trnaa-agc_21


Basic Information

Item Value
gene id trnaa-agc_21
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 26880161 ~ 26880233 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1085
GGGGgattagctcaaatggtagagcgCTCGCTTAGCATGCGAGAGGTAGCGGGATCGATGCCCGCATCCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1085 True 73 tRNA 0.59 1 26880161 26880233

Neighbor

gene id symbol gene type direction distance location
tmem214 tmem214 coding upstream 1583 26860070 ~ 26878578 (+)
LOC120546589 mapre3 coding upstream 23268 26843772 ~ 26856893 (+)
LOC120546590 NA coding upstream 37607 26831828 ~ 26842554 (+)
LOC120546588 dpysl5 coding upstream 49165 26796434 ~ 26830996 (+)
LOC120546585 dnmt3a,LOC103381119,LOC103355283,LOC106945224,LOC101063003 coding upstream 87357 26733362 ~ 26792804 (+)
esco2 NA coding downstream 16147 26896380 ~ 26905243 (+)
trnat-cgu_2 NA coding downstream 101488 26981721 ~ 26981793 (+)
LOC120547023 LOC103357708,LOC100700775,LOC101482519,LOC105938917,LOC107377760 coding downstream 192737 27072970 ~ 27407359 (+)
c18h1orf131 NA coding downstream 592983 27473216 ~ 27478075 (+)
LOC120547108 NA coding downstream 669201 27549434 ~ 27553027 (+)
trnay-gua_55 NA non-coding upstream 540 26879533 ~ 26879621 (+)
G187536 NA non-coding upstream 555427 26324516 ~ 26324734 (+)
G187535 NA non-coding upstream 564507 26315122 ~ 26315654 (+)
G187508 NA non-coding upstream 607566 26272368 ~ 26272595 (+)
LOC120547280 NA non-coding upstream 630476 26247778 ~ 26249685 (+)
trnaa-agc_22 NA non-coding downstream 6901 26887134 ~ 26887206 (+)
G187672 NA non-coding downstream 7474 26887707 ~ 26888304 (+)
trnaa-agc_23 NA non-coding downstream 10051 26890284 ~ 26890356 (+)
G187692 NA non-coding downstream 36459 26916692 ~ 26918285 (+)
G187693 NA non-coding downstream 41650 26921883 ~ 26922238 (+)
LOC120546586 dtnb other upstream 142358 26695430 ~ 26737803 (+)
G187574 NA other upstream 194654 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 427796 26438486 ~ 26452365 (+)
tfap2d tfap2d other upstream 448764 26413691 ~ 26431397 (+)
gareml garem2 other upstream 597153 26265189 ~ 26283008 (+)
LOC120546215 LOC104930085 other downstream 147872 27028105 ~ 27038228 (+)
afdna afdn,LOC102779179 other downstream 1659167 28539400 ~ 28649123 (+)
ttll2 ttll2 other downstream 1992453 28872686 ~ 28883121 (+)
G188063 NA other downstream 2006257 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 2230725 29110958 ~ 29132700 (+)

Expression


Co-expression Network