adss2 (adss,LOC107098117,LOC107375820)


Basic Information

Item Value
gene id adss2
gene name adss,LOC107098117,LOC107375820
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 11888092 ~ 11918814 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU262400
TCTAACGTTGCTGTGGAAGCTCCTTCAGTCCTCTGACTCCTCTAGCTATCTttggtgcagcagcagcagcagcagcacggtgCGAAAGGCGCACAAGTGTAGTCAGCCAGCGACCCAGCAGAAATGTCGGAAAGAGGGAGTCAGGAACCTGCCGGGGCCGCAAACGGCAGCGACAGCCCGACAAAACAAGCACCCAGACCGCCAGTCGGCAACAGAGTGACCGTGGTTCTCGGGGCTCAATGGGGCGACGAGGGGAAAGGAAAAGTTGTGGATCTGCTCGCACAAGACGCGGATATGGTGTGCAGATGTCAGGGCGGCAACAACGCAGGACACACAGTGGTGGTCGACTCGGTGGAGTACGACTTTCACCTCCTCCCCAGCGGCATCATCAACCCCAAGGTCACTGCTTTCATTG
>XM_039784728.1
CGTGGCCGTGGTGTGTTACTTCCTCGCGTCTAACGTTGCTGTGGAAGCTCCTTCAGTCCTCTGACTCCTCTAGCTATCTttggtgcagcagcagcagcagcagcacggtgCGAAAGGCGCACAAGTGTAGTCAGCCAGCGACCCAGCAGAAATGTCGGAAAGAGGGAGTCAGGAACCTGCCGGGGCCGCAAACGGCAGCGACAGCCCGACAAAACAAGCACCCAGACCGCCAGTCGGCAACAGAGTGACCGTGGTTCTCGGGGCTCAATGGGGCGACGAGGGGAAAGGAAAAGTTGTGGATCTGCTCGCACAAGACGCGGATATGGTGTGCAGATGTCAGGGCGGCAACAACGCAGGACACACAGTGGTGGTCGACTCGGTGGAGTACGACTTTCACCTCCTCCCCAGCGGCATCATCAACCCCAAGGTCACTGCTTTCATTGttgtggtcaaAAGGCTGGGAAAGTTGATCATCTCAGACAGAGCACATATTGTGTTTGACTTCCACCAAGCAGTTGATGGTGTTCAGGAACAGCAGAGACAAGAGCAAGCAGGCAAGAACCTCGGGACAACAAAGAAGGGGATCGGTCCAGTGTACTCAGCCAAGGCAGCACGTAGCGGTCTCAGGATATGTGACCTGTTGGCTGACTTCACTCAGTTCTCTGAAAGGTATAAAGCTTTGGCCCAGCAGTACAAGGGTATGTACCCCACTCTGGAGATTGACATAGAGGGAGAGCTGATCAAATTAAAGaactaTGTGGAGCGGATCAAACACATGGTGAGAGACGGGGTGCACTACATGTACGAGGCTCTTCACGGCCCTCCTAAGAAGATCTTGGTGGAAGGAGCCAACGCAGCACTGCTGGACATTGACTTTGGGACGTACCCGTTTGTGACGTCGTCCAACTGCACGGTGGGCGGGGTGTGTACGGGTCTTGGCATGCCGCCTCAGAATGTCGGGGAGGTTTATGGGGTCGTCAAGGCCTACACCACCAGAGTTGGCATCGGAGCTTTCCCCTCAGAGCAGAGCAATGAGATCGGAGAGCTACTTCAGACTCGGGGGAAGGAGGTTGGCGTGACCACAGGCAGGAAAAGGCGATGTGGTTGGCTGGATCTGGTGCTTATCAAATATGCACACATGATTAATGGTTTCACTGCTTTAGCACTCACCAAACTGGACATACTTGACGTGTTTGCAGAGATCAAAGTGGGCGTATCGTACAAAGTCGACAACCAAACCATACCTTACTTTCCAGCCAATCAGGAGGTGTTGCAGCATGTGGAGGTCCAGTATGAGACGCTGCCGGGATGGAACAGCGACACCTCGGCTGCGAGAAGCTTTGAGGAGCTGCCTGAGAACGCCCAGAAATATGTCCACTTCATCGAGGGGCATGTTGGAGTGCCTGtCAAGTGGATCGGAGTGGGCAAGTCTCGGGAGTCCATGATCCAGCTGTTCTAAACGAAGGGAGGAGAAACacgagcaacacacacacacacacacacacacacacacacacacacacatacgcacgcacacgcCGTTAATGCTTTACCTCTGAATCATCAGACTGTCCCATGTTACAGACCGGACCTCTCTGGATCAGACTCCCATCAGACTGACCTCCATGAACCAATGGTTCCCAGCTTCTCCATCTGGATTTTTAACCGTTTTAAACTTTAGCATAACAGCTCCAGGGCAAAGTCCCCTCTTTTAATTTGTCCCTGTTCGTATTGTAACCGTTTATTCCAGACATACAACACACTCGGCAACACCAGCTGCCATCAGGTCTGAAAGATGACACGAGGGAAtggactcaacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacaaacacacaaacacacctgatCACTCCCCGGATGAACTGTCCACAGATGTTTGCTTGGTCAAACTTTTATTCAAGTGTATTTTTGTTAATCTATgctgtgttttaaatgtgctgtgCCAGTCTGGTGTAAATCAGTTTTAACCTCTGCACTTTAGATGCTTTGGGCTATGTTTTCTTGTGCCAGGCGTACACAACCTCCTGACATTATAAAGGGAtccttttaatatttttaacatgtctttttgtgtttgtttttttcgtcATCGGACAAAGACTTCTCATATTGCCTTGTCATTCTACCAAAACATTTgcttttaaatttcttttagcTAGCGACTGCTTCCACTGAACGCATCCCATACTGTGAGAAGGCTCGTGTTTTTCACTTTAACTTTGGCAGATGAGTTTTCCATGAACCAATACAGAGATTATAACTAGTGTAACTATCCTTTTTTCAAATGGAAATCAATTCACTAGGGGAGCATATTTCCACTCACATTCTCGTAATTGTTTATCTTATTATCGTTGATTTTCTTTGCACTCAGTATAATGCTCTGTTTAAGTGTAGAGGAAGGAAATTGGTAACAACTTTTGCACAAAGAAATGTGTAAATATGGATTGATAAATGCTGTATAAGACAGTTGTTCATCtttctcctttttgtttttgtccactCCTCTGCCATTGTTATAACACATGtctttaaaaccagaaaaataAGGCTTGAATAGAAAGTTGTGGGTTGCATTTTGCCTTCCGAAAGAAAAGCTGGTACTCTTTCCTGTTTCACCAATTCAATGGCACCATCCAAATAAGCCATTTAGTGCTACCTGCTGGTAAAAATGGTATTGCGTCTTATGATGCATTCATGCAATGTCAGCAAACTGGAAGAACAAGAAAATCTCCCATTACTCTGACTTGGGAGCGTTCATGCCATGTACATCATTTAAATAGCCTTAATAAGCTGCTTTTTCTGTGTTACGTACTTGTAGCAGTTTGTTAACAAGTGAAACCAGATACATATAAACTCTGTAGCTCCCTTTTAAATTTGCTGAATCCATTGTATTggtgttattgttttttatttagatGTGCCAGCAATTGTGTCTTTCCAGCCGTTTTGCTAAAGGTTCGATGGTGATATCCAACTTGGAATTACGACGACTCTTGCTGGTAAttacgttttatttatttatttatttattaaagcaGCAGAGGCCAAAATGTCCTGAGTTTAAGTCTATAGTTTGGAGTCAGGCTTCTCAAATTTCATTATGCCATGATTATGACGCCCTATGGGATGGAAGATAGAGACGGGAAAGATTCCCATGGAGGAGTCTTTTTGGCAAAGGATGATAAACACACTACGCTTGGATGTTGACGTGAACATTATTTTAAAGCCGGAAACTTTTTATTATTACGATAACGTCATGTGAATGTGGCATTAGACCAAACTTTAGaaagctcctccagagccacagaagacaatAAGCTGTTCAAATGCTCCTTTTACTactttgtgtaaaatgtttagCATGCTCCTTTTAATAAACAGCTCGTTCGATTGGAGGAGGAGAACCGAAAACCAAACAACTCTTGGTAAAGCTGAACAAGCTTTGGTGGAAGATAATCACCGATATTTCATAGACACACAGCTGTCATACCAAGTATACtttccactttaaaaaaacaatgtggtAGTTTGAAAGCCCCAGCAGATTCTTTAAAATATTCTATTTTCATTACCACAAGGATTATTTGTGATTGAATGTGttgctgtttttatgtcagataTTAGAAACTCAATGTGTTTTGTAGTGGCAGCAAGACCTTTGCACATTACACATTTCATTCAGCGTTTAATTCCACAACACAACTAAGTATAACATGACATGAATGGGTTTGATGGCAGCAATTTTGCATTGAGTATTTTGAAAGAAGCAGGGAGTCATCAAGTCAATTTTGCTGGAAAGCATTTAGTCAGATTATTGATATGTAACTTTGGTAAAAACCTCATGTGTTTTTCTCTGGTGACCTAAAATGACCACTCAGTCTGAAACATTTTTCTCAGGACATTGATTATAAATGTAATAACTCTTGATGCTAGTTTTATCTTGTTTGTAACTGCTGAAACCAGTGGGGCAAAACCACATGTATCATTTTCTAAATCCTGAACAATGGTTTTGCAAAGCAGCTCCTATCGATAAAGAAAGCAAGTCATTCTCATTATGTACTGATTCATTTACACACGGTTGCTCCTGTCTGCCTCCCTACTGGGGGTTAAAAGGGAAACCGTAACCAGGATCATTCAGTCATGTACTGTATCTCCATCTGCTCTACTGAAAAGTGTGTTCGTTTGGTATCTGTGACCCTGTATCTCCTTGTTTCAGCAGAACTGTATCTGTTCTCTTTGCTGTGTTATAATGAACATTTACTCCTTTACATGCTCACACTGCCAACTTTTCACTGAATGCCCTTTCACAACCTGAAAATCTGCAGTGTccatttctgtctttcttttcttttctttcctttttatgtTGAACATGTCCCATTGACTTTTTCAGTGCAGACTTGTACCTTGACATCTGGTTAAGACTAAATGAATGTTTTTGGCTAAGTACGcacaatacacaaattaaaGCGCTCAACACATAA

Function

symbol description
adss Enables adenylosuccinate synthase activity. Involved in several processes, including IMP metabolic process; aspartate metabolic process; and cellular response to electrical stimulus. Predicted to be located in mitochondrion. Predicted to be active in cytoplasm. Biomarker of sarcoma. Orthologous to human ADSS2 (adenylosuccinate synthase 2).

NR:

description
adenylosuccinate synthetase isozyme 2

GO:

id name namespace
GO:0044208 'de novo' AMP biosynthetic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0005525 GTP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0004019 adenylosuccinate synthase activity molecular_function

KEGG:

id description
K01939 purA, ADSS; adenylosuccinate synthase

RNA

RNA id representative length rna type GC content exon number start site end site
TU262400 False 415 TUCP 0.58 2 11904092 11918786
XM_039784728.1 True 4535 mRNA 0.43 12 11888092 11918814

Neighbor

gene id symbol gene type direction distance location
akt3a akt3,LOC108244154,LOC107099926,LOC104931217,LOC100691860,LOC105927955 coding downstream 54022 11769396 ~ 11834070 (-)
arid5b arid5b coding downstream 229989 11584571 ~ 11658103 (-)
cep170aa cep170 coding downstream 315474 11530590 ~ 11572618 (-)
dync2li1 dync2li1 coding downstream 363954 11518901 ~ 11524138 (-)
abcg8 abcg8 coding downstream 380386 11495070 ~ 11507706 (-)
atl2 LOC103370707 coding upstream 70553 11989367 ~ 12007678 (-)
olig3 olig3 coding upstream 139611 12058425 ~ 12060064 (-)
si:ch73-52p7.1 LOC104931135 coding upstream 159842 12078656 ~ 12083832 (-)
map3k21 LOC103372805,LOC104946551,LOC102290220,LOC102205779 coding upstream 198921 12117735 ~ 12141600 (-)
rgs17 LOC103372808,LOC101482424 coding upstream 263476 12182290 ~ 12203328 (-)
G193205 NA non-coding downstream 20294 11793674 ~ 11867798 (-)
G193201 NA non-coding downstream 79536 11763663 ~ 11808556 (-)
G193191 NA non-coding downstream 172233 11715173 ~ 11715859 (-)
G193149 NA non-coding downstream 280278 11599779 ~ 11607814 (-)
G193148 NA non-coding downstream 303932 11582258 ~ 11584160 (-)
G193247 NA non-coding upstream 97775 12016589 ~ 12017133 (-)
G193248 NA non-coding upstream 98345 12017159 ~ 12017406 (-)
G193305 NA non-coding upstream 258795 12177609 ~ 12178477 (-)
G193306 NA non-coding upstream 261135 12179949 ~ 12180953 (-)
G193307 NA non-coding upstream 308294 12227108 ~ 12227308 (-)
lyrm7 lyrm7 other downstream 360808 11524906 ~ 11527284 (-)
camkmt camkmt other downstream 530420 11236314 ~ 11357672 (-)
LOC120548461 NA other downstream 925202 10956572 ~ 10962890 (-)
LOC120548128 LOC103374855 other downstream 934069 10890469 ~ 10954023 (-)
hhat hhat other downstream 1232382 10633244 ~ 10655710 (-)
phactr2 phactr2 other upstream 378675 12297489 ~ 12348599 (-)
G193427 dnajc9 other upstream 1028881 12947695 ~ 12948609 (-)
mzt1 mzt1 other upstream 1786911 13705725 ~ 13707932 (-)
dhx32b LOC102782489,LOC102202651,LOC100703771,LOC101477466,LOC102310286 other upstream 2305854 14224668 ~ 14233001 (-)
LOC120548283 NA other upstream 2527419 14446233 ~ 14447528 (-)

Expression


Co-expression Network