trnal-cag_2


Basic Information

Item Value
gene id trnal-cag_2
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 28652602 ~ 28652684 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1089
GTCAGGATGGCCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGgcgtgggttcgaatcccactTCTGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1089 True 83 tRNA 0.63 1 28652602 28652684

Neighbor

gene id symbol gene type direction distance location
ncoa1 ncoa1 coding upstream 185729 28393107 ~ 28466873 (+)
ptrhd1 ptrhd1,LOC102782396,LOC103399259 coding upstream 269518 28381682 ~ 28383084 (+)
fam184ab fam184a,LOC101465847,LOC102781517 coding upstream 272754 28203630 ~ 28379848 (+)
man1a1 man1a1,LOC102782693 coding upstream 489982 28001397 ~ 28162620 (+)
tbc1d32 tbc1d32 coding upstream 901949 27673178 ~ 27750653 (+)
rfx6 rfx6,LOC102778618,LOC102305591,LOC102193265 coding downstream 16578 28669262 ~ 28689591 (+)
vgll2a vgll2,LOC102778318 coding downstream 88484 28741168 ~ 28748192 (+)
plg plg coding downstream 120641 28773325 ~ 28786818 (+)
LOC120547119 NA coding downstream 213529 28866213 ~ 28872603 (+)
gpr31 NA coding downstream 249692 28902376 ~ 28906380 (+)
G187918 NA non-coding upstream 107087 28472115 ~ 28545515 (+)
LOC120546306 NA non-coding upstream 148211 28500729 ~ 28504391 (+)
G187915 NA non-coding upstream 232340 28419992 ~ 28420262 (+)
G187906 NA non-coding upstream 274962 28365238 ~ 28377640 (+)
G187886 NA non-coding upstream 455916 28177401 ~ 28196686 (+)
G188057 NA non-coding downstream 226064 28878748 ~ 28880435 (+)
G188069 NA non-coding downstream 261718 28914402 ~ 28914798 (+)
G188091 NA non-coding downstream 278374 28931058 ~ 28944726 (+)
G188097 NA non-coding downstream 320915 28973599 ~ 28973911 (+)
G188100 NA non-coding downstream 324286 28976970 ~ 28977625 (+)
afdna afdn,LOC102779179 other upstream 3479 28539400 ~ 28649123 (+)
LOC120546215 LOC104930085 other upstream 1614374 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 1914799 26695430 ~ 26737803 (+)
G187574 NA other upstream 1967095 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 2200237 26438486 ~ 26452365 (+)
ttll2 ttll2 other downstream 220002 28872686 ~ 28883121 (+)
G188063 NA other downstream 233806 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 458274 29110958 ~ 29132700 (+)
G188167 ucn other downstream 481487 29134171 ~ 29136917 (+)
si:ch211-245h14.1 NA other downstream 640021 29292705 ~ 29312364 (+)

Expression


Co-expression Network