LOC120546179


Basic Information

Item Value
gene id LOC120546179
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 2187535 ~ 2191637 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636826.1
AGTTGGCAGCATTGTCCGTGTCCCTAACGATTATATAAGTCAGATCAGGACAGAAACAGCACTGTTAATACGATATAACATAGCATACATTAACGTACTGTAACAGTACTACTAACGCTCGCAGCTTAATGTATATTTACCAGATCACACATCTAACGCTAAAATCGTCTACAGTGAGGACGatagtttaaaaacaacaaccgtATACCACAACACATGTACACTCTTAAAAATACTGGGTTATTTTATTAACCCAACCACTGGGTTGAGGCTGTTTAACCCTGTATTATGTATATTCAACCCATATTGGGTTACTTACAGTAACCCAGTAGTTGGGTTAATGGTTTTGGACTGTGCCTTGATCTGAATAACCCAACCAATGGTCATTTTAACCCAGTGGTTGGGTTACATTCAAGTTTGGGTTCTCCTCCAacggtctttttcttttcctccgagGCGGGAGAACACTTTTGGAAACGCTGAAGCGATTGAATATGGAGGACTTTGTTAAACTAAAGTTAACAGAACGGCAACTTCTTGAGCTGATTGACACTTTTGCAGATTGTGCAGGACTTCGAGGTTCTTCATAAAGAGGCATCAGACTAAATCTTTGACCTGGAGGAGGTTCAGCGAGAAGCTTGTTCATGCGGCCCAGTGGGAGGGGTAGAAGCTCCAcgtgcagacagaga

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05133 Pertussis
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636826.1 True 689 lncRNA 0.42 3 2187535 2191637

Neighbor

gene id symbol gene type direction distance location
LOC120547226 hs3st5,LOC102794156 coding downstream 23792 2035665 ~ 2163743 (-)
lama4 lama4 coding downstream 526977 1604943 ~ 1660558 (-)
tube1 tube1 coding downstream 610072 1540093 ~ 1577463 (-)
si:dkey-119m7.4 LOC100698612,LOC104922931,LOC102792392,LOC102205754,LOC102310158,LOC101479579 coding downstream 633352 1522277 ~ 1554183 (-)
fynb fyn,LOC103458010,LOC106529781 coding downstream 671512 1399499 ~ 1516023 (-)
LOC120546265 NA coding upstream 131027 2322664 ~ 2325278 (-)
frk frk,LOC102794634 coding upstream 167796 2359433 ~ 2384085 (-)
col10a1b col10a1,LOC104966941,LOC107384801 coding upstream 209097 2400734 ~ 2407155 (-)
ufl1 ufl1,LOC104942535 coding upstream 398825 2590462 ~ 2613535 (-)
gja10b gja10 coding upstream 1448538 3640175 ~ 3644570 (-)
G181665 NA non-coding downstream 21545 2165704 ~ 2165990 (-)
G181633 NA non-coding downstream 238011 1945483 ~ 1949524 (-)
G181622 NA non-coding downstream 299907 1887061 ~ 1887628 (-)
G181620 NA non-coding downstream 345936 1841388 ~ 1841599 (-)
G181612 NA non-coding downstream 383024 1804232 ~ 1804511 (-)
G181684 NA non-coding upstream 84193 2275830 ~ 2276085 (-)
G181715 NA non-coding upstream 259058 2450695 ~ 2479367 (-)
G181724 NA non-coding upstream 305849 2497486 ~ 2499138 (-)
G181747 NA non-coding upstream 357870 2549507 ~ 2549932 (-)
G181751 NA non-coding upstream 366414 2558051 ~ 2561001 (-)
G181297 NA other downstream 1548022 638810 ~ 639513 (-)
G181206 NA other downstream 2108225 57976 ~ 79310 (-)
G181196 NA other downstream 2138782 47081 ~ 48753 (-)
G181860 NA other upstream 1184128 3375765 ~ 3376108 (-)
G181919 bach2 other upstream 1417210 3608847 ~ 3610329 (-)
srp9 srp9 other upstream 1700000 3891637 ~ 3893175 (-)
G182061 NA other upstream 1714980 3906617 ~ 3912279 (-)
G182059 NA other upstream 1716910 3908547 ~ 3914015 (-)

Expression


Co-expression Network