LOC120546694


Basic Information

Item Value
gene id LOC120546694
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34596185 ~ 34607342 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636921.1
tctctttatctatctgtctgtctctctctatctctctatctctctctctatctgtctgtctctctctctatctgtctgtctgtctctctctctgcctgtctgtctgtcgtcttTGTTAATCAGTCGATCAACAGAAGAACAGTAACAACCTTTGTTGATAATGAATATTATTTCTATAAGAAGAAGAGACCATGCTGTGTGTTTTTAGCCTCTCCCATACGGAGCTCTCCTGAttagttttctgtttttatatctttGGGTTTCGGACCGACTGAATTtgagacatttttaaaaagatgaactgatgaagaaaataatCTTCAGTTTAATCAGTAATGAAATGAATGGTAATCCTTTCTTCTTCTCAGTGTCAGATgtaattattgtattatttctATGTATTATTTTAGTCTTTTGCAGGCTGTAAAGTCTTTTGATCGTTGACTCGTCTGTAAACTTTAAATCATATATACGCCTCAAACTGTAAAGCTAATGAAGAGTCTGGACCAGGTTCTGGACCACGTTCTGGACCAGGTTCTGGACCAGGTTCTGGACCAGGTTCTGGTGGAGCTGTGCTTCTCTAACTGCCTGATCCCAGATCTAATAAACTAACCATGTGAACCGCTCGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636921.1 True 630 lncRNA 0.39 2 34596185 34607342

Neighbor

gene id symbol gene type direction distance location
LOC120546456 NA coding upstream 579 34584047 ~ 34595606 (+)
LOC120546680 rrm2 coding upstream 24337 34559932 ~ 34571848 (+)
LOC120547363 NA coding upstream 26091 34569956 ~ 34570094 (+)
LOC120547362 NA coding upstream 30578 34565469 ~ 34565607 (+)
LOC120546659 rrm2 coding upstream 68539 34514822 ~ 34527646 (+)
LOC120546672 NA coding downstream 14714 34622056 ~ 34624173 (+)
LOC120546653 NA coding downstream 172996 34780338 ~ 34796403 (+)
LOC120546655 NA coding downstream 229856 34837198 ~ 34845092 (+)
LOC120546649 NA coding downstream 249494 34856836 ~ 34895534 (+)
LOC120546635 NA coding downstream 298649 34905991 ~ 34927163 (+)
G189549 NA non-coding upstream 4595 34590922 ~ 34591590 (+)
G189579 NA non-coding upstream 13682 34577317 ~ 34582503 (+)
G189548 NA non-coding upstream 33291 34542667 ~ 34562894 (+)
G189576 NA non-coding upstream 39031 34556798 ~ 34557154 (+)
G189575 NA non-coding upstream 50018 34544485 ~ 34546167 (+)
G189583 NA non-coding downstream 6279 34613621 ~ 34617452 (+)
G189584 NA non-coding downstream 17426 34624768 ~ 34626755 (+)
G189589 cpsf3,LOC102220704,LOC107081181 non-coding downstream 45886 34653228 ~ 34662076 (+)
G189597 NA non-coding downstream 80182 34687524 ~ 34687887 (+)
G189601 NA non-coding downstream 101384 34708726 ~ 34736954 (+)
LOC120546454 NA other upstream 10746 34531388 ~ 34585439 (+)
G189545 NA other upstream 43820 34549369 ~ 34552365 (+)
G189541 zdhhc14,LOC102790573,LOC102208331 other upstream 92430 34482864 ~ 34503755 (+)
G189570 NA other upstream 109008 34486424 ~ 34487177 (+)
G189544 NA other upstream 131288 34462908 ~ 34464897 (+)
LOC120546652 NA other downstream 20136 34627478 ~ 34630935 (+)
G189582 NA other downstream 55673 34663015 ~ 34699491 (+)
LOC120546458 NA other downstream 196261 34803603 ~ 34827491 (+)
G189738 NA other downstream 402158 35009500 ~ 35010825 (+)
G189721 NA other downstream 407053 35014395 ~ 35076967 (+)

Expression


Co-expression Network