G193201


Basic Information

Item Value
gene id G193201
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 11763663 ~ 11808556 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU262357
tgttttttttttttttttAAAAGTCCATATGCTTTACTCTTGCACATCCATTAAATTGCTATTAGCTGGCAAAGGCGCTTGATGGCAGAAAGTAGAAAAGGATGGCGCTGGCCTGCATGCTGTAGTCCTCTGTCCGCACTACCAGTCCTGAGTCAAAGTGGCACTCTGAACTCTTATGAAAAATACTTCCCTGTGATCGATTGAGCCTGTCTGGCACAGCTGAAGCAGCCGAATAGTTCAAAATGAGTACAATTTCCACCCAGCTGGCACCCTCCACAGGCTCAGGCAAACACTCCCAAGTATTTGGAAGGATTTCAGCTTTGATTTGACCCAGGTCTGCGAGCGACTGAGGAGTTCTATCTGTATGTGCACGCTTACCGCCAAATTCATTAGAAACCAGAGTTCATAAAATACAGCTTTGTAGCTTTGGCCACAGCACTTTCACATCCATCACTTCTAATATGATTTAGAGGAATCTGATCCAGCCCTGCTTTAAaggaagttgttgttttttttagcttttttgtttttaagaaacTTAGGATTTTTAAAGCACATCTCCCCTCCACATACATCCGATAGCTTTGATGTTGCTTTTGATGTCTAGAGATGGCAAGACCTCGGTCATTGTGTCCCACATGCCAGAAACGAGTCAGCGCTGCCACTGCAGAATTATGCTCAGCGGAAATGTTCAGTAAGTTGGTCAGTCTTCATGAACTAAAAATGTTTGGAAAAATCCACTGATGTCACTGACTCCTTCTCCTCTTTTCAAAAGTTTACCCTCCGTAGAGCCTTTTAACTCTCCTCGTTTAATGCTCTACATATATCCACGTTCATTTACTGGCAGCAACCATGCCAGATGCTGATTCTAATCATATAAAAACACCTTTTCCTCCAACTACTCTTAAGTGGAGAAGGTGGAGATTAGATTTCCTCTTCATCAATGTGTGTTTTCCCCTAAACGCTATGaatccagactgatctcatgaagtggcgtaggTATGACACGctaattcgtatgccattattggcgtgttatcaagaggcatactcgctttttagcgtgttaatcaacgccgtttggcctccattgacttacattacctcgcgattgtgtgtgaatttacgccgtagcgagtagtatgaaagggcgaaaatccgcgtagggaggttggtcggggtggtggatgggtcaaacacaggactttcacccaggagacccggggatcgtgtcccgcgcgTCACGTTTcctttgtgtcccgcgtgtcacgtttcctaaactcaatcgttgcattcttcttttcctaaacccaacccgtccgctgtatacggcgctcaaaatgcgtacagataagacgtcacttggctttagaaagtggcgtgtatttAACGtccactgtatacagcgtagacatacacgcggatagctcaaaatgcgtacaggtaacacgccacttggcttaagaaagtgggcgtgtatgtttacgcaaagttaTGATGTCGGTTGTGGGCACGTCAGTAACTTCTTAAACCGGATGCTTAAATCCTCCTCACAGCTTTACTGGTGCCCCCGACTGGTGTGAATCGACAGTATGTGAGGTATCTGACGCTGCACTGACAGTTTTCACTcttaaagctgctgctgtttgtacTGTACATCTATCACACAACAGATCTGACTCCAATAGTATTTTAATATGTAAAATCCTTTCAAAGACCTCAGCTGCTCTGTATTGATCTCGTCCGTTGTTAATGAACCGACGGCGTCAGCCAAGAATCACAAACTGCACTCAGCCCGGCGTTTAATACAGATGATCAGTAAACGGCTCCAGTGTTTGGAAGGATTTCTTAAAGTATTTGACCTCGTGTCTGCAACAGAATTCCtcccctctcttctttcttcagTACTAGTCTACTATCATCATGATTATTAACATGAACAAGCATGAGATGCTTTTATTTATAaacagcaaacaaaaaaaaaatgggcaaACATGTACAAATATTTCAAAGTGTAATTGAGTTTTAATTTCATGTCCATGTCCATCTACTGTAGCTTTACAGCTGTGTGAGACATCTGTGGACAGCTGCCAGCTGTTCTCAGAGTGGGCCATGTTTCCCTGAAGCACTGTAATACTGAAGTCAGCTCTGCTCTCCGACATGTCAGCGGAGCAGAGGTGATGTTGATTCTGGGACAGTGTCAGGAAACACAGCAGATCGATCAAACAGCTTTTTTCTGTCCCTCAAGCTGTCAGGATGCAGTGCTGCTGGCCGGTAAGGCCGCGAGGATGTGAAAACAACATATTACCATCAACATGAAGCTGTTTTTTACACTGTACATCCTTAGTATTTTTACACATAAAATGTATATGATAGGGATGCACATTATTTTCCTTCTTACGGACAGCTTCAATAAAGAACTATGTCAATCTGCTGCGGTGGTGTCGACTTATTTGATTTGTCGCTGGAAATACTATTCATCTTCTGAACTTTCACCTcagttaaaatgttaaaaattaagaaaaaaaatgatcatAAAGCTCagcgatttttttttattaaatctgtaaaaaaaaaaaaaaaatgaaggtttaaaaaaaaaaaaacatcctagtACCTCAAACTGTTTCACATATCACAGTAAAAGTGTATTGcaaaatataaaatggaaaCCTGATTTTCAGTTCTGACAAAACATTTGTGAACATTGTATACAAGTGTATACAGTGTACCTTAATACAAAAAGGACGAGGAAGGAGGAACACACCTGCCTTCCtgggcaaaaaaacaacaacttaaaTAACAGTTTGATATGTTCTTGTCAACAGGAAATTTCTGACTTCAGCTCCAGATCCAAACAGGAAGGATAGACTCATGTGGACAGAGTATTGACTTGTCTctagaaagacacacacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262357 True 2926 lncRNA 0.42 2 11763663 11808556

Neighbor

gene id symbol gene type direction distance location
arid5b arid5b coding downstream 105560 11584571 ~ 11658103 (-)
cep170aa cep170 coding downstream 191045 11530590 ~ 11572618 (-)
dync2li1 dync2li1 coding downstream 239525 11518901 ~ 11524138 (-)
abcg8 abcg8 coding downstream 255957 11495070 ~ 11507706 (-)
ppm1ba ppm1b coding downstream 363146 11380833 ~ 11400517 (-)
atl2 LOC103370707 coding upstream 180811 11989367 ~ 12007678 (-)
olig3 olig3 coding upstream 249869 12058425 ~ 12060064 (-)
si:ch73-52p7.1 LOC104931135 coding upstream 270100 12078656 ~ 12083832 (-)
map3k21 LOC103372805,LOC104946551,LOC102290220,LOC102205779 coding upstream 309179 12117735 ~ 12141600 (-)
rgs17 LOC103372808,LOC101482424 coding upstream 373734 12182290 ~ 12203328 (-)
G193191 NA non-coding downstream 47804 11715173 ~ 11715859 (-)
G193149 NA non-coding downstream 155849 11599779 ~ 11607814 (-)
G193148 NA non-coding downstream 179503 11582258 ~ 11584160 (-)
LOC120547711 NA non-coding downstream 254730 11508195 ~ 11508933 (-)
G193117 NA non-coding downstream 325252 11437887 ~ 11438411 (-)
G193247 NA non-coding upstream 208033 12016589 ~ 12017133 (-)
G193248 NA non-coding upstream 208603 12017159 ~ 12017406 (-)
G193305 NA non-coding upstream 369053 12177609 ~ 12178477 (-)
G193306 NA non-coding upstream 371393 12179949 ~ 12180953 (-)
G193307 NA non-coding upstream 418552 12227108 ~ 12227308 (-)
lyrm7 lyrm7 other downstream 236379 11524906 ~ 11527284 (-)
camkmt camkmt other downstream 405991 11236314 ~ 11357672 (-)
LOC120548461 NA other downstream 800773 10956572 ~ 10962890 (-)
LOC120548128 LOC103374855 other downstream 809640 10890469 ~ 10954023 (-)
hhat hhat other downstream 1107953 10633244 ~ 10655710 (-)
adss2 adss,LOC107098117,LOC107375820 other upstream 79536 11888092 ~ 11918814 (-)
phactr2 phactr2 other upstream 488933 12297489 ~ 12348599 (-)
G193427 dnajc9 other upstream 1139139 12947695 ~ 12948609 (-)
mzt1 mzt1 other upstream 1897169 13705725 ~ 13707932 (-)
dhx32b LOC102782489,LOC102202651,LOC100703771,LOC101477466,LOC102310286 other upstream 2416112 14224668 ~ 14233001 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G175767 NA non-coding CI01000037 null 2302737 ~ 2303537 (+)
grasscarp (Ctenopharyngodon idella) G682460 NA non-coding CI01180000 null 9270567 ~ 9272900 (+)
striped catfish (Pangasianodon hypophthalmus) G50002 NA non-coding NC_047597.1 CM018543.1 20744419 ~ 20749478 (-)
bowfin (Amia calva) G158580 NA non-coding CM030143.1 CM030143.1 7312144 ~ 7313758 (+)
mexican tetra (Astyanax mexicanus) G43848 NA non-coding NC_035901.1 CM008304.1 19228154 ~ 19229887 (-)