trnav-aac_17



Basic Information


Item Value
gene id trnav-aac_17
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 845190 ~ 845262 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_1004
GTTTCCGTAGTGTAGTGGTTATCACGTTTGCCTAACACGCAAAAGGTCCCCTGTTCGAAACAGGGCggaaaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1004 True 73 tRNA 0.49 1 845190 845262

Neighbor


gene id symbol gene type direction distance location
trnav-aac_16 NA coding upstream 2833 842285 ~ 842357 (+)
trnav-aac_15 NA coding upstream 7611 837507 ~ 837579 (+)
trnav-aac_14 NA coding upstream 10513 834605 ~ 834677 (+)
trnav-aac_13 NA coding upstream 13418 831699 ~ 831772 (+)
trnaf-aaa_1 NA coding upstream 16323 828794 ~ 828867 (+)
trnav-aac_18 NA coding downstream 2833 848095 ~ 848167 (+)
ppil4 ppil4 coding downstream 63909 909171 ~ 928036 (+)
LOC120546482 zc3h12d,LOC104941015 coding downstream 96589 941851 ~ 956304 (+)
amd1 amd1,dcam coding downstream 282253 1127515 ~ 1141921 (+)
rpf2 rpf2,LOC102791246 coding downstream 322820 1168082 ~ 1181768 (+)
G181305 NA non-coding upstream 164927 679416 ~ 680263 (+)
G181298 NA non-coding upstream 192390 652514 ~ 652800 (+)
G181286 NA non-coding upstream 207812 636983 ~ 637378 (+)
G181284 NA non-coding upstream 217138 627291 ~ 628052 (+)
G181261 NA non-coding upstream 245253 599696 ~ 599937 (+)
LOC120546155 NA non-coding downstream 20420 865682 ~ 867699 (+)
G181347 NA non-coding downstream 35217 880479 ~ 880898 (+)
G181357 ginm1,LOC102789516 non-coding downstream 58500 903762 ~ 905192 (+)
G181360 NA non-coding downstream 70526 915788 ~ 959465 (+)
G181431 NA non-coding downstream 301174 1146436 ~ 1146690 (+)
LOC120547162 katna1,LOC104968001 other downstream 25819 871081 ~ 896358 (+)
slc16a10 slc16a10,LOC106607741 other downstream 341840 1187102 ~ 1239126 (+)
marcksa marcks other downstream 1100296 1945558 ~ 2011423 (+)
nt5dc1 nt5dc1,LOC102795200 other downstream 1542744 2388006 ~ 2497160 (+)
dse dse,LOC102795484 other downstream 1657506 2502768 ~ 2533772 (+)

Expression



Co-expression Network