sim1,LOC103374615 coding downstream 494639 22438721 ~ 22450064 (+)
LOC120547080 NA non-coding upstream 104696 21832948 ~ 21833782 (+)
LOC120546760 NA non-coding upstream 191924 21745581 ~ 21746554 (+)
G186297 NA non-coding upstream 395697 21540588 ~ 21542781 (+)
G186220 NA non-coding upstream 463174 21474552 ~ 21475304 (+)
G186210 NA non-coding upstream 589897 21347944 ~ 21348581 (+)
G186452 NA non-coding downstream 350360 22294442 ~ 22294697 (+)
G186506 NA non-coding downstream 591577 22535659 ~ 22537716 (+)
G186578 rhob,LOC104947257 non-coding downstream 772888 22716970 ~ 22719893 (+)
G186622 NA non-coding downstream 855653 22799735 ~ 22800058 (+)
G186641 NA non-coding downstream 902790 22846872 ~ 22847674 (+)
gtf2h5 gtf2h5 other upstream 765839 21170948 ~ 21172639 (+)
kif25 LOC104961976,LOC100703631 other upstream 2078261 19852643 ~ 19860217 (+)
acp1 acp1 other upstream 2290322 19633500 ~ 19648156 (+)
zgc:193593 NA other upstream 2317695 19572573 ~ 19620783 (+)
nhsl1b nhsl1,LOC101470763 other upstream 2396646 19429595 ~ 19541832 (+)
erh erh,LOC100699790,LOC101174968 other downstream 661 21944743 ~ 21947000 (+)
G186394 mycn,LOC108233328 other downstream 41697 21985779 ~ 22065589 (+)
lin28b lin28b other downstream 336885 22280967 ~ 22301585 (+)
kcns3b kcns3,LOC103372653 other downstream 863797 22807879 ~ 22810520 (+)
si:ch211-22i13.2 NA other downstream 1017951 22962033 ~ 22966010 (+)

Expression


Co-expression Network