LOC120547163 (LOC104959543,LOC108248898,LOC106958584,LOC103140751,LOC106529783,LOC106903326,LOC104922943)


Basic Information

Item Value
gene id LOC120547163
gene name LOC104959543,LOC108248898,LOC106958584,LOC103140751,LOC106529783,LOC106903326,LOC104922943
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 1391056 ~ 1394115 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782632.1
ATGGAGGAAGCCAGCGCCAACATCTTCGTCACTGTTCAGAAGATCTACTACCCTTTGCTTTGTGTCATGGGTATTCCAGCCAACCTCTTTACCTTCTACATGATCTGCTTCCGTAAATGCGGGATGTCCGACACGGCCATTATTTACCTGAGCTGCCTGGCCATCGTAGACACCTTCTACCTGGTGTGGGTGATCCTCATCGACTTGACCCTCACCTTCTGGCTACTGCAGCCCTTCTGGCACTCCCATCCCTGGTGTGGCATCCTGGGATTCCTGCAGTATGGATCGCTCTACAGCTCCTCCTGGATCGTGGTGGTGTTCACCATCGAGCGCTACCTCGTTCTTCGCAGCACAGCGGCCAAGCAGCACTTCTACCAGCCTTGGGTCACTAAAGTGACGTGCGTGGCTATCGTGTTGGTGTCACATGTTGTCTCTGTGCCCCTGGGCTGGATCAACACTGTCACACCTGTTAACTTGACAGTGGACGGGGAGAATATGACGCTGCCTCGGTGTCATTACCGCAATCACACCTACTCTACTGTCATAGTGTGGATAACTACCTTCCTCTCAGGAGGAGTCCCTATTGTGTTGGTCATCATCTTCAACTACCTCATCGGGTACCATCTGTGCCACGCCAGCAACCTCTTCACCAAGGAAGAGCGTCGCGTCATGCATGGGAGGAGCACCAGGGGCGTGTTGAGGAGGACCATCCTGCTGCTGGGCACCGTCTCCTTGGCCTTCGTCGTCCTAAGCCTGCCCCGCTTTGTTACATACTGCACCCTGAGGACCAAGTACAACCACGAGCACTTTAACCGGAACGACTACAGCATCCCCATCAATGTGGCCGGAGACTTGGCCAACATGCTGCAGAACCTCAACTCTACCACCAACTTCCTGCTCTACTGCATGGTCAGCCGGTGCTTCCGGCGGGAGCTGGTCCAAGTGGTGATTTGTAAGCCAAAGGCACTTAAGCTGAGCTCTGTCATCACCCACACCACCATGAAAGTCTTCTCAGTGGTAGATCATAAGGCCTCGCCATCCAGGGAGCCTGTGACTGTAGTGCTAACCAATCTCAAACTGATTGCAGAATAG

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 139

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782632.1 True 1092 mRNA 0.54 2 1391056 1394115

Neighbor

gene id symbol gene type direction distance location
traf3ip2a LOC102783323 coding downstream 5334 1374632 ~ 1385722 (-)
rev3l rev3l coding downstream 25619 1257395 ~ 1365437 (-)
cdk19 cdk19,LOC106533191 coding downstream 264727 1038758 ~ 1126329 (-)
tab2 tab2 coding downstream 381043 959505 ~ 1010013 (-)
ginm1 ginm1 coding downstream 481884 897931 ~ 909172 (-)
fynb fyn,LOC103458010,LOC106529781 coding upstream 5384 1399499 ~ 1516023 (-)
si:dkey-119m7.4 LOC100698612,LOC104922931,LOC102792392,LOC102205754,LOC102310158,LOC101479579 coding upstream 128162 1522277 ~ 1554183 (-)
tube1 tube1 coding upstream 145978 1540093 ~ 1577463 (-)
lama4 lama4 coding upstream 210828 1604943 ~ 1660558 (-)
LOC120547226 hs3st5,LOC102794156 coding upstream 641550 2035665 ~ 2163743 (-)
G181576 NA non-coding downstream 3214 1387574 ~ 1387842 (-)
G181575 NA non-coding downstream 3741 1387068 ~ 1387315 (-)
G181554 NA non-coding downstream 146581 1244156 ~ 1244475 (-)
G181553 NA non-coding downstream 146959 1240850 ~ 1244097 (-)
LOC120546998 NA non-coding downstream 203417 1184548 ~ 1187639 (-)
G181584 NA non-coding upstream 135130 1529245 ~ 1529717 (-)
G181564 NA non-coding upstream 196166 1590281 ~ 1604825 (-)
G181597 LOC104947167 non-coding upstream 287926 1682041 ~ 1682416 (-)
G181599 NA non-coding upstream 288924 1683039 ~ 1683419 (-)
G181610 NA non-coding upstream 402141 1796256 ~ 1796671 (-)
G181297 NA other downstream 751543 638810 ~ 639513 (-)
G181206 NA other downstream 1311746 57976 ~ 79310 (-)
G181196 NA other downstream 1342303 47081 ~ 48753 (-)
G181860 NA other upstream 1981650 3375765 ~ 3376108 (-)
G181919 bach2 other upstream 2214732 3608847 ~ 3610329 (-)
srp9 srp9 other upstream 2497522 3891637 ~ 3893175 (-)
G182061 NA other upstream 2512502 3906617 ~ 3912279 (-)
G182059 NA other upstream 2514432 3908547 ~ 3914015 (-)

Expression


Co-expression Network