LOC120546690


Basic Information

Item Value
gene id LOC120546690
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35536705 ~ 35538563 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636917.1
cagaggaggctcttctgaagctgctgccagtggtcaaagcctccaacaaagctctACCGAGTcaaagagaagctgtgaagctctgtcctcagttctcaacTCTGAGTCCTATAGTCTGAGaaagctggacctgagtaacaacgacctgcaggattcaggagggaagctcATCTCTGCTGGACTTCAGAGTCCACAATGTACACTAGAGACTCTCATcgtatttccttggagaacgttggcacca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636917.1 True 244 lncRNA 0.50 3 35536705 35538563

Neighbor

gene id symbol gene type direction distance location
ccr6a NA coding upstream 133436 35389709 ~ 35403269 (+)
vta1 vta1 coding upstream 190775 35204206 ~ 35345930 (+)
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding upstream 343440 35187916 ~ 35193265 (+)
allc allc coding upstream 595374 34928418 ~ 34941331 (+)
LOC120546635 NA coding upstream 609542 34905991 ~ 34927163 (+)
LOC120546647 LOC100696183,LOC102786976 coding downstream 305199 35843762 ~ 35856031 (+)
LOC120546641 NA coding downstream 694387 36232950 ~ 36257742 (+)
LOC120546639 NA coding downstream 730725 36269288 ~ 36313267 (+)
LOC120546666 NA coding downstream 791582 36330145 ~ 36333053 (+)
LOC120546651 NA coding downstream 1127518 36666081 ~ 36681833 (+)
G189790 NA non-coding upstream 25805 35510425 ~ 35510900 (+)
G189784 NA non-coding upstream 26708 35432675 ~ 35509997 (+)
G189767 NA non-coding upstream 90284 35258578 ~ 35446421 (+)
G189772 NA non-coding upstream 159762 35328189 ~ 35376943 (+)
G189771 NA non-coding upstream 291324 35244524 ~ 35245381 (+)
G189801 NA non-coding downstream 60551 35599114 ~ 35787979 (+)
G189809 NA non-coding downstream 126631 35665194 ~ 35670696 (+)
G189831 NA non-coding downstream 259047 35797610 ~ 35817091 (+)
G189829 NA non-coding downstream 270263 35808826 ~ 35820379 (+)
G189827 NA non-coding downstream 277596 35816159 ~ 35822212 (+)
LOC120546462 NA other upstream 3722 35526848 ~ 35532983 (+)
G189770 NA other upstream 221668 35241255 ~ 35315037 (+)
G189769 NA other upstream 236727 35249741 ~ 35299978 (+)
G189723 NA other upstream 370317 35158223 ~ 35166388 (+)
LOC120546683 NA other upstream 389277 35145489 ~ 35147428 (+)
LOC120546463 myh6,LOC108251423,LOC102786665,LOC780532,LOC103381356,LOC103031694 other downstream 158564 35697127 ~ 35877941 (+)
zbtb25 zbtb25 other downstream 373933 35912496 ~ 35917525 (+)
G189858 NA other downstream 443255 35981818 ~ 36019599 (+)
G189895 LOC107578167,LOC107555837,LOC103375881,LOC103392301 other downstream 675318 36213881 ~ 36214599 (+)
G189897 NA other downstream 694102 36232665 ~ 36375834 (+)

Expression


Co-expression Network