LOC120547287


Basic Information

Item Value
gene id LOC120547287
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17697438 ~ 17701407 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782815.1
TTGTTATACAGAAAACAGGAAGAAGTGACGAGAAGTCAGCACCTAAAACTGCTTCGCGGGAATGTATTAGAAATCAAAATAAACTAAGACAATCCAGCAAATAGGGCTTTTGTTGATGTAACAGGGGATTTAGGTATGTTTATTAAAAGCTCCTGGAACTAAAAGTACTGAACCTGAGCTCTGGCTGAGCAAATACGAGTGAATCTGTGAAAGTGAAAGTAAGTTAGCTGTCCGATCAGAATGGCAGCCAACGTCTCACCGTCTGAGGTGGATTGCACCTGCCCTGTGTGCTGTGATATTTTTAAGGATCCTCTCGTCTTGTTGTGCGGTCACAGCTTCTGTAAACACTGTCTTCAGGAGTGGTGGAGACAGAGCGGACTCCAGACATGCCCGGTCTGTAAGGAAATATTTCCAATGGCTCAGCCTCCACGTAATCTGGCACTGAGAAACCTGTCTGACACTTTGAGACAAGAGAAGAAAAGTCAGAGAGCTAAATCTAAGGAGATCTGCAGTCTGCACAGTGAAAAACTCAAGCTCTTCTGTCAGGATGATCAACAGCTCATCTGTGTGATTTGTAGGGATGCACAAAAACATAAGAAACACAACTGCGCCCCCATCAACGAAGCGGCAGAACCCTGTAGGGCTAAACTGAAGCTTAAGGTGTTGCATTTAAAAACCAAACTGGGGTCATTTAAAGCACAAAAACTCACCTGTGATAAAATGGCAAGCCACATTAAGCTCCAGGCTCAGCAAACGGAGAAGACAATCAAAGAGGAGTTTCAGAAGCTTTACCAGTTCCTGCGAGCAGAGGAGGCTGCGAGGATCGATGCAGTGAGAAACGAGGCCACGCTCAAGAGTGAAGCAATGAACATCAGGATGGTTAATTTGACCACAGAGATCTCCTCGCTCACAGACAAAATCCAAACCATAGAGAGGGAGATGAAGGCTGAGGACTTCTCATTCATGCTGAATGTCAAAGACACTATGGTGCGATCTCAATGCAACCTGCCAAACCCAGAGACTCCATCAGAAGCCCTGATCGATGAGGCCAAACACCTGGGGAACCTGCAGTTCACAGTctggaagaagatgaagaacatAATCCAATACACTCCTGTAACTCTGGACCCCAACACTGGCAGCTCGATGTTGACTATATCAGAACACATGACTCGTTCAACAATGAGCGACAAGAGTCAGGCACTTCCTAACAACCCAGAAAGGCTATACAACTCAGACGTTTTTGGCTCTGAAGGCTTTAGGTCCGGAAAACACAGCTGGGATGTGGTGGTGGGGGGAGATTTTTGGGCTGTTGGTGTGGCTGCAAAAACCTCTGAAAAGATCTGGGCCATCTACAGGTGTAGTTGCACTGACATTCTGCGTGAACTTACTCCAGAGGATTATGTGAAATCTGTAGGCCTACCTATACATTCATTTCCCCAAACGGTCAGAGTGCAGCTAGATTATGACCATGGAATACTTTCATTTTTCGACCTCGATAGGAAAACACCCGTACACACCATCAAATACACATTCCCAGAAATGGTCTTTCCGTATTTTCGTGACTATGCAAAAGTCCTTCCAGCTGAATTGTCAGTGAGGATAAGACAACCCAGATAAACATCTCGCTTTACTGCAGAGTGCCAACAACTATTTTTTATTACTGTACATGTTTtcatatacattttaatattaatttgttacttcaaaatatttagtttatgtTTTTTCAGATTTCAATATAGTGGGGTAAATCTtggtctgtctcagtaacttttTCATGTCACATGTCAGTGACCAATGAAATGCTAAACTGAGTGTTGTCAGTTATCACGCAGGCTTTCCCTGTTCTCTTTTTGGTATAGTCCACCTTAAAGGGGCATTCCACTGATTGTACACATTAAGTTCAGTTTACTCTTCATGAGGAGTACAGTATATAGAAAACAGATGTATAATGTCCCTGTGGTTCTAAAAGTGTTTTCTAAAGTTAGCAAACATAACCCTGATGTTATTCAGGTTATCTCAGCTTGTGCTTTACTTTAATCTTTAGCCTGCGTCAACCAACTGGAGGGGTGGGGTTTGAAAGACATTTAGAAGCCACAATGGGTCTAATAAAAGATGCTGTTGTATTATTGGAcatgtaggatccagtgtttttggaggTTGACCCCATAATAGGGACTTAAAGTCCGGATTACTCAGCCTCCGCTGTTTTGATTTTGACTGTTCTTATTTTAGTCTAGAGCTTGTAAGTCCCCtaactatatatactgtatatacagtatacagtataatatactatactatactatatactatatatacactatatggatatactatatacagtatacttttAGAGTTGAATCATATAAATATGTTTTGCTCTGTTTTCTTGATGTTGTCATGATGTTTTCATGATGTTTTCCAGTTTTGGGGAGTTCTTCCTTATCTGTACTGAGGGTCTAAGGATTGAGGGTGTACGGATTGAATTTGTGATTTGGggctatataaatgaaaataacttAACCTGTACATGCTTTAATATCAGTCCAAATGTATCAAGTTAAATGTATTAGTTCATTTCTAGATATCTCTCTGGTGCATGTCTGTAAATGTCAGCTGTTATGCAGTGAAGGAAATAGTCAAAGTTATCTGATGCTAGCACCATCACAGATGGATGGTGTCTGCAGTAAGATGGCTTTCATGGCTATAATCCAGCTATAACCAAACTAATAAACAGAAATGCAGCTCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782815.1 True 2757 mRNA 0.41 6 17697438 17701407

Neighbor

gene id symbol gene type direction distance location
LOC120546939 NA coding downstream 39562 17656654 ~ 17657876 (-)
myb myb coding downstream 222542 17465918 ~ 17474896 (-)
armc1l LOC103368599,LOC104950028,LOC108242485 coding downstream 318810 17375197 ~ 17378628 (-)
iyd iyd coding downstream 386991 17307112 ~ 17310447 (-)
sec63 sec63 coding downstream 391212 17291166 ~ 17306226 (-)
rps12 rps12 coding upstream 59463 17760870 ~ 17763808 (-)
LOC120547356 NA coding upstream 60549 17761956 ~ 17762038 (-)
LOC120547359 NA coding upstream 60991 17762398 ~ 17762482 (-)
LOC120547353 NA coding upstream 61326 17762733 ~ 17762808 (-)
LOC120547258 NA coding upstream 65752 17767159 ~ 17779910 (-)
G185200 NA non-coding downstream 5996 17687876 ~ 17691442 (-)
G185125 sgk1 non-coding downstream 101441 17593366 ~ 17595997 (-)
G185124 NA non-coding downstream 110946 17586251 ~ 17586492 (-)
G185123 sgk1 non-coding downstream 119150 17565669 ~ 17578288 (-)
G185094 NA non-coding downstream 170073 17525518 ~ 17527365 (-)
G185236 NA non-coding upstream 214734 17916141 ~ 17916528 (-)
G185294 NA non-coding upstream 356013 18057420 ~ 18058172 (-)
G185295 NA non-coding upstream 358982 18060389 ~ 18061348 (-)
G185320 znf513,LOC102795572 non-coding upstream 436318 18137725 ~ 18140207 (-)
LOC120546287 NA non-coding upstream 482553 18183960 ~ 18186587 (-)
tbpl1 tbpl1 other downstream 66087 17623124 ~ 17631351 (-)
LOC120547341 NA other downstream 427804 17266359 ~ 17269634 (-)
gpatch2 gpatch2,LOC102785715 other downstream 861455 16825652 ~ 16835983 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other downstream 1179564 16490650 ~ 16517874 (-)
LOC120546332 akap7 other downstream 1509108 16146590 ~ 16188330 (-)
zgc:153284 NA other upstream 63398 17764805 ~ 17766910 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other upstream 209863 17911270 ~ 17913036 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other upstream 788408 18489815 ~ 18506198 (-)
LOC120546357 LOC106525279 other upstream 939014 18640421 ~ 18647401 (-)
abcd4 abcd4 other upstream 1076723 18778130 ~ 18790373 (-)

Expression


Co-expression Network