stmn4 (stmn4)


Basic Information

Item Value
gene id stmn4
gene name stmn4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 9603488 ~ 9622711 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782710.1
AATAAGACATCTCCAAGGTGATGTCATGGAGGCAGCAATGATGCTGTTGCCCGGCGCCTGTATCCTTGTAGCCAGACGGGGGTAATCGTAGTCACCGgtccatcagcagcagcagcagcagcagagaagaCGGAGACAGAGGGGGACAGACTGAGAAGGATCTTCAGCATCCCTGGGGAGTAACATACGCAGTGAGAAGATGACTCTGGCAGCCTACAAAGAGAAGGTGAAAGAGCTCCCCCTGGTGTCTCTGTTCTGTGCCTGCCTGAACCCGCAGACTGCAGACAAACCTACATACAAGGCAGAAGATGCGGTGGACCTGGGCTGGTGCGTTATCAAAGACGTGGAAGTCATTGAGCTGAACAAGCGGACATCTGGCCAGGCCTTCGAGGTCATCCTCAAGCCCCCGTCCTTCGACGGAGTGCCAGAGCTCAACACCTCCATGCCGCAGCGCCGCGACCCGTCCCTGGAGGAGATCCAGAAGAAGCTGGAGGCTGCCGAGGAGAGGCGAAAGTGCCAGGAGGCGGAGCTGCTGAAGCACCTGGCGGAGAAGAGAGAGCACGAGCGTGAAGTGATCCAGAAGGCCTTTGAGGAGAACAACAACTTCATCAAGAATGCCAAGGAGAAGCTTGAGCAAAAGATGGAGGCCAACAAGGAGAACAGGGAGGCCCTGCTGGCTGCCATGCTGGAGCGGCTCCAGGAGAAGGACAAACACGCTGAAGAAGTGAGGAAGAACAAGGAGATGAAGGAGGAAGCCTGTCGGTAGATGagtggagaagaagaagaaagagaatgaGCAGGACTGGGAGATTTTAGAGtcggttaaaaaaacaaaacagtgcaagaaagaaaaagaactcAAAAGCAACTCGAACAAAAGGAAAAGCCAAGTTTTCATAATTGATGTATGCTGTAACGATTATGAACAAGCTGTACAAAGTTTAGCCAACTCTTGATGTTGAAATTCAAAAAGaaatctgtctcttttttctaaAAGAAAGTGGGTGGGGGGATCGGGTGGcatcaaaacaaacatttcacatttttaatAGGGGGGCGGCATTGGTTGTTTGGTGAGAATGAAAGCTGCATCAAAGCAGGAGGAGGTAACAATTTAAATCATAGCTCCCATTCCTGCAGTTTTTTAAGTCAGAAAGCAGGAAAAGAATAGGACCAAGGATTGAACCCTGGGGTACACCACACGTCAGCTGAGCAGATTAACTTCAGCATCATTAACTAAGATATGTTTTTCTTAATGATGCCTTATATTAGAAATTGTAACTGAATGCTGCCTATTTGGCAGCAACACTACTAATTACAGGGTTTTTATCCAATTAGACTGTAACTATGAAGTAGGGAGTTGTAATCTAAATTGTTACCAAGTAAAAGATGAAAAATGTGTTATGTGCTTAAACAAAACTGGACACAGATGTAGTTTAGGAGCCCTAGTCAGTCACAACCAGTACAAGTCAGTCCCAGGCTTCTTCAGTCTTTGATTTACAGCATACTTACCAGTCAATATAAACAGAACATACTGTAACACTAACTTTTGCGGTTtccaaattaaaaataaaaattgatttCCCAAGGTCAACCGCTCTCGTGCGTATTCTTAGCATGCACCAtttttggaattgttgggtctgtCTGGGGACATCTGCGTGAGCTGAACTCAGTGAATCTCACAATATTGTTTATGAATATAAAAATGAAGAATCAGGCTCTTGTTTCTTTCTACAGTGCTCCaggggagtaaaaaaaaaaagaagaaaaaaaagcttgaaAAAGGAGGAAGCTCTGCTGtattttgccattttcaggctCTTTGTCTTTAAATGTAGTGTACGTAGTTGTAGATTAGTGACATGCATTTGAGTCTTAGATTTAGAGCACTGATTGCACTCTTTGTTTATTAAGCACAACTCAAAAGCACATATGCACACATGAAGGACAgttgatatatacagtatacacaacAATAACATCACAAGGAGGCAAAGTATTGAGTGACAGTAGTTCTAAACTTGGACAAATTTGTTTTTGAAAGGAAGAGTTTTGGGGGTTTCTGGCTAACCTTGCTTTGGCATGTGTCACTGTGCTCTGATGTCAGTCTATGATTTTCAAGGGAATGTAAACCTAAAAGAGTAAATGAAAAAGATGAAATTTGTTTGAGTTGTTGAGTCATACTGACTTGATTGAAATGTCTAAAATGTTTGCACTGTAAGCGGGGAGTCGTTACATGGGGTTTGTACTTGCTGTAACTGTGTGTCGCTGTCTATCTTCAAGGCTGGAGTGATTGTATCTATTTGGCATGGTCAGTAAAAACAGCTGAAAACTCA

Function

symbol description
stmn4 Predicted to enable tubulin binding activity. Acts upstream of or within regulation of cell cycle G2/M phase transition and regulation of neuron differentiation. Located in Golgi apparatus. Is expressed in midbrain neural keel; nervous system; and neural tube. Orthologous to human STMN4 (stathmin 4).

NR:

description
stathmin-4-like

GO:

id name namespace
GO:0031110 regulation of microtubule polymerization or depolymerization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782710.1 True 2339 mRNA 0.44 6 9603488 9622711

Neighbor

gene id symbol gene type direction distance location
paqr8 paqr8 coding downstream 46559 9550004 ~ 9556929 (-)
znf395b znf395 coding downstream 76060 9505432 ~ 9527428 (-)
si:ch211-63o20.7 LOC103362993,LOC101481409 coding downstream 132971 9460778 ~ 9470517 (-)
LOC120547212 NA coding downstream 200723 9330484 ~ 9402765 (-)
disp1 disp1 coding downstream 315285 9155024 ~ 9288203 (-)
LOC120546991 NA coding upstream 231029 9853740 ~ 9855384 (-)
LOC120547068 NA coding upstream 322154 9944865 ~ 9945741 (-)
LOC120547244 NA coding upstream 513289 10136000 ~ 10137776 (-)
cnstb LOC103373900 coding upstream 525364 10148075 ~ 10173978 (-)
kif26bb NA coding upstream 555598 10178309 ~ 10208325 (-)
G183263 NA non-coding downstream 60262 9532546 ~ 9543226 (-)
G183258 NA non-coding downstream 98116 9501912 ~ 9505372 (-)
G183256 NA non-coding downstream 110084 9493179 ~ 9493404 (-)
G183213 NA non-coding downstream 274965 9327400 ~ 9328523 (-)
G183214 NA non-coding downstream 276200 9325247 ~ 9327288 (-)
G183296 NA non-coding upstream 64011 9686722 ~ 9687119 (-)
G183298 emilin1,LOC103398511,LOC103372345 non-coding upstream 86342 9709053 ~ 9715339 (-)
G183299 LOC103398511 non-coding upstream 93879 9716590 ~ 9718205 (-)
G183317 snap25,snap25a,LOC107719097,LOC102796069,LOC107698362,LOC107599071 non-coding upstream 207165 9829876 ~ 9846858 (-)
LOC120546255 NA non-coding upstream 312476 9935187 ~ 9969773 (-)
G183176 NA other downstream 470016 9129573 ~ 9133472 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other downstream 578923 9020960 ~ 9024565 (-)
LOC120546397 NA other downstream 816270 8781328 ~ 8787218 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 1476824 8049458 ~ 8126664 (-)
G182977 NA other downstream 1578444 8024715 ~ 8025044 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 476767 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 832533 10455244 ~ 10610625 (-)
G183528 NA other upstream 898006 10520717 ~ 10521410 (-)
G183650 NA other upstream 1751397 11374108 ~ 11374615 (-)
ost4 NA other upstream 3284591 12907302 ~ 12908747 (-)

Expression


Co-expression Network