LOC120547073


Basic Information

Item Value
gene id LOC120547073
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 10064593 ~ 10066286 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637025.1
TAAGATTATGTACCCAGTAtgctttttacattatttttttttttattaaataagaacacaaattaaattaacCTGCATTTGTGTACAGAGCTGCTCCTAAATGGAGCCAGCATGGGCAGACATCGACACCTTGAGGGAAGAGATTGCCAGGAGACTGATGGTTGATTCTGaAAACCTCAATGAACTCTGCCACTGTTGCGGGGAAATAAACACTGGGGAAAGTGACACCTTAGAGGCACCTATGGACCATTGGAATGTCCCAATGTGGATGAGGACTTTTGGTGTCCTGCATGCACATCACCAACACAAATGTTCATGACCTGACACTGTGGAGTCCTTCAACTTCATTAATAACATCACCCCGGACATCAAGTGGCAAAAGGACATCAAAAGCTTCAGCAGAGGATGTAGGCCTACTTCCGACTGCAATTCAAGCcagCTACAAGTTGTGGGTGCAGGGGTTTTCTGCTTGGGCCGGCACAAAAATGTCAGACCTGAAGCTCTATTTGGCCTGTGAGAGGTACCAGTCCCGAGCCATCACAGTGCAGCCATCACCGTCCTCcagaaatattttatttctctTAAAGCCTCAGACGTATAGGCCCCTCTCTCGCTCCTGCAGCATCCAactcagcagcagcacagaagaGGGTTGGTCTCTCTGCCCTGGTGGATGAGCCCTCCAGAAGCCATGGAGAAGACGGCAGAGACAGCCCGCTGCGACCTGGAGCAGACTAAGTGCAGGAGTTGATGCAGCCAGTCTTCCTTTGCTTCTTTGCATGTTGGCTGTTCCTGTGGATGCCACACAGGATCTTGCAGATGCACCTTACATTCCCCCAGCATTTGTGCACCAGTACTATGATAAAGGCTGGGCTGTACAGGACCCATCCAGAGGGTCCGGAGGGTGGTCACAGGGCATCATTAGGCAGCTGTCCCCAACTTACAGCTGCCAATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637025.1 True 956 lncRNA 0.49 4 10064593 10066286

Neighbor

gene id symbol gene type direction distance location
LOC120547068 NA coding downstream 118852 9944865 ~ 9945741 (-)
LOC120546991 NA coding downstream 209209 9853740 ~ 9855384 (-)
stmn4 stmn4 coding downstream 441882 9603488 ~ 9622711 (-)
paqr8 paqr8 coding downstream 507664 9550004 ~ 9556929 (-)
znf395b znf395 coding downstream 537165 9505432 ~ 9527428 (-)
LOC120547244 NA coding upstream 69714 10136000 ~ 10137776 (-)
cnstb LOC103373900 coding upstream 81789 10148075 ~ 10173978 (-)
kif26bb NA coding upstream 112023 10178309 ~ 10208325 (-)
lft1 LOC104927083,LOC104968260,LOC100695903,LOC101475792,LOC102299013 coding upstream 160530 10226816 ~ 10229005 (-)
fzd3a fzd3 coding upstream 280714 10347000 ~ 10379127 (-)
G183383 NA non-coding downstream 16361 10047957 ~ 10048232 (-)
G183382 NA non-coding downstream 19098 10045181 ~ 10045495 (-)
LOC120546255 NA non-coding downstream 94820 9935187 ~ 9969773 (-)
G183317 snap25,snap25a,LOC107719097,LOC102796069,LOC107698362,LOC107599071 non-coding downstream 217735 9829876 ~ 9846858 (-)
G183299 LOC103398511 non-coding downstream 346388 9716590 ~ 9718205 (-)
G183458 NA non-coding upstream 108450 10174736 ~ 10175355 (-)
G183457 NA non-coding upstream 110614 10176900 ~ 10177569 (-)
G183492 hnrnpu non-coding upstream 150065 10216351 ~ 10217126 (-)
G183497 NA non-coding upstream 154632 10220918 ~ 10233568 (-)
G183530 NA non-coding upstream 491201 10557487 ~ 10558119 (-)
G183176 NA other downstream 931121 9129573 ~ 9133472 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other downstream 1040028 9020960 ~ 9024565 (-)
LOC120546397 NA other downstream 1277375 8781328 ~ 8787218 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 1937929 8049458 ~ 8126664 (-)
G182977 NA other downstream 2039549 8024715 ~ 8025044 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 33192 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 388958 10455244 ~ 10610625 (-)
G183528 NA other upstream 454431 10520717 ~ 10521410 (-)
G183650 NA other upstream 1307822 11374108 ~ 11374615 (-)
ost4 NA other upstream 2841016 12907302 ~ 12908747 (-)

Expression


Co-expression Network