LOC120547207


Basic Information

Item Value
gene id LOC120547207
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 12978663 ~ 12979999 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782686.1
CTTTCACAGGATCACAGTGGTACCTGAGCTGTTCATTCAACATTATGGCTGTTTGGTGTACTGCTGGGGCTTTGCTCCTTGTTTTGCTGactggtttgattgacagctacCCTATGCAGCAAGCTCAGTCCAGTTTTCAGAATGCACCTCCAGGATATGCTCAAGGCTCTTCTGCAGGCCCTGCCTCTAAACAAGGCATTTCCTGGGCTGTTGCACCTCCCAGTCCCTTTTCTGCTGGAGCATCCACAGGACCTAGCACTCAGCAGTTTGCTGCCAGTGGACCTGCCCTTCGACCACTTGGCCTTAACTTTGTGATCCAGCCTGACTATCTTCTTCCACAGTACCAGGCAGGGGAACTTTTCCAGGAACAGAAAAGATTCGAGCAAGGCAACTCTGAATCTGAGAGCGAAGCGCAAGGTTCCATGCCACCACCTCGTTTTGTCTATGCTGCACAGCCTTCACAAGGCTTTAATGGAGGACCTGTGCCATCAGGCCTGGTCCCATATCCTTACCCTTCCTATGACTACATGTTCCTGAATGGCCAGTATCCTCCAGGCACGTATACATACACCAGCAACAGCGTTGAGCAGGGGAGGGACAGGTGGGATGACGCTCTCTACACAAGGGATAATTATCCCAGCACTAAGCAGGCCAAGAACATCCCTTATAGACATCGCACCGTCAGGCAGGCGAGTATGGGGAGTGCTAGTCAGAGTGGTGCAGCGACTGGACAACAGCAGCCCTACAGTGGAGTTGGTGTACGAGGTTCTTACTCGCAGCCGGGTCGACGCCGCCGGGGAGCTCCAAGAGCATTCATGCAAAAGGTTGGCTAAAGGTGACTCTGAAGTCTTGTCAATAAAGAATATAACTTTTA
>XM_039782687.1
TGTTCATTCAACATTATGGCTGTTTGGTGTACTGCTGGGGCTTTGCTCCTTGTTTTGCTGactggtttgattgacagctacCCTATGCAGCAAGGCATTTCCTGGGCTGTTGCACCTCCCAGTCCCTTTTCTGCTGGAGCATCCACAGGACCTAGCACTCAGCAGTTTGCTGCCAGTGGACCTGCCCTTCGACCACTTGGCCTTAACTTTGTGATCCAGCCTGACTATCTTCTTCCACAGTACCAGGCAGGGGAACTTTTCCAGGAACAGAAAAGATTCGAGCAAGGCAACTCTGAATCTGAGAGCGAAGCGCAAGGTTCCATGCCACCACCTCGTTTTGTCTATGCTGCACAGCCTTCACAAGGCTTTAATGGAGGACCTGTGCCATCAGGCCTGGTCCCATATCCTTACCCTTCCTATGACTACATGTTCCTGAATGGCCAGTATCCTCCAGGCACGTATACATACACCAGCAACAGCGTTGAGCAGGGGAGGGACAGGTGGGATGACGCTCTCTACACAAGGGATAATTATCCCAGCACTAAGCAGGCCAAGAACATCCCTTATAGACATCGCACCGTCAGGCAGGCGAGTATGGGGAGTGCTAGTCAGAGTGGTGCAGCGACTGGACAACAGCAGCCCTACAGTGGAGTTGGTGTACGAGGTTCTTACTCGCAGCCGGGTCGACGCCGCCGGGGAGCTCCAAGAGCATTCATGCAAAAGGTTGGCTAAAGGTGACTCTGAAGTCTTGTCAATAAAGAATATAACTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782686.1 True 874 mRNA 0.52 5 12978663 12979999
XM_039782687.1 False 773 mRNA 0.52 4 12978663 12979970

Neighbor

gene id symbol gene type direction distance location
LOC120547206 NA coding downstream 20852 12956473 ~ 12957811 (-)
LOC120547205 NA coding downstream 30341 12946958 ~ 12948322 (-)
LOC120546273 NA coding downstream 230925 12746386 ~ 12747738 (-)
ccnk ccnk coding downstream 275479 12695937 ~ 12703184 (-)
trnat-ugu_2 NA coding downstream 395422 12583169 ~ 12583241 (-)
LOC120547210 NA coding upstream 10576 12990575 ~ 12991921 (-)
LOC120546166 LOC103355735,LOC104963358,LOC100702431,LOC102289960,LOC108231778 coding upstream 18090 12998089 ~ 13015227 (-)
si:dkey-261l7.2 LOC103457838,LOC106927103,LOC106964160,LOC103148020 coding upstream 161456 13141455 ~ 13145095 (-)
LOC120546943 phip coding upstream 168652 13148651 ~ 13202337 (-)
mut mut coding upstream 457071 13437070 ~ 13458215 (-)
G183952 NA non-coding downstream 55856 12841032 ~ 12922807 (-)
LOC120546274 NA non-coding downstream 92888 12884370 ~ 12885775 (-)
G183910 NA non-coding downstream 347871 12588138 ~ 12630792 (-)
G183908 NA non-coding downstream 351957 12592618 ~ 12626706 (-)
G183898 NA non-coding downstream 418888 12540583 ~ 12559775 (-)
G183981 NA non-coding upstream 54253 13034252 ~ 13034497 (-)
G184026 NA non-coding upstream 269592 13249591 ~ 13250436 (-)
G184049 NA non-coding upstream 338489 13318488 ~ 13318930 (-)
LOC120546199 NA non-coding upstream 359184 13339183 ~ 13398575 (-)
G184162 NA non-coding upstream 862273 13842272 ~ 13842477 (-)
ost4 NA other downstream 69916 12907302 ~ 12908747 (-)
G183650 NA other downstream 1604048 11374108 ~ 11374615 (-)
LOC120546776 NA other downstream 2368038 10455244 ~ 10610625 (-)
G183528 NA other downstream 2457253 10520717 ~ 10521410 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 2877602 10099478 ~ 10101061 (-)
hmgn3 hmgn3,LOC104958971 other upstream 165465 13145464 ~ 13215900 (-)
runx2b runx2,LOC102312376 other upstream 275886 13255885 ~ 13303784 (-)
fkbp1b fkbp1b other upstream 478603 13458602 ~ 13468065 (-)
mfsd2b mfsd2b other upstream 493684 13473683 ~ 13491143 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other upstream 1492202 14472201 ~ 14498370 (-)

Expression


Co-expression Network