LOC120547180



Basic Information


Item Value
gene id LOC120547180
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 4480829 ~ 4485479 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039782655.1
ATGGACAAGCGACATCCGGCAAAGAAAAGGAATTTCACTGAGGTAGAAATAGAGACGCTCACGTCTCAGGTGGAGGCCAACCGCTTGGTCTTATTTGGAAGCTTAAAATCAGGCATCAAAGGATCAAGGAAAAATGCGACGTGGACTCAGGTTACTGCTGCAGTCAACAGCGTTTCTGCGGCCTTCTCTGGGGTGGATAGCAGAGTCCCCCCCACTGACCCAAGACGGAGCCACCTGTCCTTGAGCAAACCTGTGCTTCGCTTCACTGTGgttcgtgtgcgtgtgtgcacacTGTTGAACCTGTGCTCCTGCTCTGTTTGGGGATTTGCAAGCAGTGTTATAAAGCTGACTACGCACACCATCATTCCACTATCAGCTCTCCCGCTGTGCACACCTGCCGGCCATCTACAATCAAGCCCAGTATTTGAACCCTGGATCCACTCATCATCTTTGCTTGATCATTGCTTCAGTTGTCCTGCCATCTTCTCCATACCGCTCTGTTACATCCAGTCAGCTGGCTCCGCCATTTGGTCCCCTCCTCACGGCTCCCTGCTCCATCCTGCCTCAGCTCCTGCTCCCAGCTGTCCACTCTTTGACTCCCCTGTTCCCCCGAACCCCAGTACCTCCTCCTCGGCTCCCCTCGGCACCGGTTTCTCCGCGCTCCCTTGCCGTCCCATCCCCAGTGAGTCCATCGTCATCCTACCCCAGCAAGCTCCTCAAAacctttaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039782655.1 True 729 mRNA 0.54 4 4480829 4485479

Neighbor


gene id symbol gene type direction distance location
ube2j1 ube2j1 coding downstream 5727 4407988 ~ 4475102 (-)
LOC120547149 LOC103361227,LOC102782649 coding downstream 80230 4360202 ~ 4400599 (-)
LOC120547177 NA coding downstream 284469 4195143 ~ 4196360 (-)
LOC120547172 NA coding downstream 295871 4177573 ~ 4184958 (-)
trnad-guc_28 NA coding downstream 301889 4178869 ~ 4178940 (-)
cfap206 cfap206,LOC104962646,LOC104951787 coding upstream 149064 4634543 ~ 4654939 (-)
LOC120547250 LOC104919706,LOC106571281 coding upstream 170377 4655856 ~ 4681570 (-)
si:ch211-241j12.4 LOC103354013 coding upstream 200054 4685533 ~ 4702724 (-)
rad51 rad51 coding upstream 245909 4731388 ~ 4741645 (-)
cenpe cenpe coding upstream 257665 4743144 ~ 4784318 (-)
G182156 NA non-coding downstream 76562 4404025 ~ 4404267 (-)
G182155 NA non-coding downstream 85824 4394573 ~ 4395005 (-)
G182137 NA non-coding downstream 196670 4283960 ~ 4284159 (-)
trnad-guc_27 NA non-coding downstream 305803 4174955 ~ 4175026 (-)
trnad-guc_26 NA non-coding downstream 309676 4171082 ~ 4171153 (-)
G182182 NA non-coding upstream 42537 4528016 ~ 4529058 (-)
LOC120546262 NA non-coding upstream 60689 4546168 ~ 4554488 (-)
G182202 NA non-coding upstream 105314 4590793 ~ 4591004 (-)
G182276 rmdn3 non-coding upstream 234438 4719917 ~ 4721769 (-)
G182302 NA non-coding upstream 323599 4809078 ~ 4809580 (-)
G182121 NA other downstream 314833 4163358 ~ 4165996 (-)
trnav-aac_21 NA other downstream 324997 4155760 ~ 4155832 (-)
trnav-aac_20 NA other downstream 331851 4148907 ~ 4148978 (-)
G182102 NA other downstream 380349 4100010 ~ 4100480 (-)
G182059 NA other downstream 566814 3908547 ~ 3914015 (-)
smim8 smim8 other upstream 260294 4745773 ~ 4803492 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other upstream 826027 5311506 ~ 5313715 (-)
G182474 NA other upstream 1304810 5790289 ~ 5792938 (-)
G182502 NA other upstream 1425833 5911312 ~ 5911909 (-)
cgrrf1 NA other upstream 1747263 6232742 ~ 6269143 (-)

Expression



Co-expression Network