Gene
RNA
| Item | Value |
|---|---|
| gene id | bmp2b |
| gene name | bmp2 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 13981265 ~ 13987401 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| bmp2 | Enables several functions, including BMP receptor binding activity; co-receptor binding activity; and phosphatase activator activity. Involved in several processes, including regulation of cellular biosynthetic process; regulation of signal transduction; and transmembrane receptor protein serine/threonine kinase signaling pathway. Acts upstream of or within several processes, including animal organ development; positive regulation of cellular metabolic process; and regulation of transmembrane receptor protein serine/threonine kinase signaling pathway. Located in cell surface; extracellular space; and intracellular membrane-bounded organelle. Part of BMP receptor complex. Implicated in bone disease (multiple); hemochromatosis type 1; otosclerosis; prostate cancer; and tooth agenesis. Biomarker of prostate cancer and prostate carcinoma. |
| description |
|---|
| PREDICTED: bone morphogenetic protein 2 |
| id | name | namespace |
|---|---|---|
| GO:0001710 | mesodermal cell fate commitment | biological_process |
| GO:0060876 | semicircular canal formation | biological_process |
| GO:0055015 | ventricular cardiac muscle cell development | biological_process |
| GO:0001503 | ossification | biological_process |
| GO:0045168 | cell-cell signaling involved in cell fate commitment | biological_process |
| GO:0051216 | cartilage development | biological_process |
| GO:0048264 | determination of ventral identity | biological_process |
| GO:0030509 | BMP signaling pathway | biological_process |
| GO:0040007 | growth | biological_process |
| GO:0007368 | determination of left/right symmetry | biological_process |
| GO:0001889 | liver development | biological_process |
| GO:0060030 | dorsal convergence | biological_process |
| GO:0030903 | notochord development | biological_process |
| GO:0042664 | negative regulation of endodermal cell fate specification | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005125 | cytokine activity | molecular_function |
| GO:0042803 | protein homodimerization activity | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| GO:0008083 | growth factor activity | molecular_function |
| id | description |
|---|---|
| K21283 | BMP2; bone morphogenetic protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039782651.1 | True | 2031 | mRNA | 0.52 | 3 | 13981265 | 13987401 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fermt1 | fermt1 | coding | downstream | 24127 | 13946704 ~ 13957138 (-) |
| trmt6 | trmt6 | coding | downstream | 36432 | 13938613 ~ 13944833 (-) |
| LOC120546266 | slc23a2,LOC100699458,LOC101468039,LOC108231760,LOC106518547,LOC102297661 | coding | downstream | 63141 | 13911571 ~ 13918124 (-) |
| gpcpd1 | gpcpd1 | coding | downstream | 71133 | 13889340 ~ 13910132 (-) |
| napbb | napb,LOC103381049,LOC102194491,LOC102306363,LOC106518545,LOC102225024,LOC103457862,LOC107097573,LOC107378120 | coding | downstream | 94095 | 13877232 ~ 13887170 (-) |
| pak5 | pak5,LOC102790572 | coding | upstream | 257040 | 14244441 ~ 14322141 (-) |
| LOC120547016 | LOC103375044,LOC104947369,LOC101079388,LOC102209315 | coding | upstream | 348238 | 14335639 ~ 14359390 (-) |
| magl | NA | coding | upstream | 373112 | 14360513 ~ 14378555 (-) |
| LOC120546406 | NA | coding | upstream | 392613 | 14380014 ~ 14381177 (-) |
| LOC120546407 | NA | coding | upstream | 400119 | 14387520 ~ 14388443 (-) |
| G184162 | NA | non-coding | downstream | 138788 | 13842272 ~ 13842477 (-) |
| LOC120546199 | NA | non-coding | downstream | 582690 | 13339183 ~ 13398575 (-) |
| G184049 | NA | non-coding | downstream | 662335 | 13318488 ~ 13318930 (-) |
| G184026 | NA | non-coding | downstream | 730829 | 13249591 ~ 13250436 (-) |
| G183981 | NA | non-coding | downstream | 946768 | 13034252 ~ 13034497 (-) |
| G184204 | plcb1 | non-coding | upstream | 131621 | 14119022 ~ 14141806 (-) |
| G184208 | NA | non-coding | upstream | 200027 | 14187428 ~ 14231705 (-) |
| G184217 | plcb4 | non-coding | upstream | 235574 | 14222975 ~ 14225219 (-) |
| LOC120546499 | NA | non-coding | upstream | 251025 | 14238426 ~ 14243275 (-) |
| G184224 | NA | non-coding | upstream | 261813 | 14249214 ~ 14328936 (-) |
| mfsd2b | mfsd2b | other | downstream | 490122 | 13473683 ~ 13491143 (-) |
| fkbp1b | fkbp1b | other | downstream | 513200 | 13458602 ~ 13468065 (-) |
| runx2b | runx2,LOC102312376 | other | downstream | 677481 | 13255885 ~ 13303784 (-) |
| hmgn3 | hmgn3,LOC104958971 | other | downstream | 765365 | 13145464 ~ 13215900 (-) |
| LOC120547209 | NA | other | downstream | 973397 | 12960498 ~ 13007868 (-) |
| G184299 | LOC101066055,LOC100706360,LOC102203025 | other | upstream | 484800 | 14472201 ~ 14498370 (-) |
| naa30 | naa30,LOC102795089,LOC104960600 | other | upstream | 583979 | 14571380 ~ 14612946 (-) |
| LOC120547045 | LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 | other | upstream | 669776 | 14657177 ~ 14667601 (-) |
| rps29 | NA | other | upstream | 1122839 | 15110240 ~ 15111479 (-) |
| si:dkey-177p2.18 | LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 | other | upstream | 1801425 | 15788826 ~ 15795638 (-) |
