LOC120546688


Basic Information

Item Value
gene id LOC120546688
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34717037 ~ 34719185 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636915.1
CACGGCCCAGAGACCTCGCTTGTTTAAAACTTAAATGGACCACACCTGGGAAGCAGCATCTAGACGTCATGGACTTAGTAGAGGATTAAATACATACAGGCACTTGATGACGAAATGGCTCCAAAGATTTGTGGTGCCACAAATCCCCCATCCACAATTGATGATACTGAAGAGCTGACCACTGAGAGCAAGTGCATCCATACAGCCGTCAGCCACCCAAATCAGACCAGTCCAGAGCTCGGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636915.1 True 245 lncRNA 0.49 3 34717037 34719185

Neighbor

gene id symbol gene type direction distance location
LOC120546672 NA coding upstream 92864 34622056 ~ 34624173 (+)
LOC120546456 NA coding upstream 121431 34584047 ~ 34595606 (+)
LOC120546680 rrm2 coding upstream 145189 34559932 ~ 34571848 (+)
LOC120546653 NA coding downstream 61153 34780338 ~ 34796403 (+)
LOC120546655 NA coding downstream 118013 34837198 ~ 34845092 (+)
LOC120546649 NA coding downstream 137651 34856836 ~ 34895534 (+)
LOC120546635 NA coding downstream 186806 34905991 ~ 34927163 (+)
allc allc coding downstream 209233 34928418 ~ 34941331 (+)
G189590 NA non-coding upstream 1604 34714902 ~ 34715433 (+)
G189597 NA non-coding upstream 29150 34687524 ~ 34687887 (+)
G189589 cpsf3,LOC102220704,LOC107081181 non-coding upstream 54961 34653228 ~ 34662076 (+)
G189584 NA non-coding upstream 90282 34624768 ~ 34626755 (+)
G189583 NA non-coding upstream 99585 34613621 ~ 34617452 (+)
LOC120546687 NA non-coding downstream 862 34720047 ~ 34722697 (+)
G189711 NA non-coding downstream 111491 34830676 ~ 34836404 (+)
G189720 NA non-coding downstream 216332 34935517 ~ 35084911 (+)
G189735 NA non-coding downstream 230919 34950104 ~ 34950650 (+)
G189732 NA non-coding downstream 247146 34966331 ~ 34984803 (+)
G189582 NA other upstream 17546 34663015 ~ 34699491 (+)
G189577 NA other upstream 71727 34564785 ~ 34645310 (+)
LOC120546652 NA other upstream 86102 34627478 ~ 34630935 (+)
G189555 NA other upstream 109699 34587078 ~ 34607338 (+)
G189545 NA other upstream 164672 34549369 ~ 34552365 (+)
LOC120546458 NA other downstream 84418 34803603 ~ 34827491 (+)
G189738 NA other downstream 290315 35009500 ~ 35010825 (+)
G189721 NA other downstream 295210 35014395 ~ 35076967 (+)
LOC120546683 NA other downstream 426304 35145489 ~ 35147428 (+)
G189723 NA other downstream 439038 35158223 ~ 35166388 (+)

Expression


Co-expression Network