si:ch211-241j12.4 (LOC103354013)


Basic Information

Item Value
gene id si:ch211-241j12.4
gene name LOC103354013
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 4685533 ~ 4702724 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782659.1
AGCGGCCAGTCGGCGGTGGGGTTATCGCAGAGACAGACGCCGCTCAATAGATGCAACATGGCGGAGAAAGGCAGCGAGCAGCCGCGGTCCACCCGGCGTTGTTTCCCAGCACCGCAGTAGAACTGTTCTGTGTCGGCCTGGACGGAATAAAGTAGTTGTCCGGTCCGGTCCCTCGGCTACGAGTTTACTTTGCCCACTTTTAGGAGGAAAAACTTGTGAAAATGAGCCGCGAGTGAGGAATTCAAGATGAGCCGACACGCAACAGACGTACCGGAGTGTGCCCCCTCCCCGCCGCTGCCTGCTGATCATGTGCTCAACTCTGCAGCCGTGTTATTCCCTGGTGCCTTTGATCGACATGGCTGCCCTTTGATCGTGTTCCCAGCGGATGAACAAGCCAAACTCTCAGAACTCAGCAAAGCAGAAGTGGTGGACTTCATAAATTACTTTCTGTGTCTGCACAATAAGAAGCAGGAGAAGGAGGGTTTGGTGTCGGTGGTGGCTGATCTGAGGCACGCCTCGCTCCCTACCACCAGGTTCATCGCTGAGACTCTGCTTCAGCTTGAGcTGCACAAGCGGACAGTCCACAGTGTGTACCTAGTTCAGCCCAAAAAGAAGGAGGTTGCCAAGCTGTTGCTCAAACTCCTGGCTCCGGCAAGGTCTCACACTGCCTCTTTCAAGAAAGTCCTTCTAAAAGAAACCTCGGAGCTCTCCAACTACATTGACCGAAGCCAGCTAACGGCAGCTTTGGGAGGCTACCTTATTTACTGTCACAAGAGTTGGGTGGCCTTCATCAAGGAGATCGATGACTTTGTCCAGGAGTTCCTGTCTGTGGTCCAGCGGCTGCCCTCGTGTATCTCCAGCCTCAAGTCTCTGTCCCGGCTGCCGGTGCCCTCCACCTTCAGCGAGCTCCAACACTTCTGCTCCACCAACGAGGCCAAGTTCCAGAAGCTCAGGAGAGAGCTGGGGCTGGATGAACTGTTGAGGCACTGCGAGAGTGTGGTGGAGAAGCTGCGTTACCCTGAGAAGGAGCCGTGCTACCAGGCGATGGCTGGCACTGCCCTCTTCACCCACACCGCCTTCGACATGCTCCAGAACCACAGCAGGATAACTGCAGCAGTGGAAAAAGTGGAACTGCTGTGGCAGCAGGCCTTTTCCCcgcccctctccccctcccgtTTTTTTCTCTTCCCGCGGCCCCCTTCCCCTTTGGGTGTGGACAACGGTTTGGGTCGGAGGCTGCTTTCACGCCTAACCGGTTTGTCACCGTAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC103354013

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782659.1 True 1269 mRNA 0.56 9 4685533 4702724

Neighbor

gene id symbol gene type direction distance location
LOC120547250 LOC104919706,LOC106571281 coding downstream 3963 4655856 ~ 4681570 (-)
cfap206 cfap206,LOC104962646,LOC104951787 coding downstream 30594 4634543 ~ 4654939 (-)
LOC120547180 NA coding downstream 200054 4480829 ~ 4485479 (-)
ube2j1 ube2j1 coding downstream 210431 4407988 ~ 4475102 (-)
LOC120547149 LOC103361227,LOC102782649 coding downstream 284934 4360202 ~ 4400599 (-)
rad51 rad51 coding upstream 28664 4731388 ~ 4741645 (-)
cenpe cenpe coding upstream 40420 4743144 ~ 4784318 (-)
znf292b NA coding upstream 116423 4819147 ~ 4853083 (-)
LOC120546227 htr1e coding upstream 168418 4871142 ~ 4914191 (-)
LOC120546193 NA coding upstream 412455 5115179 ~ 5123781 (-)
G182202 NA non-coding downstream 94529 4590793 ~ 4591004 (-)
LOC120546262 NA non-coding downstream 131045 4546168 ~ 4554488 (-)
G182182 NA non-coding downstream 156475 4528016 ~ 4529058 (-)
G182156 NA non-coding downstream 281266 4404025 ~ 4404267 (-)
G182155 NA non-coding downstream 290528 4394573 ~ 4395005 (-)
G182276 rmdn3 non-coding upstream 17193 4719917 ~ 4721769 (-)
G182302 NA non-coding upstream 106354 4809078 ~ 4809580 (-)
G182317 NA non-coding upstream 115975 4818699 ~ 4818962 (-)
G182325 NA non-coding upstream 211760 4914484 ~ 4914701 (-)
G182329 NA non-coding upstream 272840 4975564 ~ 4975936 (-)
G182121 NA other downstream 519537 4163358 ~ 4165996 (-)
trnav-aac_21 NA other downstream 529701 4155760 ~ 4155832 (-)
trnav-aac_20 NA other downstream 536555 4148907 ~ 4148978 (-)
G182102 NA other downstream 585053 4100010 ~ 4100480 (-)
G182059 NA other downstream 771518 3908547 ~ 3914015 (-)
smim8 smim8 other upstream 43049 4745773 ~ 4803492 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other upstream 608782 5311506 ~ 5313715 (-)
G182474 NA other upstream 1087565 5790289 ~ 5792938 (-)
G182502 NA other upstream 1208588 5911312 ~ 5911909 (-)
cgrrf1 NA other upstream 1530018 6232742 ~ 6269143 (-)

Expression


Co-expression Network