LOC120546868


Basic Information

Item Value
gene id LOC120546868
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 29886864 ~ 29888884 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636969.1
GGACAGTGATACGGTGACGTTAAACTGCTCTGTGTCGACATATGATGGATGTACTCACACAGTGAAGTGGCTGtatgagggtaaaaaaaacTGAGTTTTGAGGGTCCAGATGACAGAGGCGTGACAACATCGCAGTCTGGCTGCTCGGCCACTGTCTCCTTTCCGACTTCTCATTTCCTGCAGGTTTCTAAGACGTATGAGTTGCTCAAGTGTAAAGTGACAGATGGTTACGTGCCCACCATAAAAGTGTTCCCCTTCAGTCCTCCTCAGTCCTCAGCTGGTACCGGTTGGTCTGCTCTGAACTACATCATGTTGGCTCTGCATGTGGCTGAAGTCCTCCTAATGGCTGGGATTACTGTTCTCCTCCTCAGAGCTCGAGtttctaaaaagAAATAATGGATGCTGGATCAGGGAGGTTGGGAGTTAAAAAGCTGGACAGCCCTGGGGACAAAGGCTTCCCTTCTCTGCACCTGATTAACACAAAGTGTCAGCCCGGAGCTGAACTGTGGTTTATTTTCCAGGGAACCGTAGAGCACCTGATGACAACACTGTGCATGGTGATGGAGATGAACATGGCGGCACTGTGAACTTTGAAAACGTTGGAGAGCCTTCTGTTTCTGTCAGACTCCCCTAGAGCTGGgcattatatcgatatcgtgatatgagactatagatatcgtcttagattttggatatcgtaaaatCGTAATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636969.1 True 713 lncRNA 0.47 4 29886864 29888884

Neighbor

gene id symbol gene type direction distance location
LOC120546867 NA coding upstream 4140 29876921 ~ 29882724 (+)
LOC120546866 LOC103363081,LOC108247050,LOC101159876,LOC107104461 coding upstream 11040 29861374 ~ 29875824 (+)
LOC120546480 NA coding upstream 515714 29315759 ~ 29371150 (+)
slc30a2 slc30a3,LOC102796772 coding upstream 666137 29196169 ~ 29220727 (+)
LOC120547117 gpr31,LOC104934219,LOC104957175 coding upstream 962101 28917291 ~ 28924763 (+)
LOC120546870 NA coding downstream 6541 29895425 ~ 29943833 (+)
LOC120546436 NA coding downstream 123271 30012155 ~ 30022642 (+)
LOC120546869 NA coding downstream 140066 30028950 ~ 30083063 (+)
zfand3 zfand3,LOC104930467,LOC103365830,LOC101473384,LOC100698322,LOC106531772 coding downstream 211075 30099959 ~ 30115805 (+)
galnt14 galnt14,LOC103365833,LOC102790467 coding downstream 236579 30125463 ~ 30323344 (+)
LOC120546865 NA non-coding upstream 93185 29787961 ~ 29793679 (+)
LOC120546861 NA non-coding upstream 226129 29659256 ~ 29660735 (+)
G188290 NA non-coding upstream 281765 29579635 ~ 29605099 (+)
G188288 NA non-coding upstream 308762 29576224 ~ 29578102 (+)
G188281 NA non-coding upstream 348412 29538175 ~ 29538452 (+)
G188321 NA non-coding downstream 39958 29928842 ~ 29985502 (+)
G188323 NA non-coding downstream 43666 29932550 ~ 29932860 (+)
LOC120546875 NA non-coding downstream 45710 29934594 ~ 29935486 (+)
LOC120546873 NA non-coding downstream 51322 29940206 ~ 30035201 (+)
LOC120546874 NA non-coding downstream 78086 29966970 ~ 29979067 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other upstream 241041 29645254 ~ 29645823 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other upstream 422990 29461849 ~ 29463874 (+)
G188207 clvs2,LOC107675107 other upstream 466137 29419376 ~ 29420727 (+)
si:ch211-245h14.1 NA other upstream 574500 29292705 ~ 29312364 (+)
G188167 ucn other upstream 749947 29134171 ~ 29136917 (+)
btbd9 btbd9 other downstream 195664 30084548 ~ 30097239 (+)
angel2 NA other downstream 436088 30324972 ~ 30336202 (+)
G188352 NA other downstream 722797 30611681 ~ 30882446 (+)
LOC120546905 NA other downstream 905335 30794219 ~ 30812452 (+)
hivep2a LOC103373864 other downstream 1280183 31169067 ~ 31309396 (+)

Expression


Co-expression Network