LOC120546922


Basic Information

Item Value
gene id LOC120546922
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 30635414 ~ 30638071 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636996.1
CGGTAATTCTGTCGGAAAAGTTGCAGTTGGTGTTTGGAGTCTGATTTGGAAAAGATCCTGGCTGGGATAGTCTTTGTCAGCTCCCTCCTTATTGATGTGTTATAGCTGGACTGCGAAGTTTTCATGTGATGGAGGCAGAATTTGTCTTATACTACTACTCCCCTTCTCTCAAAGTTCCTTACACAACTTGACCAACGCACTGAGCAGCTCATGAAAGTGTTGAAGAACAAAGGAGGCTCTGCAGGGAGGAAATCAGGATCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636996.1 True 263 lncRNA 0.44 3 30635414 30638071

Neighbor

gene id symbol gene type direction distance location
trnat-ugu_4 NA coding upstream 261676 30373666 ~ 30373738 (+)
galnt14 galnt14,LOC103365833,LOC102790467 coding upstream 312070 30125463 ~ 30323344 (+)
zfand3 zfand3,LOC104930467,LOC103365830,LOC101473384,LOC100698322,LOC106531772 coding upstream 519609 30099959 ~ 30115805 (+)
LOC120546869 NA coding upstream 552351 30028950 ~ 30083063 (+)
LOC120546436 NA coding upstream 612772 30012155 ~ 30022642 (+)
LOC120546909 NA coding downstream 31685 30669756 ~ 30673973 (+)
LOC120546901 NA coding downstream 176782 30814853 ~ 30821281 (+)
LOC120546904 NA coding downstream 188688 30826759 ~ 30830636 (+)
LOC120546903 NA coding downstream 199660 30837731 ~ 30850277 (+)
LOC120546902 NA coding downstream 206984 30845055 ~ 30850277 (+)
G188374 NA non-coding upstream 90151 30476757 ~ 30545263 (+)
LOC120546896 NA non-coding upstream 134170 30499354 ~ 30501244 (+)
G188367 NA non-coding upstream 199617 30411623 ~ 30435797 (+)
G188365 NA non-coding upstream 204922 30401721 ~ 30430492 (+)
G188363 NA non-coding upstream 236464 30393182 ~ 30398950 (+)
G188353 NA non-coding downstream 145547 30783618 ~ 30813785 (+)
G188421 NA non-coding downstream 382510 31020581 ~ 31020954 (+)
LOC120546487 NA non-coding downstream 445400 31083471 ~ 31086840 (+)
G188430 NA non-coding downstream 449739 31087810 ~ 31093393 (+)
G188438 NA non-coding downstream 461771 31099842 ~ 31100187 (+)
angel2 NA other upstream 299212 30324972 ~ 30336202 (+)
btbd9 btbd9 other upstream 538175 30084548 ~ 30097239 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other upstream 989591 29645254 ~ 29645823 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other upstream 1171540 29461849 ~ 29463874 (+)
G188207 clvs2,LOC107675107 other upstream 1214687 29419376 ~ 29420727 (+)
LOC120546905 NA other downstream 156148 30794219 ~ 30812452 (+)
hivep2a LOC103373864 other downstream 530996 31169067 ~ 31309396 (+)
LOC120546816 NA other downstream 967983 31606054 ~ 31614522 (+)
LOC120546196 LOC105017826 other downstream 1138892 31776963 ~ 31782066 (+)
myo6a myo6,LOC103369425 other downstream 1938385 32576456 ~ 32767003 (+)

Expression


Co-expression Network