akirin2 (LOC104936192,LOC106911218,LOC103359156,LOC103457369,LOC102236332,LOC103133163)


Basic Information

Item Value
gene id akirin2
gene name LOC104936192,LOC106911218,LOC103359156,LOC103457369,LOC102236332,LOC103133163
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 24413847 ~ 24417800 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782704.1
AATATTATAAACTAGTGAACCGTTGTGGGTGCTAGTACTCGGAACTAGTGCAGCAAAATCTGCAATCATCTGATTTTATAGAACATTTACCCTAGATTATTTTGGCCATATTATCTCAATATATATTCAGTAACGTGATCTACATGAGATTTATCAGCAGAAGGCAACGAGAGACGAAAATAGTGCGTATTAGTCTGCTGCCCGGAATTGCATCCGCCGTTTGacctagctaacattagctagcacTAGCAACACAGACGACAGGGCCCAGGTCAGCGACTTTCCCAAATAACAGGGAGTTTTAGCTTTTCCGTTTTAGGTTTTTTAGACAGATTTTAGCGTGATGGCTTGTGGGGCTACTCTTAAAAGGACTCTGGACTTTGATCCACTAATGAACCAGGCTTCACCTAAAAGAAGGAGGTGCGCCCCGATCATGTCTCCAGTCTCATCACCTCAGAAATATTTGCGTATGGAGCCCTCGCCGTTCGGGGAAGTGTCGTCCAGACTCACCACAGaGCAAATTCTACACAACATCAAACAGGAGTACAAGCGGCTGCAGAAACGACGACACCTGGATACCTTCCAGCAGGCAGACAGCTGCTGTCCTCTGGACCTGCAGAATGTTCACAGTGGATCTGCTGTACCAGGTACGTCCTCAGGTGCCTCATCTCCCACCAGAAAAGAGCAGCCTTTATTTTCCCTCAGACAAGTTGGGATGATTTGTGAAAGACTGCTGAAAGAGCGAGAGGACAAAATCCGTGAGGAGTACGATGAGATACTGACAACAAAGCTTGCCgAGCAATATGATGCGTTTGTCAAGTTCACGCATGATCAACTGATGCGAAGGTTTGGAGAGCAGCCTGCCAGCTATGTTTCCTGAGTGTCAGCGTCTGATATTGAGGAATACAATTTGCTACAAGCTACTCCAGGGACTTGTGGGTCTAGTTGGACTTTTCTCCTAGCTGTGTTATATCGCCTCTATGTGGACTCAGTTTGTGGCATCCACGTTTGCTGTGTCTGCCAGAGTTAGGACTTCCTGCTGCCAACTTGTTCAAGGACTCTCTGTGACTCTACCAGTGGCCTCTTAACTGCCGTGTCAATATTTATTTGGCTTTGTTCTGATGCCTTCGTAAAAGGCTGACTGCCACCACACACTTGGCCTTTTTGATTTTACTcagtttttttgtcaaatttagTTATTTCACAGAGAGGATGTTAATTGTGCAGCTTCTCTATATGTACATTTTTGGAAAAGGGATTGAACATTGAAGAGTTGGACGAACCAAGACCGCCTTTAGACTGGACCCCAGGAACAGGCATCTTGgcttttttcagcattgttttacTGGCAATTACATTTGTATacactgtatttttttatttttttgcttgacTTTTGTTCATTGTACCAAAATTTCATGATTCTATTTGCTGTAGGTATAAAGGGGCTTTTGATTCAAGAAAAGCAAACCAATAAAGTGTTTACACAAATGTTAA

Function

NR:

description
akirin-2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782704.1 True 1497 mRNA 0.43 5 24413847 24417800

Neighbor

gene id symbol gene type direction distance location
cnr1 cnr1,LOC104936193 coding upstream 1517 24408071 ~ 24412330 (+)
rngtt rngtt coding upstream 37703 24279420 ~ 24376144 (+)
LOC120546721 NA coding upstream 135358 24259548 ~ 24278489 (+)
si:dkey-174m14.3 LOC102302461,LOC103359114,LOC101468873,LOC102795766,LOC102194912 coding upstream 161167 24225057 ~ 24252680 (+)
nt5c1bb LOC104946496,LOC101163217,LOC103359106 coding upstream 197887 24207326 ~ 24215960 (+)
rars2 rars2 coding downstream 1460 24419260 ~ 24436323 (+)
LOC120546425 NA coding downstream 29108 24446908 ~ 24485599 (+)
LOC120546832 ppp1cb,LOC100692170,LOC103030509 coding downstream 80946 24498746 ~ 24506389 (+)
grcc10 clg15h12orf57,c7h12orf57,LOC102299093,LOC107105086,LOC105938778,LOC101473413,LOC102199733 coding downstream 97644 24515444 ~ 24518183 (+)
LOC120546974 LOC102776492,LOC103132202,LOC103457360,LOC107105132,LOC102297120,LOC103359253,LOC106962735,LOC108233450 coding downstream 112531 24530331 ~ 24630590 (+)
G187074 NA non-coding upstream 26679 24386956 ~ 24387168 (+)
G187027 NA non-coding upstream 179096 24211413 ~ 24234751 (+)
G186972 NA non-coding upstream 266629 24072763 ~ 24147218 (+)
G186961 NA non-coding upstream 488199 23868280 ~ 23925648 (+)
G186954 NA non-coding upstream 551913 23829525 ~ 23861934 (+)
G187158 NA non-coding downstream 218925 24636725 ~ 24639484 (+)
G187165 ptprk,LOC102777941 non-coding downstream 238170 24655970 ~ 24656643 (+)
LOC120546772 NA non-coding downstream 591713 25009513 ~ 25012350 (+)
G187212 NA non-coding downstream 693246 25111046 ~ 25143492 (+)
G187235 NA non-coding downstream 799353 25217153 ~ 25218783 (+)
extl3 extl3 other upstream 225983 24155487 ~ 24187864 (+)
LOC120547070 NA other upstream 267085 24144997 ~ 24146762 (+)
G186975 NA other upstream 330743 24079603 ~ 24083104 (+)
nfkbie nfkbie other upstream 824158 23578378 ~ 23589689 (+)
tcte1 NA other upstream 849418 23559498 ~ 23564429 (+)
G187094 bpnt1,LOC102799416 other downstream 89113 24506913 ~ 24507813 (+)
lama2 lama2,LOC104942190 other downstream 392279 24810079 ~ 25009457 (+)
trnat-ugu_3 NA other downstream 802068 25219868 ~ 25219940 (+)
abracl abracl,LOC103376263 other downstream 1511776 25929576 ~ 25935271 (+)
LOC120546493 NA other downstream 1537450 25955250 ~ 25968925 (+)

Expression


Co-expression Network