LOC120547277


Basic Information

Item Value
gene id LOC120547277
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 5247945 ~ 5253700 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782808.1
CTCCTTACAATCACAAGCCTTGGTAGGTAGTCAGTACACTCAACAGGTTGCAGGTGTCGGCTGTGTCCATGCACTGTTTGACTACAACATTCTGAGGAGAGAGCATAAAAATAACTGAAGAAATTTAAGTCAACTGGCCCGTGGAAGATGCACTGCCAACAAAAGGACATTGTTGAAGGATCCTAGAAGACCGCATCTAACCGAATACACACATCCTTACCAATGGATATACACTTTGGCTTTCACTTTTTCTCCTGACAAATTTTTCTTCAGAGAAAGAGATTTTTTAAGGTTTTCTTGAGTCACCTTTGAATGCAATAATGGGCTGCTCTCCATCCAAAGGAAAGTTATTTTCAAAGCCAGAAGCTCCTGGACCTCAAAAGGCTCCACAGGCTGAGGCACCACAAGATAGTGTTGATTCTAAACCTGAAGAGGAGAAGAGCAAATGTTTCGAGACCGACGAGAAAGAAAATGAACTTCCTCTACCCGATGAAGAAGAACATCCTACGAAAGAGACTATGTGGTCTCAACTGGCCCCTGATACAGATGCCCAAAACACAGACGACGTTAAAGAAACAGAGGTAAATGTGATGCCCCAAGAAAACGTCGAAGAGGTTATACAAACAGATAAGATTAAAAAgatggagaaaagaaagaaaaacaaaggcaAGGGAAGGTCCaacaaaaagcaaagaaaagccTCTATTTTACAGACAAAGGTAGACTTCCCACCACACATGGTGAGGGCTCACCACGCAGCCTATGCTTTTTTGAACCCGAACATCTCCAAATATGAGACCCTGTTGGGCCTGCTGGACCAGGCCGCCCAGACACAGCTGTCCCTCCAGCCCACAATGTCTGCTTTGGTGTTTCGCTTCGAGGAAATCAACCAGGCCCTAGAGGAGATGGCTGAGGAGGGGGAGCACATGTTGAAGGAGCATGAGGACTACATGGCCTTGCCTTCTGGAATGATAGGCCCAGCTGTTATGCCAGCTAAACCTAGGACTGACACATCCAACCCCCCTTATCCACCTCCAGATCTGTTACAGCAACTGCTCCAGCATTCAACAGAGAAAATGAGGCATGTGGGGGGCTCAGTCCAGGCACTGAGTGACACCACGCTTAAGGACGCAGTGGAGTACTTTTCTTCCCTCTCTAAACTACTGGTTGAGAAGCTGCAGGCCAAGAAGGCAGCAGAGCAGAGGTTGGCTCAAGTGCTGTCACGGGTGGAGGAGGCTGCCATAAGGAAGTCTAACCCAGAGGATTTGGCACTGCACAGTGAAGACAGCGGTTTCGGGGGAGAAAATGAGAGTCTGACAGGGTCTGAGAGGCACCGCCGCCACCGTGGGAGTGCTGGCTCTGGAAGTTGTGGATCTGGAATCAACATTCGTGGTGCATTAGATACTCTGGCCAGCAATGTACCCAACCTGGTAGGCTATAATGAGtatgaagaagaggaggatgatgatgatgatgaagagtaTGAGGATGATGAAGGTGATGGGCCTGAAAGAAAGAGGTCGAACTCTGCCCCACCAGATCCCAGTCaagcttttcttttcatgtgtgCAAATTACATGCAGGATTGGCAGCCTACGGTCAAACGACCCCAGACTGCTGTCACTGCAACCAAACCTGAACACTCTTCATCCACCAGATGTGTAAACATTATAACAGACCTACAAAAGGGCCAGAGGAACTTGGATCAACAAATGAGAAAGATGTCTGAAATCCAAGGAAAGAAAGAGTTAGCAGGGCCTCATTATAACCTGTATAGAGCTGGACTAAGGAGGCATTCAGTAAGTGGATCAGCAGGTGCACAAAAAGGCCCCTTCAGAACAAATCAATCACCTGATTCCTTACCAATGTTGGCACCCCAGCCACCCAAGCACCACTCTGTCAGAAGGCTGATAAATACATTTAGCCAAGGGGTTGATGGTCGACCAGGGCAGAGCCTTGATAATATTCCACCTCATATCAGGAGGCCTAGGAAAAGTAATGAGGGGGGGATAGTCATCAATGGCAACAATAACAACAGTTGGCCTGAGGGCAGGGATGACCTGGATGTAGACAACCTACCACCTCCGCCCCCAGAGGTTCTGATGGACAATTCCTTCCAGAGTATTGAGGACATACCAGGAAATAAAGAAGGGTCACAGGAAGATTCAGTTGTGAGTCTCCCAATAATAAACCAAAAGAACAGAGTCTCCCAGCGCCTTAAGGCATCGGTGCACAATGTGGAAGTGCTGCCAAACCGGACCAGCATAAGGCCAAGCTCGATCAGTATCTTGTCTGCCCGTCCTGTCAGGCAGGATGCTGTTATGGGGACACAAGATGCAGAGCAGCAAACAGAAACTGATCTGGATCCAGAAATGGAGAAGGTTAACTTGCTCTACCAACAGGCACGTAAGATGATTCACCTGCGCAATGCAGGAGAATCTCCTGACAAGACAGATAATACAGAATTAAGCAGCAGAGGACCACCCCTTCAAGCCAGAATGGGCCAGAGATGTGGAAACAATGAATTATATGAAGGTGAGATGTCCTCTTACAGCCTGCCAGTGACAGCACCGCCTGTCTCTAGAGTCCGCTTACCGCCATCTTGTCCTTCTGTGTGCCACAAATTTCCAAGCCCTCCTGCGTTCCGACCTCAGCCCACCTCTAGACCCTCATCTCGCCCAAGTTCTCCAAGAAAGGTAACACGTGCCACAGATAACTGCACTGAAGAGATCATTCCATCTGTGTCCTTTCACGCTGCCCGCTCAGTCTTCTGTGGAAAGGACTCTCAGACCTGCATAGCCACTGGTAATACTGTACTTCCCAAATTATGGGGAGAGGCCTCCCGGGGCAGACTCCCCATGAGAGGGATAGACAACTCTACCCGCCGCACCCAATCAGAACAGAGGCCTAGTGTGACTTCCTATTCAGAGTTTTCCAAAGATGGCTGTTCAGCCTCTACCCAGGCCAAGGCGAACCAGCCTGTAAACACAAAATATAGGCCGGGCAGCCCTCTGATAACAGGAGACGATGCCCAGTTGGATCCAAGTGCTGCTGTGACAACAGCCTAGACCCCAGTTGTGATTGGACTGCGTTGCTAAAGTAAAATACAAGGTGGAAAGGGAATGAAGAAGGGGATTATGGATTAGCAGGATTCTGAGGTTTAGAacctttctcttttcttgtcttttttttcttgtcgtTCCTTTCATGGTGAAAGAGGTTTGTTCTGAGAGTGGGTGATACATTTATAATATTAATTCAAGTGGTTGGTAAGGACCTGAACATTTCTCTTAGATTGACATCTGAAAGGTCGGTCAGAATTTGTCTATATCAGTTTTTAGAAGGTCCTATTTAATcttgatatactgtacatgttgacTCTATAATCAACCTTGAATTTGTTTGACGTTAAAGATAAATGTACACATTTTGTTATGGCAGCCATTGGCACCCCCAAATGTCCTTTCAGATCAATGTTGAACCTCAGAGCTGGAAGGAAAATGTGGGATTTTGGGGTGCTTTTAGCTGCTATAACAAAATCAAAGAGTACCCCTCTAATTTATATAATAATCGGACTCAAGtgtttttgtatgcattttattttgtgtttggatGGTTTGTACTAGTTTCCCATCAGTGTTAACCATGTTTTCTACCTCGACTGTGTcccaataaaaagtaaaaaacata

Function

GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782808.1 True 3690 mRNA 0.47 2 5247945 5253700

Neighbor

gene id symbol gene type direction distance location
LOC120546193 NA coding downstream 124164 5115179 ~ 5123781 (-)
LOC120546227 htr1e coding downstream 333754 4871142 ~ 4914191 (-)
znf292b NA coding downstream 394862 4819147 ~ 4853083 (-)
cenpe cenpe coding downstream 463627 4743144 ~ 4784318 (-)
rad51 rad51 coding downstream 506300 4731388 ~ 4741645 (-)
LOC120547345 NA coding upstream 5765 5259465 ~ 5279720 (-)
lrfn2b LOC103354004,LOC104943823 coding upstream 135453 5389153 ~ 5588237 (-)
gopc gopc coding upstream 732737 5986437 ~ 6009440 (-)
LOC120546792 LOC104959018 coding upstream 816846 6070546 ~ 6073220 (-)
LOC120546794 NA coding upstream 1209240 6462940 ~ 6464802 (-)
G182368 NA non-coding downstream 11737 5235833 ~ 5236208 (-)
G182367 NA non-coding downstream 21275 5226393 ~ 5226670 (-)
G182358 NA non-coding downstream 102225 5145512 ~ 5145720 (-)
G182356 NA non-coding downstream 121924 5125813 ~ 5126021 (-)
LOC120547022 NA non-coding downstream 134224 5112241 ~ 5113721 (-)
G182413 NA non-coding upstream 133107 5386807 ~ 5388183 (-)
G182441 NA non-coding upstream 414017 5667717 ~ 5667916 (-)
G182443 NA non-coding upstream 442756 5696456 ~ 5696803 (-)
G182472 NA non-coding upstream 523552 5777252 ~ 5777743 (-)
G182501 NA non-coding upstream 656995 5910695 ~ 5911116 (-)
smim8 smim8 other downstream 444453 4745773 ~ 4803492 (-)
G182121 NA other downstream 1081949 4163358 ~ 4165996 (-)
trnav-aac_21 NA other downstream 1092113 4155760 ~ 4155832 (-)
trnav-aac_20 NA other downstream 1098967 4148907 ~ 4148978 (-)
G182102 NA other downstream 1147465 4100010 ~ 4100480 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other upstream 57806 5311506 ~ 5313715 (-)
G182474 NA other upstream 536589 5790289 ~ 5792938 (-)
G182502 NA other upstream 657612 5911312 ~ 5911909 (-)
cgrrf1 NA other upstream 979042 6232742 ~ 6269143 (-)
G182764 NA other upstream 1446791 6700491 ~ 6701117 (-)

Expression


Co-expression Network