stx7l (stx7)


Basic Information

Item Value
gene id stx7l
gene name stx7
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 15730047 ~ 15738980 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782619.1
CGTATTGTCACAATATTCgttttcagtgttttctgttgttgttgctataTAGCCGTTCCTTTGTCATAAAGTCATTTCTACCAGTGATTTTTGCCTCCATTGCTCCAGACATCATGTGACGGGGGAGGGGCAGAGAATCAGGaaacacactgctgctgctgctgctgctgcaagtCACAAGAAAGCTCTCCATCATGGCCTACCAGGCTGGGTCTCCAGAGGAGCCCAGTGCTTTGGTTCACAATATCAGTTCCAACATCCAGAAGCTGACGCTGCtgaCCTCGGAGCTGCAGAGGGCAGTTTCTCTGCTTGGAACAGAGCAAGACAGCAGCCAGCTACGACAGACGCTgcaacagaaacaacaGCAAGGCAACCAGCTAGCGAAGGAGACTGACAGACTGATCAAGGCATTCAGTGCACTTCCTGTTGGCCCAGATCAGCGGCAGAGGAAGATACAAAAAGAGCGTCTGGTGAATGACTTCTCCGCTGCCCTGAACAGCTTCCAGAAGACCCAGCGGCAGGCGGCCAACcaagagagagagtttgtggcCAGAGTCCGAGCCAGCTCCAGGGTTTCGGGAGGACACCCTGATGACAGCTTTGGAAATGTGCCTAATTTCCTTGGTGATTCTCAGGTGCAGGCTCAGACTGAGGCCATCACTGAAGAAGACTTGAGGCTGATCCAGGAGAGAGAGTCGTCCATCAGGCAGTTGGAGTCGGACATCACCGATATCAATGACATCTTCAAGGACCTGGGGATGATGGTCCATGAGCAGGGAGACATGATAGACAGTATAGAAGCCAATGTGGAGAATGCAGATGTGAATGTCCAGAGCGCCACACAGCAGCTGGCACGTGCTGCAGACTATCAGCGGAGCTCCCGGAAGAAGATATGCATCCTGATGATATTGTTGGCTGTAGTTGCTGTTGTTATTGGACTTATCATCTGGGGCGCAGTCAAAAAATGagggcttcttcttcttcccctcCTCCACCTCTCCGGTTTAGTCATCAGCCTGGACAAAGGATTGAGCACCGTCCTtcctctcctcatcctcctccttttctccccCCCCATGGGACTGtcaatgggagtcaatgggactgtctgtctttctttgacttgatttatattttaaagatgTTGCATTCCTCATTGACAGGAAAACACACTCCTTCACTGTGAAAACAAAACGAGCGCTGGTTGCTTTATTGTTATAATCAGCTTTAattgaattcttttttttatttaggcatGATTGTCCTGTAACACAGGACAGGTGCAGCCATGTTAGCTACCCCTCTACCGAACGTTCAATAAGATACAATACAGACAATGCTTCTGGGTGCAATGAAGCAGCAAGTTGCTGTAGGCAGGTAAGAGGGAATTAACCTTCAGATCAGTTATATTGCTGCAGCTGCTTTCTTTTATCAGGTCAGATATGAACAATTAAAACCATGTATCAAGTGCACTCTGTAAATTTGGGAGTAAAGTCAGCCTTGGTCCATAGCACAATAAAGCCAAACTGCATTCAGCTTATTGCAATGCATTATTTCCTGtatttaaaattgtaattaattaaaatgactAGCTAATTTCTATTCAAATTGATGTAGTTGTAATTTTTTGATAGATCCATACTAAATCTTGTGATTTGGACCTTATATTACACTCCACTGTCAGCCAGCTATTCCAAGtaagtttctttttcttttgtaaatgCAACACATAATCGTTTGAGTTGTGTTTTATGGTTTGTTTAACTGTACTTCGGTATGCTTCTTTTAAAGAAACCACACAGGTGTCTTCAATTTTCTGGCTGATTAGAGCTCGTTACACGTTGCAGGTGGGCCAGAGCTGCGTCAATCAGTCGTGGTCTAGTCAGCCAGTCTAAGtggaaacacctgtgtgggggCTTTACTCATAGGAAAGTACCGACAGTCAATTATCATTATTTCTCTGTGATTGACAACCCACAGTAACCGTCGTTTTTCCTGATATGAAGAAACCACAACCCAAAGTAAATAAATTGAAACCAAACACTACAAACTATTTGCTACTACTATTtgacatatgtaaaattatgaTCACATGTATATTTTCAATATTGAGATTTGGCTGCCTaccatatataaataaattaccTGACTGTACTGAA

Function

symbol description
stx7 Enables chloride channel inhibitor activity and syntaxin binding activity. Involved in several processes, including positive regulation of T cell mediated cytotoxicity; positive regulation of receptor localization to synapse; and regulation of protein localization to plasma membrane. Located in cytoplasmic vesicle; immunological synapse; and perinuclear region of cytoplasm.

NR:

description
PREDICTED: syntaxin-7

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0016192 vesicle-mediated transport biological_process
GO:0016020 membrane cellular_component
GO:0005484 SNAP receptor activity molecular_function

KEGG:

id description
K08488 STX7; syntaxin 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782619.1 True 2159 mRNA 0.44 10 15730047 15738980

Neighbor

gene id symbol gene type direction distance location
zfyve1 LOC100698556 coding upstream 42320 15680461 ~ 15687727 (+)
chac1 chac1 coding upstream 125881 15602335 ~ 15604166 (+)
dll4 dll4,LOC104955063 coding upstream 132154 15588083 ~ 15597893 (+)
vrtn vrtn coding upstream 429340 15296281 ~ 15300707 (+)
slc25a29 LOC103369942,LOC106518591 coding upstream 443196 15277585 ~ 15286851 (+)
ccn2a ctgf coding downstream 33680 15772660 ~ 15776217 (+)
tmem200a tmem200a coding downstream 114830 15853810 ~ 15877749 (+)
itpkb itpkb coding downstream 247103 15986083 ~ 16014859 (+)
coq8aa coq8a coding downstream 277995 16016975 ~ 16042239 (+)
med23 med23 coding downstream 370372 16109352 ~ 16126914 (+)
G184508 pigh non-coding upstream 49888 15678997 ~ 15680159 (+)
G184509 vps18 non-coding upstream 74527 15654846 ~ 15655520 (+)
G184481 NA non-coding upstream 236520 15493204 ~ 15493527 (+)
G184474 NA non-coding upstream 250967 15478491 ~ 15479080 (+)
G184465 NA non-coding upstream 407159 15322575 ~ 15322888 (+)
G184521 NA non-coding downstream 38249 15777229 ~ 15780546 (+)
G184526 sel1l,LOC104966051,LOC107585782,LOC107721334 non-coding downstream 58835 15797815 ~ 15798794 (+)
G184561 NA non-coding downstream 150385 15889365 ~ 15889585 (+)
G184540 NA non-coding downstream 187091 15926071 ~ 15927662 (+)
G184584 NA non-coding downstream 306829 16045809 ~ 16047681 (+)
dpf3 LOC100693327,LOC101467145,LOC103380755,LOC104966071,LOC102779461 other upstream 10415 15694944 ~ 15719632 (+)
rhov rhov,LOC102778135,LOC100699098,LOC101469787,LOC102306362,LOC107602886 other upstream 66386 15660573 ~ 15663661 (+)
G184458 NA other upstream 411211 15301925 ~ 15318836 (+)
LOC120546207 NA other upstream 436795 15289674 ~ 15293252 (+)
hsp90aa1.1 LOC103369948 other upstream 595187 15129476 ~ 15134860 (+)
LOC120546249 NA other downstream 175606 15914586 ~ 15968123 (+)
nkain2 nkain2 other downstream 509114 16248094 ~ 16391851 (+)
cenpw NA other downstream 640499 16379479 ~ 16381856 (+)
G184628 LOC104949332,LOC106633454,LOC101477798,LOC102792991 other downstream 660458 16399438 ~ 16404077 (+)
vegfab vegfa other downstream 932606 16671586 ~ 16686079 (+)

Expression


Co-expression Network