gja10b (gja10)


Basic Information

Item Value
gene id gja10b
gene name gja10
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 3640175 ~ 3644570 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782865.1
TTGGCTACACAGTGGGGTCTCGTCTGTCTTCAAGGGAGGACACAAGTGCCCTGATGCCTCCACAAATGAGTCTGCTCTTTATAAAGGCGTTATGCTGAAGCATTTGAGACAAGGACCATAGAAAACATataataataatattaataataataataataatgtgacaGAAGATGGGGGATTGGAACTTACTAGGGAGTATTTTAGAAGAAGTCCACATTCATTCCACCATCGTGGGGAAGATCTGGCTCACCATCCTCTTCATTTTCCGCATGCTTGTGCTCGGCGTTGCAGCTGAGGACGTCTGGGATGATGAGCAGAGTGAGTTTGTTTGCAACACGGAGCAGCCTGGCTGCAAAAATGTCTGCTatgaccaggctttccccatcTCCCTCATCCGCTACTGGGTGCTGCAGATCATCTTCGTATCCTCTCCGTCTCTGGTCTACATGGGGCATGCGTTGTACCGTCTGAGGACCCTTGAAAAGGAGAGGCACAGGAAGAAAGCCTGTCTGAAAGCTGAGCTGGAGGGGACAGACCCCATCCAGGAGGACCACAAGAGAATTGAGCGAGAGCTCAGGAAACTAGATGAACAGAAGAAAGTAAGGAAAGCTCCCCTTAGAGGTTCATTGCTGCGCACATATGTTTTCCATATCTTAACCAGATCTGTGGTGGAGGTAGGGTTCATTATAGGTCAGTGTGCTCTGTACGGTATCGGACTGTCTCCTCTGTACAAATGTGAGAGGTTGCCTTGCCCCAACAGTGTTGATTGTTTTGTGTCACGGCCAACAGAGAAGAACATTTTCATGGTTTTCATGCTGGTTATTGCTGGGGTTTCTTTATTCCTCAACCTCCTGGAGATTTTCCATCTGGGGGTGAAGAAGATCAAACAGAGCTTGTATGGATACAAATATGGAGACGATGAGAGCGTGTGCAGGTCAAAGAAGAACTCCATGGtgcagcaggtgtgtgtgctCACTAACTCCTCGCCAGAGAGGTTGATGCAGCTCACACAGATGACCCGCTCGGTCATATCGGATGCTCATAGGGAGACGGTGCCTTTGAATTTGGCCCTTGTGTCCCCTCAGAATAAGGAGGGGTCCAACAGCTCCAACCAGCAGCCTGCACAACCGTACCTGCCGAGTCAAGCGGACGTCCAGGGTCTCCAGCTGCTGGGGGTGGTGGAGCGGCGCTACACTCAGGACAACAGGAAGCCCTCGTGCAGCAGTGAAGAGTCAAATGAAGCTCAGGTGTCGGGTCGGCCGCAGTCCGCAGGACCTCGGCCTACACTGATGGCCGGCCACATGGAGATCCCAGCTGCCCTGAGGAACCCCCAGAGGATGCAGAGCAGAGTGAGTGTTTGTAAGGAGCTCAGTGACATGAGCGACTCGACAGAGAGCGACCACTACCCCACAGCCAGAAAGTGCAGTTTTATGTCCCGAGAACTGTCGGAGGCCACTCAGTCTGACAGCACCGATTCCCAGAGTGGACCAGACGTCGAGGCCCAGCACCTCAACCAGGGAGAGAGTCCCGCGGTAACCCCGCCGCCTCCAGCAAGCGGGAGGAGGATGTCCATGagcATGATTCTGGAGCTGTCTTCaatcatgaaaaagtaaaaaggaGCGTTTTGTGACCAGGCTAGCTGCGAGGGCTCCTGTCATCCTGTCTCCAGCTGTAACGGG

Function

symbol description
gja10 Predicted to enable gap junction channel activity. Predicted to be involved in cell-cell signaling. Predicted to act upstream of or within detection of light stimulus involved in visual perception; gamete generation; and synapse assembly. Predicted to be located in gap junction. Predicted to be part of connexin complex.

NR:

description
PREDICTED: gap junction alpha-10 protein

GO: NA

KEGG:

id description
K07631 GJA10; gap junction alpha-10 protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782865.1 True 1679 mRNA 0.52 3 3640175 3644570

Neighbor

gene id symbol gene type direction distance location
ufl1 ufl1,LOC104942535 coding downstream 1026640 2590462 ~ 2613535 (-)
col10a1b col10a1,LOC104966941,LOC107384801 coding downstream 1233020 2400734 ~ 2407155 (-)
frk frk,LOC102794634 coding downstream 1256090 2359433 ~ 2384085 (-)
LOC120546265 NA coding downstream 1314897 2322664 ~ 2325278 (-)
LOC120547226 hs3st5,LOC102794156 coding downstream 1476432 2035665 ~ 2163743 (-)
casp8ap2 NA coding upstream 16983 3661553 ~ 3678597 (-)
ankrd6b ankrd6 coding upstream 128600 3773170 ~ 3822913 (-)
LOC120547034 LOC104954367 coding upstream 230590 3875160 ~ 3884613 (-)
ephx1 ephx1,LOC102787086 coding upstream 240395 3884965 ~ 3890650 (-)
LOC120547172 NA coding upstream 533003 4177573 ~ 4184958 (-)
G181920 bach2 non-coding downstream 11372 3622982 ~ 3628803 (-)
G181916 bach2,LOC102797464 non-coding downstream 45791 3593995 ~ 3594384 (-)
G181912 NA non-coding downstream 112938 3526132 ~ 3527237 (-)
G181877 map3k7,LOC102796968 non-coding downstream 127375 3478730 ~ 3512800 (-)
G181879 NA non-coding downstream 177498 3462410 ~ 3462677 (-)
G181922 NA non-coding upstream 2283 3646853 ~ 3647787 (-)
G181929 NA non-coding upstream 7225 3651795 ~ 3652606 (-)
G181932 NA non-coding upstream 13801 3658371 ~ 3659550 (-)
G182004 mdn1 non-coding upstream 108083 3752653 ~ 3755268 (-)
G182018 NA non-coding upstream 186180 3830750 ~ 3831397 (-)
G181919 bach2 other downstream 29846 3608847 ~ 3610329 (-)
G181860 NA other downstream 264067 3375765 ~ 3376108 (-)
G181297 NA other downstream 3000662 638810 ~ 639513 (-)
G181206 NA other downstream 3560865 57976 ~ 79310 (-)
G181196 NA other downstream 3591422 47081 ~ 48753 (-)
srp9 srp9 other upstream 247067 3891637 ~ 3893175 (-)
G182061 NA other upstream 262047 3906617 ~ 3912279 (-)
G182059 NA other upstream 263977 3908547 ~ 3914015 (-)
G182102 NA other upstream 455440 4100010 ~ 4100480 (-)
trnav-aac_20 NA other upstream 504337 4148907 ~ 4148978 (-)

Expression


Co-expression Network