LOC120546499


Basic Information

Item Value
gene id LOC120546499
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14238426 ~ 14243275 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636876.1
TGCTACGTCAAGTCTGAAAGGTCTGATGCGAAAAAGGTGGCGGATTTTAAATTTTTGAATGATTTCTTTACCCTTTGATATGCAATTGTGCGGTTTTTAGAAGAACTTGTTTCCATATGAGGAAGAAAAAGGGTTTATGTCCAATCGGTATTTCGATGAACACCCGGAAACAAACTGGACTGGACAAGCAGCGGCTCCACTGTTGGATGTCAATGAAGCTCGGCAACCGGTTTAGACAGGCATCAGTATTGGCCAATAGAGCAATAATGCACACCGGGTGAGGCAGTGAAGCACAGCCTGGTTTACAGCAGCTCCGAGCACATGATTCTTCCAAGGTGATTGGATTCAGAGGACAGCCAGCCCTATGTACTCCTCATACTGCAGCAATAACCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636876.1 True 394 lncRNA 0.46 4 14238426 14243275

Neighbor

gene id symbol gene type direction distance location
bmp2b bmp2 coding downstream 251025 13981265 ~ 13987401 (-)
fermt1 fermt1 coding downstream 281288 13946704 ~ 13957138 (-)
trmt6 trmt6 coding downstream 293593 13938613 ~ 13944833 (-)
LOC120546266 slc23a2,LOC100699458,LOC101468039,LOC108231760,LOC106518547,LOC102297661 coding downstream 320302 13911571 ~ 13918124 (-)
gpcpd1 gpcpd1 coding downstream 328294 13889340 ~ 13910132 (-)
pak5 pak5,LOC102790572 coding upstream 1166 14244441 ~ 14322141 (-)
LOC120547016 LOC103375044,LOC104947369,LOC101079388,LOC102209315 coding upstream 92364 14335639 ~ 14359390 (-)
magl NA coding upstream 117238 14360513 ~ 14378555 (-)
LOC120546406 NA coding upstream 136739 14380014 ~ 14381177 (-)
LOC120546407 NA coding upstream 144245 14387520 ~ 14388443 (-)
G184208 NA non-coding downstream 6721 14187428 ~ 14231705 (-)
G184217 plcb4 non-coding downstream 13207 14222975 ~ 14225219 (-)
G184204 plcb1 non-coding downstream 96620 14119022 ~ 14141806 (-)
G184162 NA non-coding downstream 395949 13842272 ~ 13842477 (-)
LOC120546199 NA non-coding downstream 839851 13339183 ~ 13398575 (-)
G184224 NA non-coding upstream 5939 14249214 ~ 14328936 (-)
G184286 NA non-coding upstream 150172 14393447 ~ 14394111 (-)
G184289 NA non-coding upstream 165713 14408988 ~ 14409257 (-)
G184290 NA non-coding upstream 170981 14414256 ~ 14416171 (-)
G184291 LOC103359912,LOC104959468 non-coding upstream 173597 14416872 ~ 14417248 (-)
mfsd2b mfsd2b other downstream 747283 13473683 ~ 13491143 (-)
fkbp1b fkbp1b other downstream 770361 13458602 ~ 13468065 (-)
runx2b runx2,LOC102312376 other downstream 934642 13255885 ~ 13303784 (-)
hmgn3 hmgn3,LOC104958971 other downstream 1022526 13145464 ~ 13215900 (-)
LOC120547209 NA other downstream 1230558 12960498 ~ 13007868 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other upstream 228926 14472201 ~ 14498370 (-)
naa30 naa30,LOC102795089,LOC104960600 other upstream 328105 14571380 ~ 14612946 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other upstream 413902 14657177 ~ 14667601 (-)
rps29 NA other upstream 866965 15110240 ~ 15111479 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other upstream 1545551 15788826 ~ 15795638 (-)

Expression


Co-expression Network