LOC120546287


Basic Information

Item Value
gene id LOC120546287
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18183960 ~ 18186587 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636852.1
TCTAAAGGACACCAACAGGTGGGAGGCCGCTTTGGAGGGGGGTGCTCCTGGTGGGATAGAAAAGGCCGATCTGCAAGGCCTGTTGTGGGCACAATCCACCGGGCCAGATATGGAAGAGGATGGTTGATCGCAGGATAGCTGAGGTGAAGAGAGCAGAGGGGCAGGATAAAGTTGTGGAATGGTTCTTGGGGAGGGATAGTTGAGATGATTTTTAGCTTTAAAGGGTGGAAAGGGCAGCATCAGGGACAAGGCATAAGGTTGGTCTGAGAGTTTAGTCTTTTCGGTGTGTTTCTGGTCACAGTGTTCCCTTTTCAATCTCTGCTTTCTGACCAACaagtttttgtaatttttttgttgGTGGTTAATGTAAAAGGTTAATATTTGACATCAACAAATGGACAGTACATTGACATGGTTTTCTGTTGAGTCAAAAGTCTTACAGATTCAGACGTTGCAGACTTTTTAGTCATTCTAGTTTCCTTGATTTGCAGCaccatgtgaaaaaaaagcattggTCAAACCAGTTGTTAGAtgttttctgtatgttttaCGATAGATAAGCACACCATGGCAGAGCCTGACACCTCTGTCAGGTGAGGGGAAGCTGAGGGTGTGACACAGGAAGGGATCAGGAAATTCTCATCACAGTCTAAGCAACGAAAAAGGGCTAGTCTTTCTAATGGCCATTTGGTTCGGAGCTGGTTGACATAACAGTGGTTAGGTTGATCAAGGAAGTCATCGCAAGACAGTGTAGGAGAGGCTGGCTGAACCCAATGTGGCCTGAAGCTCAACTCCAGCTGCCCACCACAAGAAAACCACAATAGGAGACGCAACGGGAGTCAATAAAGGTAAGGCTCAAGAGGACATGATGGCCTGACCCCTCGAAGATGATTTCCCCTTActatttcctctctttctcctctctcatgTCCTTCTTTTTCTATGTCCTCTACCCCTATAaccttccctctctcccccctcctcacAGCATGTCCCCTTCCTGCTCCCCCTCGCTCAGCCGCCTCTTGCAGCTGAAGCAACACGCCTTGCTGTGGCTGGTCAAACGGAACCAAGTCAGGTGTTTCTGTGAGGTTTGGTCCCCTTCAACCAGCTACTGCGTCGTGAATTCAGTCAGCGTGGAATCAAAGACACAGTGGCGTTGTGGTGTACGCTGCATACTTTGGGGGGTTTGTTAATGATAGATTATTTTTGTTCTCTGGTAGTTTGGTGTTGGTTGTTTCCTGTATGACAGTGGATGTTtgaaaaagcaaataaaagatTGCTGACAACATA

Function

GO:

id name namespace
GO:0032501 multicellular organismal process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636852.1 True 1293 lncRNA 0.47 2 18183960 18186587

Neighbor

gene id symbol gene type direction distance location
eif2b4 eif2b4 coding downstream 1345 18177413 ~ 18182615 (-)
snx17 snx17 coding downstream 11468 18141723 ~ 18172492 (-)
si:ch211-278j3.3 LOC100692210,LOC102294113,LOC101474259,LOC103355636 coding downstream 58388 18102262 ~ 18125572 (-)
si:dkey-71h2.2 LOC102796288,LOC101475494,LOC104959816,LOC106959609,LOC103138648 coding downstream 82866 18062720 ~ 18101094 (-)
LOC120547347 NA coding downstream 115347 18068498 ~ 18068613 (-)
baalcb LOC103363522,LOC102076438,LOC102297435,LOC101471426 coding upstream 11898 18198485 ~ 18203945 (-)
ptk2bb ptk2b coding upstream 107250 18293837 ~ 18314467 (-)
LOC120546602 NA coding upstream 472322 18658909 ~ 18667719 (-)
LOC120546605 LOC103372633,LOC101488065,LOC104964430 coding upstream 482374 18668961 ~ 18680534 (-)
LOC120546603 LOC104951063,LOC103372632 coding upstream 501220 18687807 ~ 18690956 (-)
G185320 znf513,LOC102795572 non-coding downstream 43753 18137725 ~ 18140207 (-)
G185295 NA non-coding downstream 122612 18060389 ~ 18061348 (-)
G185294 NA non-coding downstream 125788 18057420 ~ 18058172 (-)
G185236 NA non-coding downstream 267432 17916141 ~ 17916528 (-)
G185200 NA non-coding downstream 492518 17687876 ~ 17691442 (-)
G185368 NA non-coding upstream 131809 18318396 ~ 18318711 (-)
G185376 NA non-coding upstream 210301 18396888 ~ 18397170 (-)
G185454 NA non-coding upstream 449797 18636384 ~ 18636662 (-)
G185467 NA non-coding upstream 507967 18694554 ~ 18694796 (-)
G185438 LOC104951064,LOC103372631,LOC100709203 non-coding upstream 509094 18695681 ~ 18698228 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other downstream 270924 17911270 ~ 17913036 (-)
zgc:153284 NA other downstream 417050 17764805 ~ 17766910 (-)
tbpl1 tbpl1 other downstream 552609 17623124 ~ 17631351 (-)
LOC120547341 NA other downstream 914326 17266359 ~ 17269634 (-)
gpatch2 gpatch2,LOC102785715 other downstream 1347977 16825652 ~ 16835983 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other upstream 303228 18489815 ~ 18506198 (-)
LOC120546357 LOC106525279 other upstream 453834 18640421 ~ 18647401 (-)
abcd4 abcd4 other upstream 591543 18778130 ~ 18790373 (-)
LOC120546223 LOC102213764,LOC101481591 other upstream 717950 18904537 ~ 18907254 (-)
LOC120546238 efr3b,LOC101073163 other upstream 1147468 19334055 ~ 19354316 (-)

Expression


Co-expression Network