G195575 (foxn2)


Basic Information

Item Value
gene id G195575
gene name foxn2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 21285431 ~ 21289210 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU265555
tttttattaatattttgtaaTACCATATATAATGCAATTGCATATCTTTGGCGAAAATAAATCTTATAAACATTTTATCAACAGAGGTTAGCATACAAAACCAAAAGGTGTGTCGGTCCAATAGACATGGCAGACAACTGACACAAACTGATACTGGGTTGGCAGCTTTGTCAAATGCAACTAAATGTTCATCATACCCTTAGGAACTGCAACAGAATTTAGAGAATCACATAATCAATATTCAATAACAGCTGTTGAGCAATGAAGCAACTGGGTTTTGAGTTGGATCCCAAAATGTTTAGGTAGCTCATCCACAGATTTGACTCAGTGTCACTTTGAGACCAACTTAATGTTTCTTTTGGAAGTGCTACAAAAAGAATGAGTGAGCTTTTCCTCTACAAGTCTCTCCATAATTTCTCTGCAGTTGTGTCTCTATACTTACAGTAAATGTAGGTCTGAAACTACACAGCAGCAGCCTGGGGACTTTGTGAGTCTGATCAAGTTTTACTGATATTCTAAACATTTCAACATCCCATAAAAATACCTGGAAGCATGAGTTATGAGtggcagtatttttttttaaaattctaATCTGTGATGAGATCGAGAGCTTATCTTCAATTTGTGACTACTTAGTCATAATATCTAAACATAAACATgagacaaatgtaaaaaaaaaaaaaaaaaaaaaatcaaatcacttCTACAGTACATGGGGATTGTGTCCATCTTAAATGTTATACCCCAGCTGTACATCAATTTTGGCAACAAAAGGTTTCAGGATCAATGTTAATAAACTACCCAGCCtaacaaaaaagcaaaacaaaaacatcaagaAAACCTGGCAGTCATGGttaaattgaagaaaaaaaaaaaacgcacccGCTCTAAAGACAATAGACATTGGCAAAATACTTAATCACCATAAGgtagtgaaagaaaaaaaggtgtattgctgtaaaaaaataaaatgagataAACAAAATACTTAAGGAGTTCACAGAGGGAGAAAATAAATGTGCCTAGTCACGTGTTTCAAATGACCAGTGTTTGATAGAGTATGCATTCAATAATCCCATAAATTAATGTCATAAATAAGGTGATGATTaatgaacaataatttgttctttTTTCACAGCTAAACAAGACCAGTGTATGCAAGTATTACTTCTGAGAACTGCAGTTTACTCTGCTTAGAGCAGTTCCCACtctaaagtgacaaaaagaaaCCAAACTATTGGTTAAGTCACTGTACTGACCAAAGGCCTATCCCATTTCCTGTTCGGATGATTCAGAAAACTAGGGCATTGTTACTCTTAATCACAACTGCGTTGTGGCAGCAGGGGAATATAGCGACCATGGTGCTTTGCAGTTTTACATCAGTGGCACAAGAACATGTTTGGCACTGACCATGCATGCTATACTAACAATCACTGTGACAACGTGATCTGGTActgtgggaagaaaaaaaatcaattttcagTGTGTTACCCTTGTGGGCTTCCATGCCACCTTGTATTGTACACAGCGTGTTTGcagctttttttaaaagctcaaATGAGAATTGTGGCCTTTTACACAAGCAACTTCCCCTCAGTGAACTGCATGCAATCAACTGACAGTAAACACTCCATTTCACAGCTTGAGAAGAGAGTGTGCACTTCCTTATTTTGTTCTAAGAGGAAGAGCAAAGACCAAACACTTGTGGGCCAGCCAGAACTGAAGGCACAACTCGAGAGCAGCACAGGTCTTCAACATCTCGCCTGCGAGTGACTGCACATACAAAGTCCAGTTCTATCTGGCCATGACTATAATTGTCCCCTTCTTGTTCTTTGCACTTGAATATGCATTATGATCTgcatctttcatttatttaaaccagaaCAGACACACCCTCCCTCAAGTTGAGAATTAGCTTTGCCACAGGATCAGCAAACTTAATTTCTAATTTTCTAAAGTacatggttaaaaaaacaagacaaggAGAACACACGGAGGTGTAATCAAACTGAAAGCCCAAATAATGGAGCGAGTAGCTGTGGTAATTTATAGTCCTCTCCGGTTTCTGACTATTGACCAGCTCTGCGTTCAAAAGGACCAGAAGCCACCAGAGTACCAAGCAGCCCTACAATACAGCTGTAGCAAGGAGATCCATCATTACACCAATCCCATTCATTGGAGCAGTAGGACTACATTGTcagtagaaaaaaaattgtttgagCATGTCAAACTCTTTTCTGTCTTGACCGTCATCTCAGGTTTAGGCTGAAGTCGACATGCActatgatacacacacacacatacaaaataaaaaataaaatctatggGGGATAACCTATGAACACACAGTGAACATCTGGCAGCACGTGGCAGATGTTCACTTTGCGTAGGCTGTCACCAAACGTGAATATATGTTTGCACAATAAttgtcaaaaacacactgatGAATGAAAGGGATTGACAGAATGAGCATTGGATTTGtgaaaaaagatgaaaacagCTTTCATTTGTATAGCACTGTAATGGCCGCACAAGACTAAGCGAAGTAGTATAGCTAACTTTGCAACTAAATTTGGCAGTGGGAGAGTAATACTATTTCCACATCTTGCTAATCCTGAAATAGAGCCAGAGCTCATGTGTAAGAAGTTTATCGCATTACAAGATCATGGTACTACTCCATTCATTCTCTTAATTGTAAAGTTTAACTAGCATACTCAACTCTGAAAAATGCCCCcatgaaataaagtaaaaaaaaaaaaagttaaggtTGTGGATTAATTATTGCATCTCTCTTACAAGAGGATTCATAGAGCAAGAATTCCTTTCAAAACAgtggcttttttcttttctttctttagcaCTAAGAGGAGAAACTGATAACACCAGGAGGTTAGGTTTTGTCTGTTACAAACATGCACTCATTCGCTTCATAAATAGATTCACTTGGAAGAGGATACAGGTTTGAGGAGGAAGCATGCAACGCTTTGAGTTATAAAACCTTCAGCTTTTCCTGTTTTGTCTTTCAGAATAAAATTCTTGAATCACAATCTTCTAATCCAATAGAAGCAGGCAGGTCATTTTGGAAAGGTTTCTTGATGGTTCTCCATAGCCCAAACCCAGCCCCAGCAGTCACCCCCGAGTTACAAAAGTCTCTATATGGCTTTGTTCTCCTGTGTGAACGATACTATTGCCATTTGTTTTGTTGGACAGGGATAATCCCAAACAAAAAAGGCTCAAAATGGCCAATGAACGATCAGATAAGGAGAAGGAGGCACACTGGGACACACGATCAGGGGTCATAGGTTAGGGTTCACAGGGTCCGGAGTctgattgggggggggggcaggcaAAAATAATCTTCATTTCCTGTTAAGTTTTGTGCTCTTGACAGTGCGTTTGGAGCCCTCTGTGCAGCTGCGTATACCAGCGAGGTGCAGCAAGGAGCCAGCGGCTTCCTTTAGCTCCTCATCCAGCTCTGGCTTCACCTCGCGTCGTGCCCTCTTACCGGCGGGCCACTTGATGGCGGGCGGACGTCGAGACGTCGTCTGGTGGACGCCCCTCTCGTCCCAGAGGTCGGAGTCCTCGTCACTGTGGAAGCCCTCGCTGCCGGCGCGGTGGGACTGCCTGCGGTCGCAGCCTCCTTCGTCCAGGGAGGAAAGAGACGAAGAGGAGGAGCGGGAGGAGCAGCGCTGCAGGGCTACGCTGCTGTAGTTGTGGTCCTGCTTTGGATCACTGCTCACCAGGACCGAGTCGGGTCGGGAGAGGTCCAGCGGGCTGTCA

Function

symbol description
foxn2 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to act upstream of or within skeletal muscle cell differentiation. Located in nucleoplasm.

NR:

description
PREDICTED: forkhead box protein N2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265555 True 3780 lncRNA 0.41 1 21285431 21289210

Neighbor

gene id symbol gene type direction distance location
lhcgr LOC103358126 coding upstream 38046 21231028 ~ 21247385 (+)
LOC120547712 nrxn1,LOC102793382,LOC103356500 coding upstream 180131 20839587 ~ 21105300 (+)
gpr75 gpr75 coding upstream 640261 20640833 ~ 20645170 (+)
psme4a psme4 coding upstream 645064 20605868 ~ 20640367 (+)
map3k4 map3k4 coding upstream 779639 20482256 ~ 20505792 (+)
golga4 NA coding downstream 107862 21397072 ~ 21422113 (+)
itga9 itga9 coding downstream 134556 21423766 ~ 21474056 (+)
LOC120547989 LOC104967820,LOC107989005 coding downstream 190251 21479461 ~ 21482598 (+)
LOC120547990 fbln7 coding downstream 203509 21492719 ~ 21506947 (+)
sft2d1 sft2d1 coding downstream 245733 21534943 ~ 21545927 (+)
G195570 NA non-coding upstream 5119 21278847 ~ 21280312 (+)
G195565 NA non-coding upstream 19768 21265285 ~ 21265663 (+)
G195520 NA non-coding upstream 515216 20769894 ~ 20770215 (+)
G195511 NA non-coding upstream 626542 20645310 ~ 20658889 (+)
G195361 lmbrd1 non-coding upstream 1107794 20176520 ~ 20177637 (+)
G195577 NA non-coding downstream 2303 21291513 ~ 21291741 (+)
G195578 NA non-coding downstream 2631 21291841 ~ 21292116 (+)
G195634 zc3h6,LOC100704674,LOC102799538 non-coding downstream 197893 21487103 ~ 21487648 (+)
G195648 tmem87b non-coding downstream 223530 21512740 ~ 21514404 (+)
G195654 NA non-coding downstream 226548 21515758 ~ 21516441 (+)
G195518 NA other upstream 531622 20752773 ~ 20753809 (+)
G195448 thbs2 other upstream 755116 20529767 ~ 20530315 (+)
adgrb3 adgrb3 other upstream 1128483 20041774 ~ 20156948 (+)
gfral NA other upstream 1855335 19426475 ~ 19430096 (+)
zgc:163080 tmem14a other upstream 2069008 19212832 ~ 19216423 (+)
fbxo11a fbxo11,LOC104951339 other downstream 29400 21318610 ~ 21332577 (+)
G195653 LOC102296834 other downstream 225316 21514526 ~ 21515128 (+)
kif16bb NA other downstream 866192 22155402 ~ 22184492 (+)
tasp1 tasp1 other downstream 1358704 22647914 ~ 22692604 (+)
disc1 disc1 other downstream 2273073 23562283 ~ 23611337 (+)

Expression


Co-expression Network