trnav-aac_16



Basic Information


Item Value
gene id trnav-aac_16
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 842285 ~ 842357 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_1003
GTTTCCGTAGTGTAGTGGTTATCACGTTTGCCTAACACGCAAAAGGTCCCCTGTTCGAAACAGGGCggaaaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1003 True 73 tRNA 0.49 1 842285 842357

Neighbor


gene id symbol gene type direction distance location
trnav-aac_15 NA coding upstream 4706 837507 ~ 837579 (+)
trnav-aac_14 NA coding upstream 7608 834605 ~ 834677 (+)
trnav-aac_13 NA coding upstream 10513 831699 ~ 831772 (+)
trnaf-aaa_1 NA coding upstream 13418 828794 ~ 828867 (+)
trnav-cac_11 NA coding upstream 16358 825855 ~ 825927 (+)
trnav-aac_17 NA coding downstream 2833 845190 ~ 845262 (+)
trnav-aac_18 NA coding downstream 5738 848095 ~ 848167 (+)
ppil4 ppil4 coding downstream 66814 909171 ~ 928036 (+)
LOC120546482 zc3h12d,LOC104941015 coding downstream 99494 941851 ~ 956304 (+)
amd1 amd1,dcam coding downstream 285158 1127515 ~ 1141921 (+)
G181305 NA non-coding upstream 162022 679416 ~ 680263 (+)
G181298 NA non-coding upstream 189485 652514 ~ 652800 (+)
G181286 NA non-coding upstream 204907 636983 ~ 637378 (+)
G181284 NA non-coding upstream 214233 627291 ~ 628052 (+)
G181261 NA non-coding upstream 242348 599696 ~ 599937 (+)
LOC120546155 NA non-coding downstream 23325 865682 ~ 867699 (+)
G181347 NA non-coding downstream 38122 880479 ~ 880898 (+)
G181357 ginm1,LOC102789516 non-coding downstream 61405 903762 ~ 905192 (+)
G181360 NA non-coding downstream 73431 915788 ~ 959465 (+)
G181431 NA non-coding downstream 304079 1146436 ~ 1146690 (+)
LOC120547162 katna1,LOC104968001 other downstream 28724 871081 ~ 896358 (+)
slc16a10 slc16a10,LOC106607741 other downstream 344745 1187102 ~ 1239126 (+)
marcksa marcks other downstream 1103201 1945558 ~ 2011423 (+)
nt5dc1 nt5dc1,LOC102795200 other downstream 1545649 2388006 ~ 2497160 (+)
dse dse,LOC102795484 other downstream 1660411 2502768 ~ 2533772 (+)

Expression



Co-expression Network