cnstb (LOC103373900)


Basic Information

Item Value
gene id cnstb
gene name LOC103373900
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 10148075 ~ 10173978 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782754.1
cgaggggaagctggaaaaaaaaagaaaaaagaagaagaaattccTCGGATTGGACCGTAAACAAGAAGCGTCCAGATGACAGAGTGAGGTTTATGTGGAGCCTGCTTGTGGGCCGAGACGGAGAAGGAAGGACCCACAGCACGACGCTGTTTCAGGGCGTTGATGTTCAGACGGCAAAGTGtgagacatcatcatcatcatccagcGctCGCTGGGGAAAAGGAAAGGAGGCTGCACTGAATTCTGTGTctaagagaggagaggaaaagcacAATAAACCATACAGAGGACTGCGGAAAGTCTGCCAAATCTGAGAGCATCATCCTCCACTGCTCAGCCTTCATAGATTATGGTGGACATTTCAAATCTCCCTTTCCACGACCACCCAGGAGAAGCGGTGGAGGATTAAATCACATGCTCCGTCACGAGTGATAACAAACCAAACCTGCCGAAGCCTCATTCTCCAGTGCTCGAGACACCCTTGAATCCTTTCTGGGAGCTTAGAGCAACATAGACGTTCCTCAGTCATTTCCTTATCTCGCTCATAGGAAGTGCACAGATAAAAGTCAGAAACAGTTCATGTTTTTCAAGTgagggcagaaaaaaaaaaagccagccaCGGCCCACTGGAGGGTCTCAGAAAAGCTTTCGGGGAACGTCGACTTGGAAGACAAGATTGCTGCAGTGGCGGAGGTGATGGGTAACAAGAACGCCACCCCGCCAAAAGATCCCGACACTGGGACAAcgcagaaagaggaaggggtgTTCATCGACAGTGCCACAGGAAGCGTCTCCAGAGATGAACGGCCGGGCCCCAGCCCAGAGCTGCTGGCCTCCCTGCAGTCCCTCAGAGAAAACAGTGACTACACACTGCTGCCACACTCCCTGCaccagatcgCAGAGGCCTACTCGCTCAAAGAGGACTACCAGTGGGCCATCCAGTTCCTCCAGCTGGAGAAACTCTACCACCAACGTCTGCTCTCCAACCTCGCCGCCCTGCAGGATAACTGGGAGAGCCAgtggaaagagaagaagaacgACGAAAGCAGTTTGCCCGCTGAGACGGACGGCATCAGTCAGAAACACATCGAGACCCTGAGCCAGATCTGCAGGACACACCTCAGACCATCCGTCAATGTGGAACAGAACACGCAGAATGCAACGCTGACCGACGCTCCGAGCACGAATGAGACACTACAAGCCTGTCCTGACAAAGTCAACAAGCCTGAAACAACACAGCGAGATGAGGAACAAGAGCAAAGCATGATCTCGGAGTCAGAGCTTCCCTTAGCACAGACAGGCCCTCAGGAGGaacgggaggaggaggaggaggaggaaacagaagaagaacaaaCGTATGAGGAAGGACAGGAagtagaagaggaggaggaggaggaggagccgtGTGAGGAGACGCcggaggaggaggtgaaggtGGAGTGGCCAACAGGAGTCCCCCAGGCTTCAGACAAGGAGCTGGCCAAGCTGTCCCACACAGAGGGGAGTTCCTCCCCAGAGGGTCTGGTCTCCATTCTGAAGAGGAGGAGAGCGTCGCTGGACGGATTGCCTCCCCCAAGCGACATTGTTACTAAACAGAACTCCAAACGCAAAGTCCGCTTCAGTGAGCCAGAGGACGGCGTTGAACAAGATGAGGTAGGTGGAGACTCCTGTCTgatcctgctgctgctgtgtctgGTTACCGTGGTGATCAGCATAGGCGGGACCGCCCTCTACTGCACTCTGGTGGACACGTACTCCAACATTTGCACCGACTTCACTCACAACGTCGACTTCTACGTCGTGAGCGTACGGAGGTTCTTTGAAGGGCTCGGACACTGGCTGCCCCTCCGGACTTAAGACGCTTTCAGCTGCAATCTAGACACTCGTTCTGTAACGGGCAGAGTAAAATAGAGAGATCCTGAGCACGACTCCAATCTACAGTTTGGCGTCAACGTGACAGGCACGGGATGCACATGCATTAATCTGATGCTGCCATCCAGTGTTTAAAAGCTTTGATTTCACCTACGGCGACTGGGCTTGTGTCTAAGGCGTTATGAATTGGAGCTATCAGCCTTAGGTTCCTGTATGGAACTGACGGGTGCTCAAAGCAACAtcgaaacagaaaaaaactgtcACAAGTATGTATGTTGTGGGATCCGAGTTTAAAAACCTCCCGTTTGCTACTGTTTTGTGTGGATGCTTCATCTTAAGCTGAACCGTACAGATACCACACAAGAGGGCTCACAACTCTTTacaatatttatgtttaacaggAGAAGTTTATGTGCGTAGAAGTGTTTCCCTTACATTTGTAGCTGTCGTAGCTGTGTACACTTTTGTCTTTAGTTCCAGAAGCTTTTATATTTTGACTTATACAAGAAGTCTTcgagtgctcatattatgctttttggcttttcccctttcctttattgtgttatatatcttgtttgtgcacgttataggtttacaaag
>XM_039782755.1
CACGCGCACGTGCAGACGCACCGACACTCGGCCACCCACTTTTTGCGACAATTTGTTTTCACGAACAGACGGAATGAATTGAAACCATTGAAACGGTCAACTGTAGAAACAATGGCAGAgacaaaaagcaccaaaaagCTGGTGTATTACACTGCTGCTCACCGTGTTCAAGGACTGAATctCGCTGGGGAAAAGGAAAGGAGGCTGCACTGAATTCTGTGTctaagagaggagaggaaaagcacAATAAACCATACAGAGGACTGCGGAAAGTCTGCCAAATCTGAGAGCATCATCCTCCACTGCTCAGCCTTCATAGATTATGGTGGACATTTCAAATCTCCCTTTCCACGACCACCCAGGAGAAGCGGTGGAGGATTAAATCACATGCTCCGTCACGAGTGATAACAAACCAAACCTGCCGAAGCCTCATTCTCCAGTGCTCGAGACACCCTTGAATCCTTTCTGGGAGCTTAGAGCAACATAGACGTTCCTCAGTCATTTCCTTATCTCGCTCATAGGAAGTGCACAGATAAAAGTCAGAAACAGTTCATGTTTTTCAAGTgagggcagaaaaaaaaaaagccagccaCGGCCCACTGGAGGGTCTCAGAAAAGCTTTCGGGGAACGTCGACTTGGAAGACAAGATTGCTGCAGTGGCGGAGGTGATGGGTAACAAGAACGCCACCCCGCCAAAAGATCCCGACACTGGGACAAcgcagaaagaggaaggggtgTTCATCGACAGTGCCACAGGAAGCGTCTCCAGAGATGAACGGCCGGGCCCCAGCCCAGAGCTGCTGGCCTCCCTGCAGTCCCTCAGAGAAAACAGTGACTACACACTGCTGCCACACTCCCTGCaccagatcgCAGAGGCCTACTCGCTCAAAGAGGACTACCAGTGGGCCATCCAGTTCCTCCAGCTGGAGAAACTCTACCACCAACGTCTGCTCTCCAACCTCGCCGCCCTGCAGGATAACTGGGAGAGCCAgtggaaagagaagaagaacgACGAAAGCAGTTTGCCCGCTGAGACGGACGGCATCAGTCAGAAACACATCGAGACCCTGAGCCAGATCTGCAGGACACACCTCAGACCATCCGTCAATGTGGAACAGAACACGCAGAATGCAACGCTGACCGACGCTCCGAGCACGAATGAGACACTACAAGCCTGTCCTGACAAAGTCAACAAGCCTGAAACAACACAGCGAGATGAGGAACAAGAGCAAAGCATGATCTCGGAGTCAGAGCTTCCCTTAGCACAGACAGGCCCTCAGGAGGaacgggaggaggaggaggaggaggaaacagaagaagaacaaaCGTATGAGGAAGGACAGGAagtagaagaggaggaggaggaggaggagccgtGTGAGGAGACGCcggaggaggaggtgaaggtGGAGTGGCCAACAGGAGTCCCCCAGGCTTCAGACAAGGAGCTGGCCAAGCTGTCCCACACAGAGGGGAGTTCCTCCCCAGAGGGTCTGGTCTCCATTCTGAAGAGGAGGAGAGCGTCGCTGGACGGATTGCCTCCCCCAAGCGACATTGTTACTAAACAGAACTCCAAACGCAAAGTCCGCTTCAGTGAGCCAGAGGACGGCGTTGAACAAGATGAGGTAGGTGGAGACTCCTGTCTgatcctgctgctgctgtgtctgGTTACCGTGGTGATCAGCATAGGCGGGACCGCCCTCTACTGCACTCTGGTGGACACGTACTCCAACATTTGCACCGACTTCACTCACAACGTCGACTTCTACGTCGTGAGCGTACGGAGGTTCTTTGAAGGGCTCGGACACTGGCTGCCCCTCCGGACTTAAGACGCTTTCAGCTGCAATCTAGACACTCGTTCTGTAACGGGCAGAGTAAAATAGAGAGATCCTGAGCACGACTCCAATCTACAGTTTGGCGTCAACGTGACAGGCACGGGATGCACATGCATTAATCTGATGCTGCCATCCAGTGTTTAAAAGCTTTGATTTCACCTACGGCGACTGGGCTTGTGTCTAAGGCGTTATGAATTGGAGCTATCAGCCTTAGGTTCCTGTATGGAACTGACGGGTGCTCAAAGCAACAtcgaaacagaaaaaaactgtcACAAGTATGTATGTTGTGGGATCCGAGTTTAAAAACCTCCCGTTTGCTACTGTTTTGTGTGGATGCTTCATCTTAAGCTGAACCGTACAGATACCACACAAGAGGGCTCACAACTCTTTacaatatttatgtttaacaggAGAAGTTTATGTGCGTAGAAGTGTTTCCCTTACATTTGTAGCTGTCGTAGCTGTGTACACTTTTGTCTTTAGTTCCAGAAGCTTTTATATTTTGACTTATACAAGAAGTCTTcgagtgctcatattatgctttttggcttttcccctttcctttattgtgttatatatcttgtttgtgcacgttataggtttacaaag

Function

NR:

description
PREDICTED: consortin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782754.1 True 2472 mRNA 0.51 11 10148075 10173978
XM_039782755.1 False 2445 mRNA 0.51 11 10148075 10173322

Neighbor

gene id symbol gene type direction distance location
LOC120547244 NA coding downstream 10299 10136000 ~ 10137776 (-)
LOC120547068 NA coding downstream 202334 9944865 ~ 9945741 (-)
LOC120546991 NA coding downstream 292691 9853740 ~ 9855384 (-)
stmn4 stmn4 coding downstream 525364 9603488 ~ 9622711 (-)
paqr8 paqr8 coding downstream 591146 9550004 ~ 9556929 (-)
kif26bb NA coding upstream 4331 10178309 ~ 10208325 (-)
lft1 LOC104927083,LOC104968260,LOC100695903,LOC101475792,LOC102299013 coding upstream 52838 10226816 ~ 10229005 (-)
fzd3a fzd3 coding upstream 173022 10347000 ~ 10379127 (-)
fam49a fam49a coding upstream 224824 10398802 ~ 10449410 (-)
sf3b6 sf3b6,pm14,SF3B6 coding upstream 488139 10662117 ~ 10666300 (-)
LOC120547073 NA non-coding downstream 81789 10064593 ~ 10066286 (-)
G183383 NA non-coding downstream 99843 10047957 ~ 10048232 (-)
G183382 NA non-coding downstream 102580 10045181 ~ 10045495 (-)
LOC120546255 NA non-coding downstream 178302 9935187 ~ 9969773 (-)
G183317 snap25,snap25a,LOC107719097,LOC102796069,LOC107698362,LOC107599071 non-coding downstream 301217 9829876 ~ 9846858 (-)
G183458 NA non-coding upstream 758 10174736 ~ 10175355 (-)
G183457 NA non-coding upstream 2922 10176900 ~ 10177569 (-)
G183492 hnrnpu non-coding upstream 42373 10216351 ~ 10217126 (-)
G183497 NA non-coding upstream 46940 10220918 ~ 10233568 (-)
G183530 NA non-coding upstream 383509 10557487 ~ 10558119 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 47014 10099478 ~ 10101061 (-)
G183176 NA other downstream 1014603 9129573 ~ 9133472 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other downstream 1123510 9020960 ~ 9024565 (-)
LOC120546397 NA other downstream 1360857 8781328 ~ 8787218 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 2021411 8049458 ~ 8126664 (-)
LOC120546776 NA other upstream 281266 10455244 ~ 10610625 (-)
G183528 NA other upstream 346739 10520717 ~ 10521410 (-)
G183650 NA other upstream 1200130 11374108 ~ 11374615 (-)
ost4 NA other upstream 2733324 12907302 ~ 12908747 (-)
LOC120547209 NA other upstream 2786520 12960498 ~ 13007868 (-)

Expression


Co-expression Network