LOC120547345


Basic Information

Item Value
gene id LOC120547345
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 5259465 ~ 5279720 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782918.1
TTTGTTTCACACCATTCAGGATGCCGATGTGCCGCCTGCTGTGCAGCTTCTTCTTGGCCCTTATAATACTGAGCAGCATCCCGGCTAGTGTGGATGGATGTGATTATGCTCAGTCCATTTGCGGTGCCCAAGCTCCTGGTGATGTTGTGATCGGTATAATGCTGCCATGTCATAGTAAAGTGTCTCTTCAAGAACGGATTAGACCCGAAAGCTTCCAGTGCTCTGATTTTGATCTGGTGTCGTTTATGAGATCATTGGCTACAATCCACGAAATTGATGAGATAAATGCAGCTGGCTTCCTCCCAGGAGTGCATCTTGGATATTTGATGTGTGACACGTGCTCCTTTGCAAGCAAGGCGTTGGGGGATGTGGACTACATGCTCGAAGGCAACAGGACTTTAAATGTGAAGTGCAACTACACCGAATTCAGGCCCAAAGTCAAGATTATTTTAGGAGCTTTAAACTCTGATGTGTCCATCGCTTTGGCTGGCCTGCTAAATGTGTACATGGTCCCTCTACTGAGCAGCACATCATCGGCACCCAAACTGAGTGATAAGTTGCGGTTCCCATCTTTCTTGCGCACTATTCCCAGTGACAAGCATCAGACCAAAGCAGTGGCCAAACTGATGAAACACTATGACTGGAACTGGGTCGGGGTCGTGTATGGGGATGATGAATACGGGAAAGCAGCTTTCCAGAGCTTCCTCGCGGATGCTAAGGCAAATAATGTGTGCTTGGCCTACCAGGAGGTTTTGCCTCATTACCTTGATAATTCACAGGCCATGGTACGTATTAAGCAAGTCGCCGAGCAGATCCGCTCCTCCAGTGCCCAAGTGGTACTGCTAATCCTTAAGTCAGATCTGGTGGAGGGCCTTTTTAGGGAAATGATCGAGACCAACACATCAAGGATTTGGATTGCCACTGATGCCTGGTCCAGGAGCAGGTCCATTGCCCAAATGGATAGCATCAACAAGGTTGGGGACATCTTGGGCTTCACGTTTCTTTCAGGCAAGAGTGATTCATTTGAAAAATATCTGAAGAATCTGACAGCAACCCCAGGAGGATACAACTACTTCATTGAAGAATACAAGAGCCTAAGATTCAACTGCACCCCAGAATGTGACTCCAAAACACCTCCATCCTATTGTTCCATACCTGATCTCAAGAAAATTAAATCTAGCAATGCATGCAATTTCAAGGATCCCCAAGAGCAAAATGATGACTATCTTGTAAACACTCTGGATACAAGTCAAGCCTTCCTTCACAAAGTAGCTGTGCAGGCTGTAGCAAATGCCCTCAAAAAGCTACTGAAGTGCAACAGTTCATTATGCTTGGGAGAAATAAACTTCCCACCATGGAAGCTTCTTGAAGAACTGAAGAAAGTAAACTTCAGTTATGACAACCAGAGTTTCTTTTTTAACGAAAATGGTGATTTTGCAAATTTTTATGAGCTCATCATGTGGAAAACGGATGGGGAATATAGAAAAGCTCAACGGATTGGGAATTACAAAGTTTCTAATCAAACAGTTGAAGTCCAGATAAACATCACCTGGCTTTCAACAGCCAATACCACGAACCCTCAGTCTAGATGCTCAGAGCCCTGTCCCCCTGGCTCAGTAAAAAAGATCTTGAACGAATCCTGCTGTTACAACTGCATCCCATGTGTGGAGGGGACCTATTCAGATGAACCGGATCTTAATAACTGCAAACCCTGTGAAAGTGGAACCTGGTCTCTCAAGAATTCGACTGGGTGCAAGCCAAGAACAGAGTCTTACATGAAATGGCGCGATCCTCACCCAATCGTCATGATGGCTGCAGCAGCCTTTGGTATCTTGCTCTTGTTGGTTATCTTCATTATCTTTTTAGTGTACAGAGATTCCCCACCTATGAAAAGAGCTGAGGTGAGATTGTCCTGTGTGATGATGGCTGGTCTATCAGTGAGCTTTGCAAGTGTCATATGCTTCATGGGCAAGCCCAACGTACATTTATGCCGTGCCCGCCAGGTAATGTATGCTATGGGCTTCaccctgtgtgtgtcctgcatCCTAGTCAAAGCCTATCGTACTTTCCTGGCTTTCCTTCCCTTTGGTCAGCTGACAAGCAGGCAACTACACAAACTTTACCATCCACCTGCAATTGTCATCATCATAACTACTCTCCAGGGGATCATCTGTCTTCTTTGGCTGATCTTTGATTCTCCTGATATTGACCACACACCTCCATCTCCACAAAGCATGACAAAACTAATCCACTGTGATGAAGGTAAAACATATATAGGTTTTGGCATTATGTTGAGCTACATAGCTCTGTTATCATTGATTTGCTTCCTCTTGGCCATCAAAGGCAGGAAGGTTCCACAGGAGGTCAGTGAAACAGGCTACATAATCTTTAGCATGCTAATGTACTTGTTTGTATGGGTGTGTTTCATCCCAGTTTATATCACCAACAATGAAAATGGCACTCCTGTGCAGGCTTCAGCCATTCTAGTGTCCAGCTATGGCATCATCTTCTGCCATTTTTTACCCAAGTGCTATGAAGCACTTTGGGGttcaaagacaaacacaatggAGAAGATTCTAAGAAAATGGCATGTCATCTCCAGTCCAAATCTTGATTCTGTGACAGAGATAGCTATAGATAACCCTGGAAAGAACCCTGGAAAGAATACACACTCACTAAAGAGTGACAGAtattccatatcaagtacaacAACTATATTGAGGAGCTCAGGGACGCTAAGCGAGACCAGCCATACTGATTCAGTGCTGGACATAACGGATATGTCCACTGAAATGATGCATGCCTATCTTAGGCTAAGAACAACAATTAGGAAACGCAGTATATCCTTCTGAAAAGGGTTCCAGTGAAATTGTATTGCACTGATATTCAGTTATACTCTCTCTTCTAGtctattaaaatattttaatattgaaGAAGttgtttttcaaccttttctcgtcactaaacaacagttttaatgtcttccagtcaggttttttGACCACACCACACAGGTCTTCAATGACACCACTGAAATACAGACAGAGCAAAGTTTCAGTCTTCGTATCAcatgatctcagtgctgcatttgacccCAAATTAATAACAGACctattggaaaactgggttggacTTTCTGGCACATCACTAAACTGGTTTAAATCCTACTTGAAGAACAGGGATTACATATCTGAGGAGACAAAAATGACATgcagagttccccaaggctccattcATAGGCCTCTTCTGTTTGACATTTACATGCTTCCACTAGCTCGGataatggaaaacaacaaaattagACACATATTTACATAACCATGTCCAATGCAAACACTGagtatgtgcattgaacagattaacaATTGGATTTGCCAGaattaaagacaaaactgaggtagttgtttttttaaaccaaagaaAAATGATGAAAAGTCGGCGCTCAGCTTCAATCTGTAATGGGCAATGTTTAAAACAACTGACCAAGCcagaaatctaatctaatcattGACTAACTTGCAATAGCCACATTAAGACTTCTAAGGAAGGAAGTACTACAACCATAGTACTTCTACCTTAGAATATATCAACAGTTAAgaacttatgtctcagcaggatttggaaaaacctGTCCATGCCTTTATGTTCAGTAGATTTGACTACTATAACAGGTACTTCCTAACAAATCAattagacagctgcagctgattaaAAACACTGCTTGAGTCCTTACTAAGACAAAAAAATGggtcacatcactccagttccgAGGTCTTCACATTGGCTTCCTGTCTCTcaagaattgattttaaaacaCTACTGTTGGTTCATACAGTACTGAATGGTTTAGGCCCAAAATACATTCCTTACCTGCTACTACATTGTGAACcatccagacctctcaggtcttCTGGGTcaggtctgctttctgtcaccacagtcagaactaaacatggagttgcagattttagtttttttgcatCATGTATCTGGAACAAACCCCCAGAAAACTGCAAGTCCGCTAtaactctgttcttttaaatcaaggctaaagacttttttgatgctgcctttgttttaaatcaagtgttacactgcactgtaacttgtattgatgtatttattgtattttataccGTTCTTATTCTATTTGAGCTGTTTATATGGTATTTAatgaatgtttttaatgttttttttactctttgttttatgtaaagcactttgaattgtatTGTTGCTGATATGTGCTATACACAAAGTAAATATAGCTGCCTTAAATTagcttgccttgccttaccatTTTCCCTATTTATAGACACTCTTTTGTAAGATATTTGTGCTGTAAATACATGTTAAGTTAAAATATGTGTTCTGCTGAAAGTTTTGCATTCTTCTATGCCAAATGTAACTCATTTGTACTGTATTGGCTACAACTACAAGTtatattaaagtaaaataagTGCA

Function

GO: NA

KEGG:

id description
K04622 GPRC6A; G protein-coupled receptor family C group 6 member A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782918.1 True 4464 mRNA 0.41 6 5259465 5279720

Neighbor

gene id symbol gene type direction distance location
LOC120547277 NA coding downstream 5765 5247945 ~ 5253700 (-)
LOC120546193 NA coding downstream 135684 5115179 ~ 5123781 (-)
LOC120546227 htr1e coding downstream 345274 4871142 ~ 4914191 (-)
znf292b NA coding downstream 406382 4819147 ~ 4853083 (-)
cenpe cenpe coding downstream 475147 4743144 ~ 4784318 (-)
lrfn2b LOC103354004,LOC104943823 coding upstream 109433 5389153 ~ 5588237 (-)
gopc gopc coding upstream 706717 5986437 ~ 6009440 (-)
LOC120546792 LOC104959018 coding upstream 790826 6070546 ~ 6073220 (-)
LOC120546794 NA coding upstream 1183220 6462940 ~ 6464802 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding upstream 1482991 6762711 ~ 6800793 (-)
G182368 NA non-coding downstream 23257 5235833 ~ 5236208 (-)
G182367 NA non-coding downstream 32795 5226393 ~ 5226670 (-)
G182358 NA non-coding downstream 113745 5145512 ~ 5145720 (-)
G182356 NA non-coding downstream 133444 5125813 ~ 5126021 (-)
LOC120547022 NA non-coding downstream 145744 5112241 ~ 5113721 (-)
G182413 NA non-coding upstream 107087 5386807 ~ 5388183 (-)
G182441 NA non-coding upstream 387997 5667717 ~ 5667916 (-)
G182443 NA non-coding upstream 416736 5696456 ~ 5696803 (-)
G182472 NA non-coding upstream 497532 5777252 ~ 5777743 (-)
G182501 NA non-coding upstream 630975 5910695 ~ 5911116 (-)
smim8 smim8 other downstream 455973 4745773 ~ 4803492 (-)
G182121 NA other downstream 1093469 4163358 ~ 4165996 (-)
trnav-aac_21 NA other downstream 1103633 4155760 ~ 4155832 (-)
trnav-aac_20 NA other downstream 1110487 4148907 ~ 4148978 (-)
G182102 NA other downstream 1158985 4100010 ~ 4100480 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other upstream 31786 5311506 ~ 5313715 (-)
G182474 NA other upstream 510569 5790289 ~ 5792938 (-)
G182502 NA other upstream 631592 5911312 ~ 5911909 (-)
cgrrf1 NA other upstream 953022 6232742 ~ 6269143 (-)
G182764 NA other upstream 1420771 6700491 ~ 6701117 (-)

Expression


Co-expression Network