zc3h14 (zc3h14)


Basic Information

Item Value
gene id zc3h14
gene name zc3h14
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18402072 ~ 18409077 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782803.1
TTAGCCACGTGATCATACGTCACTAACATTTGTCTCTGTTCGTTAGCAGTGAAGCTGAAAACAGTCGcttcttttttaaacttatttaCTTGAAAAAACGAGAAGCATGGAGATTGGGACAGAGATAAGCAAGAAAATAAGAGCTGCTATCAAAGGCAAGCTTCAGGAGCTCGGTGCATATATTGATGAAGAGCTTCCCGACTATATTATGGTGATGGTAGCAAACAAGAAAACCTCCCAACAGATGGCTGACGATCTCTCCCTTTTCCTTGGAAACAACACTAGCAAATTCACAGCATGGCTACAGGGTGTACTTGAGAAGTTAAGAACTGTTGCAGTCGAGCCTGCATCCCTCAGTGGACATCAGCTCCAGTCTGACAGTGGTACTTTTGCTGGGAAGAGCCGCTCATCTCTAAGTGAGGACAGCAGAGCAGAGGAGTTGAAGGTGCTGACAGTGTCCAGCTCACGCTCTGATAGGACTGAAGCACGCGTCTCCAGTTCCGCTCATGAAAGCAGGAGAGGCAGCTTGGAGAAGAGTTCCTCTCGACTTACCTCCACCGTTAAGCCCCTCATGGAGCCACTCCCCTTAGAGGCCGTTATTGACATCAAACCAGAGATGGACGATGACTTCATCGCTGAGGATCCTGTAGAAATAGGCACCAACCATGGTCGAACACGTGCAGCTAGTAGACCCACAGCTGAAATCTACAGACCGGGTCAGAGCAAGTTTACATTAGCAAGCTCTGCAGACGTGTGTCGACCCTCCGAAGGATCCTCTCACTCAAGGCAGCAggacagcagaagcagcagaacCTCCAGAACCGGATCCAGTAAGCAGGAGGAACTGTCCCGGAAGCGTAAGGCGCCGGTGGCAAGTTCAGTGGTGCGAGTGAACCGAGCAGCAGACGAGGACAGCGATGATATGGAAGAGGAAGACGCAGGCTATGGAGGCAGAGGCCTGTCCAGTAGAGTGTCCCTACCCTCCAAACCAGAACGCAAGCCTACTCTCCCTCCAGCCAAGCAAGCCAACAGAAATCTGATACTGAAGGCCATCTCCGAGGCCCAGGACTCAATCACCAAAACTACAGCCTACCCCACAATACCACAGAGGCAGACTGTTCCTGTGGCACCTCGTACTCGTGTGGCCAGCAGTGAAGAGATGACTGCAGCCATCCAGCTGGTCCAGGAGCATCTCCACAGCCTGGCCCCCAGGGTTCAGGCCTACACCTCTGCAGAGCTCCCTCCTTCCAGAACACCTGCCCCAGCGAGATCTTTAGCTTCACGCCTCCAGTTGGACTTAGCAGAGAACAGTGAAAGAGGAGAGCAGAGGGACTATGGTGTAGAGGTCACTGCAGGCAGTGAGGCAAAGCCATTTGATACCCGCTCCTTCATAGTGAGTCCACCGCAGCTGGGAGAATCTACAGCCAGAAGCCAGCAGCGTCCTCAGGCCAAAGGGGGAGTCCAGTCTGCTTTACCACGCACTGTCCAGgctagTAAGGAGAAGGGCGACTCTGTTAGTCCCAAGTTCATAGTGACATTAGATGGGGTGCCGAGCCCGCTGGGAAATCTTGCCGACTGTGAAATGGAGCTGGAGGATGTGAGACCGCCCACAAGGGTCACCGAGGCGACCGTCCACGCCAACAGGGAGCCCAAAGTCAGCATCCTTCACAGACTACAGGGAAGACTCACATTACCAGAAGATGATGTGATGGATGTTGAGATGGCGGAAGAGGATGCCGGCCCTTTAAAGAAACAGAAGGTGATGGAGCGCTGCAAGTTCTGGCCGGTCTGTAAAAGTGGAGATGATTGTATGTACCATCACCCTACAACACAGTGCAAGACTTTTCCCACTTGCAAGTTTGGGGATAAATGCCTTTTCGTGCATCCAAATTGTAAATACGATGCCAGGTGCACCAAGCCAGACTGTCCCTTCACTCATGTCAGCCGAAGAAGCACAGCTGCTCCTCCGCCCAGGCCAGCAGTGCAGCCAGTCCAAACCACTAGTGTGTGCCGCTTCTTTCCAGAGTGCAAGAAGATGGACTGTGCGTTTTATCATCCCAAGCCCTGTCGCTTCGCGGCACAGTGTAAACGAGCTGGGTGTACCTTCTACCACCCGACCACATCTGTGCCTCCGAGACACGCCCTGAAGTGGACAAAAACACAGACCAGCTCATAAAGTCCAGGAACAGGAGTCTGCTGATGGTTAACGTGAAACTATGGAAGATGTTCTGTATCTGTCGACAGATTTTCATTCTTCTTTTCAGTATTTAACTgttgtttcatttcattttaatgtatTGTTTGGACTGATTTTTAAGAGTTTTGTatggaaacaaaaaaaggtttcGCTCATGCTCTCTGAATATTAAAATGCTCCACAATGAACTTTAAA
>XM_039782804.1
TTTAGCCACGTGATCATACGTCACTAACATTTGTCTCTGTTCGTTAGCAGTGAAGCTGAAAACAGTCGcttcttttttaaacttatttaCTTGAAAAAACGAGAAGCATGGAGATTGGGACAGAGATAAGCAAGAAAATAAGAGCTGCTATCAAAGGCAAGCTTCAGGAGCTCGGTGCATATATTGATGAAGAGCTTCCCGACTATATTATGGTGATGGTAGCAAACAAGAAAACCTCCCAACAGATGGCTGACGATCTCTCCCTTTTCCTTGGAAACAACACTAGCAAATTCACAGCATGGCTACAGGGTGTACTTGAGAAGTTAAGAACTGTTGCAGTCGAGCCTGCATCCCTCAGTGGACATCAGCTCCAGTCTGACAGTGGTACTTTTGCTGGGAAGAGCCGCTCATCTCTAAGTGAGGACAGCAGAGCAGAGGAGTTGAAGGTGCTGACAGTGTCCAGCTCACGCTCTGATAGGACTGAAGCACGCGTCTCCAGTTCCGCTCATGAAAGCAGGAGAGGCAGCTTGGAGAAGAGTTCCTCTCGACTTACCTCCACCGTTAAGCCCCTCATGGAGCCACTCCCCTTAGAGGCCGTTATTGACATCAAACCAGAGATGGACGATGACTTCATCGCTGAGGATCCTGTAGAAATAGGCACCAACCATGGTCGAACACGTGCAGCTAGTAGACCCACAGCTGAAATCTACAGACCGGGTCAGAGCAAGTTTACATTAGCAAGCTCTGCAGACGTGTGTCGACCCTCCGAAGGATCCTCTCACTCAAGGCAGCAggacagcagaagcagcagaacCTCCAGAACCGGATCCAGTAAGGAGGAACTGTCCCGGAAGCGTAAGGCGCCGGTGGCAAGTTCAGTGGTGCGAGTGAACCGAGCAGCAGACGAGGACAGCGATGATATGGAAGAGGAAGACGCAGGCTATGGAGGCAGAGGCCTGTCCAGTAGAGTGTCCCTACCCTCCAAACCAGAACGCAAGCCTACTCTCCCTCCAGCCAAGCAAGCCAACAGAAATCTGATACTGAAGGCCATCTCCGAGGCCCAGGACTCAATCACCAAAACTACAGCCTACCCCACAATACCACAGAGGCAGACTGTTCCTGTGGCACCTCGTACTCGTGTGGCCAGCAGTGAAGAGATGACTGCAGCCATCCAGCTGGTCCAGGAGCATCTCCACAGCCTGGCCCCCAGGGTTCAGGCCTACACCTCTGCAGAGCTCCCTCCTTCCAGAACACCTGCCCCAGCGAGATCTTTAGCTTCACGCCTCCAGTTGGACTTAGCAGAGAACAGTGAAAGAGGAGAGCAGAGGGACTATGGTGTAGAGGTCACTGCAGGCAGTGAGGCAAAGCCATTTGATACCCGCTCCTTCATAGTGAGTCCACCGCAGCTGGGAGAATCTACAGCCAGAAGCCAGCAGCGTCCTCAGGCCAAAGGGGGAGTCCAGTCTGCTTTACCACGCACTGTCCAGgctagTAAGGAGAAGGGCGACTCTGTTAGTCCCAAGTTCATAGTGACATTAGATGGGGTGCCGAGCCCGCTGGGAAATCTTGCCGACTGTGAAATGGAGCTGGAGGATGTGAGACCGCCCACAAGGGTCACCGAGGCGACCGTCCACGCCAACAGGGAGCCCAAAGTCAGCATCCTTCACAGACTACAGGGAAGACTCACATTACCAGAAGATGATGTGATGGATGTTGAGATGGCGGAAGAGGATGCCGGCCCTTTAAAGAAACAGAAGGTGATGGAGCGCTGCAAGTTCTGGCCGGTCTGTAAAAGTGGAGATGATTGTATGTACCATCACCCTACAACACAGTGCAAGACTTTTCCCACTTGCAAGTTTGGGGATAAATGCCTTTTCGTGCATCCAAATTGTAAATACGATGCCAGGTGCACCAAGCCAGACTGTCCCTTCACTCATGTCAGCCGAAGAAGCACAGCTGCTCCTCCGCCCAGGCCAGCAGTGCAGCCAGTCCAAACCACTAGTGTGTGCCGCTTCTTTCCAGAGTGCAAGAAGATGGACTGTGCGTTTTATCATCCCAAGCCCTGTCGCTTCGCGGCACAGTGTAAACGAGCTGGGTGTACCTTCTACCACCCGACCACATCTGTGCCTCCGAGACACGCCCTGAAGTGGACAAAAACACAGACCAGCTCATAAAGTCCAGGAACAGGAGTCTGCTGATGGTTAACGTGAAACTATGGAAGATGTTCTGTATCTGTCGACAGATTTTCATTCTTCTTTTCAGTATTTAACTgttgtttcatttcattttaatgtatTGTTTGGACTGATTTTTAAGAGTTTTGTatggaaacaaaaaaaggtttcGCTCATGCTCTCTGAATATTAAAATGCTCCACAATGAACTTTAAA
>XM_039782805.1
CTTTAGCCACGTGATCATACGTCACTAACATTTGTCTCTGTTCGTTAGCAGTGAAGCTGAAAACAGTCGcttcttttttaaacttatttaCTTGAAAAAACGAGAAGCATGGAGATTGGGACAGAGATAAGCAAGAAAATAAGAGCTGCTATCAAAGGCAAGCTTCAGGAGCTCGGTGCATATATTGATGAAGAGCTTCCCGACTATATTATGGTGATGGTAGCAAACAAGAAAACCTCCCAACAGATGGCTGACGATCTCTCCCTTTTCCTTGGAAACAACACTAGCAAATTCACAGCATGGCTACAGGGTGTACTTGAGAAGTTAAGAACTGTTGCAGTCGAGCCTGCATCCCTCAGTGGACATCAGCTCCAGTCTGACAGTGGTACTTTTGCTGGGAAGAGCCGCTCATCTCTAAGTGAGGACAGCAGAGCAGAGGAGTTGAAGGTGCTGACAGTGTCCAGCTCACGCTCTGATAGGACTGAAGCACGCGTCTCCAGTTCCGCTCATGAAAGCAGGAGAGGCAGCTTGGAGAAGAGTTCCTCTCGACTTACCTCCACCGTTAAGCCCCTCATGGAGCCACTCCCCTTAGAGGCCGTTATTGACATCAAACCAGAGATGGACGATGACTTCATCGCTGAGGATCCTGTAGAAATAGGCACCAACCATGGTCGAACACGTGCAGCTAGTAGACCCACAGCTGAAATCTACAGACCGGGTCAGAGCAAGTTTACATTAGCAAGCTCTGCAGACGTGTGTCGACCCTCCGAAGGATCCTCTCACTCAAGGCAGCAggacagcagaagcagcagaacCTCCAGAACCGGATCCAGTAAGCAGGAGGAACTGTCCCGGAAGCGTAAGGCGCCGGTGGCAAGTTCAGTGGTGCGAGTGAACCGAGCAGCAGACGAGGACAGCGATGATATGGAAGAGGAAGACGCAGGCTATGGAGGCAGAGGCCTGTCCAGTAGAGTGTCCCTACCCTCCAAACCAGAACGCAAGCCTACTCTCCCTCCAGCCAAGCAAGCCAACAGAAATCTGATACTGAAGGCCATCTCCGAGGCCCAGGACTCAATCACCAAAACTACAGCCTACCCCACAATACCACAGAGGCAGACTGTTCCTGTGGCACCTCGTACTCGTGTGGCCAGCAGTGAAGAGATGACTGCAGCCATCCAGCTGGTCCAGGAGCATCTCCACAGCCTGGCCCCCAGGGTTCAGGCCTACACCTCTGCAGAGCTCCCTCCTTCCAGAACACCTGCCCCAGCGAGATCTTTAGCTTCACGCCTCCAGTTGGACTTAGCAGAGAACAGTGAAAGAGGAGAGCAGAGGGACTATGGTGTAGAGGTCACTGCAGGCAGTGAGGCAAAGCCATTTGATACCCGCTCCTTCATAGTGAGTCCACCGCAGCTGGGAGAATCTACAGCCAGAAGCCAGCAGCGTCCTCAGGCCAAAGGGGGAGTCCAGTCTGCTTTACCACGCACTGTCCAGgctagTAAGGAGAAGGGCGACTCTGTTAGTCCCAAGTTCATAGTGACATTAGATGGGGTGCCGAGCCCGCTGGGAAATCTTGCCGACTGTGAAATGGAGCTGGAGGATGTGAGACCGCCCACAAGGGTCACCGAGGCGACCGTCCACGCCAACAGGGAGCCCAAAGTCAGCATCCTTCACAGACTACAGGGAAGACTCACATTACCAGAAGATGATGTGATGGATGTTGAGATGGCGGAAGAGGATGCCGGCCCTTTAAAGAAACAGAAGGTGATGGAGCGCTGCAAGTTCTGGCCGGTCTGTAAAAGTGGAGATGATTGTATGTACCATCACCCTACAACACAGTGCAAGACTTTTCCCACTTGCAAGTTTGGGGATAAATGCCTTTTCGTGCATCCAAATTGTAAATACGATGCCAGGTGCACCAAGCCAGACTGTCCCTTCACTCATGTCAGCCGAAGAAGCACAGCTGCTCCTCCGCCCAGGCCAGTGCAGCCAGTCCAAACCACTAGTGTGTGCCGCTTCTTTCCAGAGTGCAAGAAGATGGACTGTGCGTTTTATCATCCCAAGCCCTGTCGCTTCGCGGCACAGTGTAAACGAGCTGGGTGTACCTTCTACCACCCGACCACATCTGTGCCTCCGAGACACGCCCTGAAGTGGACAAAAACACAGACCAGCTCATAAAGTCCAGGAACAGGAGTCTGCTGATGGTTAACGTGAAACTATGGAAGATGTTCTGTATCTGTCGACAGATTTTCATTCTTCTTTTCAGTATTTAACTgttgtttcatttcattttaatgtatTGTTTGGACTGATTTTTAAGAGTTTTGTatggaaacaaaaaaaggtttcGCTCATGCTCTCTGAATATTAAAATGCTCCACAATGAACTTTAAA

Function

symbol description
zc3h14 Predicted to enable poly(A) binding activity. Predicted to be involved in negative regulation of mRNA polyadenylation and regulation of mRNA stability. Predicted to be located in nuclear speck. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human ZC3H14 (zinc finger CCCH-type containing 14).

NR:

description
PREDICTED: zinc finger CCCH domain-containing protein 14 isoform X1

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K23038 ZC3H14; zinc finger CCCH domain-containing protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782803.1 True 2392 mRNA 0.51 17 18402074 18409077
XM_039782804.1 False 2390 mRNA 0.51 17 18402073 18409077
XM_039782805.1 False 2391 mRNA 0.51 17 18402072 18409077

Neighbor

gene id symbol gene type direction distance location
LOC120547097 LOC104922430,LOC103363566,LOC104964450 coding upstream 43159 18347236 ~ 18358913 (+)
chrna2b LOC104964447,LOC101470861 coding upstream 108237 18283900 ~ 18293835 (+)
si:ch211-142k18.1 LOC104964445 coding upstream 119370 18273829 ~ 18282702 (+)
nme6 nme6 coding upstream 203569 18194483 ~ 18198503 (+)
atraid atraid coding upstream 224968 18173169 ~ 18177104 (+)
batf batf coding downstream 4935 18414012 ~ 18419160 (+)
flvcr2b LOC104964435,LOC107377514,LOC101468256,LOC103363569,LOC108242486,LOC100710273 coding downstream 10579 18419656 ~ 18442262 (+)
LOC120546828 LOC103363571,LOC107377519,LOC101067486,LOC106919680 coding downstream 91914 18500991 ~ 18581123 (+)
LOC120547135 LOC104964429,LOC103372634 coding downstream 239224 18648301 ~ 18654514 (+)
fosab LOC104951064,LOC103372631,LOC100709203 coding downstream 286578 18695655 ~ 18698104 (+)
G185374 NA non-coding upstream 4901 18396866 ~ 18397171 (+)
G185361 NA non-coding upstream 87593 18314228 ~ 18314479 (+)
G185360 NA non-coding upstream 93337 18308335 ~ 18308735 (+)
G185359 NA non-coding upstream 96495 18305254 ~ 18305577 (+)
G185357 NA non-coding upstream 99107 18302698 ~ 18302965 (+)
LOC120546827 NA non-coding downstream 34875 18443952 ~ 18464028 (+)
G185414 NA non-coding downstream 227297 18636374 ~ 18640381 (+)
G185415 LOC106525279 non-coding downstream 234342 18643419 ~ 18645154 (+)
LOC120546607 NA non-coding downstream 257563 18666640 ~ 18690033 (+)
G185471 NA non-coding downstream 294888 18703965 ~ 18705234 (+)
znf513a znf513,LOC102795572 other upstream 261812 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 347146 18020956 ~ 18054926 (+)
G185237 NA other upstream 484824 17916853 ~ 17917248 (+)
LOC120546940 NA other upstream 708438 17674393 ~ 17693634 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other upstream 715674 17669172 ~ 17686398 (+)
ylpm1 ylpm1 other downstream 189288 18598365 ~ 18635052 (+)
LOC120547227 LOC104932566,LOC103364615 other downstream 296779 18705856 ~ 18711994 (+)
LOC120546624 prox1 other downstream 795077 19204154 ~ 19237033 (+)
acbd3 acbd3,LOC102799892 other downstream 945539 19354616 ~ 19427489 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other downstream 958643 19367720 ~ 19389223 (+)

Expression


Co-expression Network