actr10 (actr10)


Basic Information

Item Value
gene id actr10
gene name actr10
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14584030 ~ 14592235 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782749.1
GTCATCGCGTTTCTGAAGACCCAACCCAATCCAACCGGAAGACAACAGTGTTTTTCATCCTTTTGATCGATACGATGCAAATTTGCGACTGTCAACGCTAATCACTGACATTCTTCATTCCAATAATAAAATGCCCTTATTTGATGGGTTGGGAAGTGGAGGAGAGAAGACTGCGATCGTTATTGACTTAGGAGCAGCATACACAAAATGCGGCTTTGCAGGGGAAACGGGGCCCAGGTTCATAATTCCGAGCGAGATCCGGAAACCGGGACAGCAGCAGGCCATCAAAGTGGTTCAGTACAACATCAATACAGAAGAGCTTTATGTCATCCTCAAAGAGTTTATCCATTTACTGTATTTCAGGCACCTGCTGGTGAATCCTCGCGACAGAAGGGTGGTCATCATAGAGTCCATCCTCTGCCCGTCTCACTTCAGGGAGACACTCACCAAGGTTTTCTTTAAACAGTTTGAGGTGCCCTCTGTGTTGTTTGCTCCAAGCCACCTCATGGCCATCATGACTTTGGGAATCAACTCGGCACTGGTGATGGACTGTGGCCACACAGAGACGCTGGTGCTACCTGTTTATGAGTGCACTCCTATTCTTCCAGCTTGGGAGGCTTTGCCTTTGGGAGGGAAAGCCATTCATAAAGAATTAGATGGACTTCTTGTGGAACAGTGCACTGTGGACACCGACACCACCACTGGGCAGAGTGTACCAGCTGCCATTGGGACCATCCCAGAGGAGACTGTGGAGGATATCAAGGTCAGAACATGCTTTGTCAGTGACCTGCAGAGAGGCCTCCAGATCCAGGAAGCCAAATTTAACCTGGACGGTGCAGCTGAACGTCCAGCCCCGCCTCCAGATGTTGATTACCCTCTGGATGGTGAGAAAATCTTGCACGTCAAAGGATCAATCAGgGACTCTGTGATGGAGATCCTGTTTGAACAGGACAATGAAGAGAAGAGTGTGGCCTCTCTGATACTTGATGCTCTGGTCAAGTGCCCCATTGACACACGTAAGGTGCTCTCGGAGAACCTGGTGGTGATCGGAGGCACGGCCATGCTGCCGGGTTTCCTGCACCGTCTGCTGGCCGAGCTACGCCTCCTCGTGGAGAAACCCAAGTACAGCAACGTGCTGGCCAGCAAGAGCTTGCGTTTACATGCTCCACCTGCCAAGCCCAACTGCACCGCCTGGCTCGGAGGTGCTATCTTCGGGGCGCTGCAGGACATCCTGGGCAGCAGGTCAGTGTCACGAGACTACTACAACCAGACAGGCCGCATCCCAGACTGGTGCTGCTTGAGCTCCCCTCCACCCGAGTCTCTCTACGAAGCAGGGAAGACGCCCCCCCCCCTCATGAAGAGAGCCTTCTCCACAGAGAAGTAGAGTGATCTGTAACATAATTCTAATGATGTACTCTCCTTTTCTCCACGTGATAGAACAGTTCAGTAATCTTAAACGCAACCTCTCAACTCAAGTCTTGTTAATGTGTTAACTACATCAAACAAACCGCTCTAGACGTTCTTAATGTCTAGTAGTCACACGCACGTTTTTGTATGCAGACGATTGTGGACTGTTTGATGATGGGGCGAGCTGGTTTCTGACCTCCCCAGTAAGAACAGATAGTGGGATTTTAGGCGTTTACATTGATATTCTACAAGTGTTAGAATTTCAAGTACTGTAGGTCCTGTGCTACATGCAGCCGTGTCTTCTGTTTCATTTTACGTCTCACTGAGGAAGACTGACCCTGTACGTGCTCAGTCTCACTTCACCTGTTTCTGCATTTTGTTGCCATTAAGACTGAAAAACACATTGTGTTCAGCAGAAATGTTTACCAAATTGTGCTTTAGTAATCCTTTTTCCAGCAAATGTGGCTCAACTTTGCTGACATTTTCCCAGTGTGATGTATGATAAAGTGTGGAGAACTGACTGCGTTTTTGACAGTAATGTCCCATGGAAGTCTTATTTATTGTTTGGATCTCGCAATGTAAAGTGGTTGTTGAACTCAATAAAGGCCCTGCACACTCACAAA

Function

symbol description
actr10 Acts upstream of or within central nervous system myelin formation and retrograde axonal transport of mitochondrion. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be part of dynactin complex. Is expressed in brain and posterior lateral line ganglion. Orthologous to human ACTR10 (actin related protein 10).

NR:

description
PREDICTED: actin-related protein 10

GO: NA

KEGG:

id description
K16576 ACTR10, ARP11; actin-related protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782749.1 True 2030 mRNA 0.49 13 14584030 14592235

Neighbor

gene id symbol gene type direction distance location
cipcb cipc,LOC101061969 coding downstream 17499 14561407 ~ 14566531 (-)
znf410 znf410,LOC102793462 coding downstream 23570 14548038 ~ 14560460 (-)
LOC120547074 samd15,LOC102792272,LOC106518567 coding downstream 54677 14525235 ~ 14529353 (-)
lrfn5b LOC104919828,LOC103359906,LOC102792771 coding downstream 59859 14509448 ~ 14524171 (-)
LOC120546407 NA coding downstream 195587 14387520 ~ 14388443 (-)
arf6a arf6.2,arf6,arf6a,LOC106518576,LOC104956700,LOC101063995,LOC106608083,LOC105893149 coding upstream 85305 14677540 ~ 14680093 (-)
fkbp3 fkbp3 coding upstream 111232 14703467 ~ 14706436 (-)
LOC120546409 mdga2 coding upstream 199878 14792113 ~ 14929662 (-)
wdr20b wdr20,LOC104961916,LOC103369949,LOC101068631,LOC101475300,LOC102799324,LOC101173269 coding upstream 529594 15121829 ~ 15128493 (-)
LOC120546952 LOC103369945,LOC104955612 coding upstream 607194 15199429 ~ 15201090 (-)
G184306 NA non-coding downstream 90462 14491099 ~ 14493568 (-)
G184295 NA non-coding downstream 145075 14432231 ~ 14438955 (-)
G184293 NA non-coding downstream 151858 14427804 ~ 14432172 (-)
G184292 NA non-coding downstream 159183 14423153 ~ 14424847 (-)
G184291 LOC103359912,LOC104959468 non-coding downstream 166782 14416872 ~ 14417248 (-)
G184346 NA non-coding upstream 63422 14655657 ~ 14656247 (-)
G184356 NA non-coding upstream 79659 14671894 ~ 14677060 (-)
G184360 NA non-coding upstream 97071 14689306 ~ 14689940 (-)
G184354 NA non-coding upstream 107449 14699684 ~ 14702181 (-)
G184381 NA non-coding upstream 449074 15041309 ~ 15041536 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other downstream 85660 14472201 ~ 14498370 (-)
mfsd2b mfsd2b other downstream 1092887 13473683 ~ 13491143 (-)
fkbp1b fkbp1b other downstream 1115965 13458602 ~ 13468065 (-)
runx2b runx2,LOC102312376 other downstream 1280246 13255885 ~ 13303784 (-)
hmgn3 hmgn3,LOC104958971 other downstream 1368130 13145464 ~ 13215900 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other upstream 64942 14657177 ~ 14667601 (-)
rps29 NA other upstream 518005 15110240 ~ 15111479 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other upstream 1196591 15788826 ~ 15795638 (-)
LOC120546224 NA other upstream 1473619 16065854 ~ 16068309 (-)
LOC120546332 akap7 other upstream 1554355 16146590 ~ 16188330 (-)

Expression


Co-expression Network