G195511


Basic Information

Item Value
gene id G195511
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 20645310 ~ 20658889 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU265464
TTCATGTTTTAGTTTTATTCTTTGCTGCAAATGCATTGGTTTGTATCCCTGTGATACAGCAGTAATCAGGATCCCAGTGTGCATATTCATAAAACCACAGAATTCCTCTTTCAGGAACCCAAAGACATTCTGTACATCCAACAAACCTATAGGGCATTTTAATCAACCACTCACTTCTGATTCTATTCCACAGCACTCTCTAATGCATAAATtacactctctcactctgtaAATTAACACAACAATAgacattttcacacacacacacacacacacacactttctctctctcacacacacacacacacacacaatcccccGATTCATCACTCCTTTGCTTGCAATTAATCGACACAAGGTGAAGCATAGATATGGAGTACAGGCAATAAATGCACTGCCTTCTGGAGTGAGGCATTGGAGCCAATTCACTATTTTCACAAAGTCTGAGCTAGCCTGCTGGATTAGGCTGTGATGTAGCATTGCCCATTGAACACATCAGGGCGTGAGCTGAGGCTGTGCTCCTAGGCTATGTAAAGTCCAGCCTCCGGATCAAGTTTAACCTCGATTTTGGCTTTTAGCGCAGTGTCATGGGCATCTCTCTTGCTTCACCAAACAGGCTTCCGTTTTATGATAAATGTTCTCTCTCTTCACGTGCACCTCTCTCTGTTGGTCCTCACTTTGTCCTTCATGCCCCATTGCTGTCATATGATCTTTATTAGTTTAGCTGGAGATTGACAGAAGTCCATGTTCATCAGCAGTGTCAAGAATCCTGCATATAACCGGAGACTCAacctaggaaaaaaaaaaaaaacgtcag
>TU265465
TTCATGTTTTAGTTTTATTCTTTGCTGCAAATGCATTGGTTTGTATCCCTGTGATACAGCAGTAATCAGGATCCCAGTGTGCATATTCATAAAACCACAGAATTCCTCTTTCAGGAACCCAAAGACATTCTGTACATCCAACAAACCTATAGGGCATTTTAATCAACCACTCACTTCTGATTCTATTCCACAGCACTCTCTAATGCATAAATtacactctctcactctgtaAATTAACACAACAATAgacattttcacacacacacacacacacacacactttctctctctcacacacacacacacacacacatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265464 True 817 lncRNA 0.42 2 20645310 20646155
TU265465 False 390 lncRNA 0.41 2 20645310 20658889

Neighbor

gene id symbol gene type direction distance location
gpr75 gpr75 coding upstream 140 20640833 ~ 20645170 (+)
psme4a psme4 coding upstream 4943 20605868 ~ 20640367 (+)
map3k4 map3k4 coding upstream 139518 20482256 ~ 20505792 (+)
LOC120548163 NA coding upstream 234381 20407344 ~ 20410929 (+)
tarbp1 tarbp1 coding upstream 238140 20393063 ~ 20407170 (+)
LOC120547712 nrxn1,LOC102793382,LOC103356500 coding downstream 180698 20839587 ~ 21105300 (+)
lhcgr LOC103358126 coding downstream 572139 21231028 ~ 21247385 (+)
golga4 NA coding downstream 738183 21397072 ~ 21422113 (+)
itga9 itga9 coding downstream 764877 21423766 ~ 21474056 (+)
LOC120547989 LOC104967820,LOC107989005 coding downstream 820572 21479461 ~ 21482598 (+)
G195361 lmbrd1 non-coding upstream 467673 20176520 ~ 20177637 (+)
G195285 NA non-coding upstream 876993 19768074 ~ 19768317 (+)
LOC120548551 NA non-coding upstream 1284094 19358047 ~ 19361216 (+)
G195115 gclc non-coding upstream 1370088 19272600 ~ 19275222 (+)
G195087 NA non-coding upstream 1426268 19218736 ~ 19219042 (+)
G195520 NA non-coding downstream 111005 20769894 ~ 20770215 (+)
G195565 NA non-coding downstream 606396 21265285 ~ 21265663 (+)
G195570 NA non-coding downstream 619958 21278847 ~ 21280312 (+)
G195575 foxn2 non-coding downstream 626542 21285431 ~ 21289210 (+)
G195577 NA non-coding downstream 632624 21291513 ~ 21291741 (+)
G195448 thbs2 other upstream 114995 20529767 ~ 20530315 (+)
adgrb3 adgrb3 other upstream 488362 20041774 ~ 20156948 (+)
gfral NA other upstream 1215214 19426475 ~ 19430096 (+)
zgc:163080 tmem14a other upstream 1428887 19212832 ~ 19216423 (+)
mcph1 mcph1,LOC102776803 other upstream 1445305 19167986 ~ 19200005 (+)
G195518 NA other downstream 93884 20752773 ~ 20753809 (+)
fbxo11a fbxo11,LOC104951339 other downstream 659721 21318610 ~ 21332577 (+)
G195653 LOC102296834 other downstream 855637 21514526 ~ 21515128 (+)
kif16bb NA other downstream 1496513 22155402 ~ 22184492 (+)
tasp1 tasp1 other downstream 1989025 22647914 ~ 22692604 (+)

Expression


Co-expression Network