G195968


Basic Information

Item Value
gene id G195968
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 22922776 ~ 22924662 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU266079
aaaaagcaaaaaaaaactgggggaaaaaaggttgacgggaagacaacacaagggtttaaaCAAAAGGTTGAgagattgcttttttttttttcatgggagAAACAAATTTATTTATATCATAAAATGTCTTTCCAgtccaacaaaaataaaatcgcGAGTAATGTATTCAGGCAACATTATGTCATCAAGTGGAACATCTTGGGCTTTACATGGGGGTATGAGTGACTGTTGGCCGCTAGTTGCCCTATGCTCTCTGGATCGCTCAACTGGCCCTGGTCCAAACAGCCCTGTCGAGTGTTGGGGCGACGACAGCAGCTACATTTTAACCTGTGATACTGTAGACGTCCTGCTACTCCCAAATAAAACCACTAATAATTCAATACTGCTCATAAACCCACACATATTTGGTTCAagttcaaaataaaatctgcatAATACCCTCAAATTTAAAGATACATTTCAGGTGCTTAGCAACTTATTATTGAGCAAATTGTATATGAATGAAATCTAACTACATAAGTACATTTTTGAGACTGGGGTGATGAAATAAATCTGGAAACGGCAATCAATCACACCAGAGCTTCAGCGGGGAAACTGGACAGTTTTCAGACACGTAGGAGCCAGTATTTCAGACTGAAAGCCATGACGTACTGCATGGCTCCTGCCTGTCTGAAATCCCCAATCTTTAACACAAAACCAAATCTAAACTCCAATTAAAGGTTTTTGACTTTCATTTGCGAGCCTCTCTTTGACCACCACTACTTATGGGTGGAGGCAAAGTCTGTTTCAAGTATTTGACAAAGCGTAACTCAAATGCTCATGTATCAATTGCCATAATGTGTTCAGCATTTGATCTGTgaatgtgtaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtAATAGATATTATATAGATAGTAAAATGTGACACGTGTACAAATGCATGTCATGTGAGGAAAACATGTAGCCTGACACAATATCATCTCTATCTCTGTGGCGTCAGGCATCTTTACTGTAGCTCGTCTCTCCCCCTCAGGACCTCTTCAGTCGTCGTAATCTAGAGGTTCTGGGCACATTTTCACTCCCCTCCTCTCCGAGTGTGGATCTGGAACTAATAGAGGAGCCTGAGGATGCAGGCTTGACAGATAGGCCCCTCAGACTTGCGGCCGGGCTGTTTTGGTTTGTCTGTGCCGTGTTATTGCTTGTGAGGGGGAGCCTCTGGGCCCGTTTCCCTGGAGTAAGCAGCTCTACTTCCAGTGTGGTTTTCTTGCGCTCGGAGACAGGGAAAGCCTTGGACTCTGCCTTGGCTTCGACTAGAGGAAGGGGCGGCAGAGGAAGAAGGTCATGCCTGGATGTTTGTGTGGAGCACTCGGTGGATTGGGTTTGCATTGTGGCTGGAGGTCTTCCAAGGCACGTCCTCTTGGCCCTCTGTGGGCGAGGGTCTTCCCCTGCGTCGCTCGACTTGCACCTCTTGCTCTTTCTTGTCTCATGACTGATTTCATGTTGGCAGAAAACTACTGAGGCCCCATTTGGGATGATGCTGTCTGGAGGACTGTTCTCAGTCTGCTGCTCCTGGGTCAGACCCTGCTTTTGAGTAGTCCCAATCTGAGCCACGGCTTCATTTAAAGTACCGGGGCAAGGCACCGTGTGGTCTGCCTCTGGGAGAGCCTTCCATCCAGAGCTGAATTCTGACTCTCCGGCTTTAAGTTCCCCTCTTTGGTTTTTGGGACAGGCGCTCTGGTCCATCTGCTGCTCCCCCATACTGGAAACATAGAGCTCTTGCTGGACACTAGCTTGTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266079 True 1801 lncRNA 0.46 2 22922776 22924662

Neighbor

gene id symbol gene type direction distance location
jag1b jag1,LOC102209890 coding upstream 2464 22894831 ~ 22920312 (+)
flrt3 flrt3 coding upstream 359072 22553006 ~ 22563704 (+)
ephx5 ephx1,LOC103358491,LOC102206915 coding upstream 769450 22149948 ~ 22153326 (+)
mgme1 mgme1,LOC102788050 coding upstream 789256 22131121 ~ 22133520 (+)
cfl1l NA coding upstream 820909 22099306 ~ 22101867 (+)
mkks mkks coding downstream 34647 22959309 ~ 22963954 (+)
spast spast,LOC103374668 coding downstream 53490 22978152 ~ 22982603 (+)
LOC120547567 LOC104953149,LOC103387627,LOC103374175 coding downstream 77342 23002004 ~ 23009219 (+)
vit vit coding downstream 86727 23011389 ~ 23032132 (+)
gpatch11 gpatch11,LOC102790129,LOC102788696 coding downstream 156317 23080979 ~ 23083906 (+)
G195964 NA non-coding upstream 877 22921175 ~ 22921899 (+)
G195965 NA non-coding upstream 1767 22854538 ~ 22921009 (+)
LOC120547852 NA non-coding upstream 156123 22723027 ~ 22766653 (+)
G195941 NA non-coding upstream 213203 22708936 ~ 22709573 (+)
G195915 NA non-coding upstream 281852 22635738 ~ 22640924 (+)
G195973 NA non-coding downstream 39305 22963967 ~ 22964130 (+)
G196016 NA non-coding downstream 65022 22989684 ~ 22989890 (+)
G196017 NA non-coding downstream 65771 22990433 ~ 22990702 (+)
G196028 NA non-coding downstream 107790 23032452 ~ 23034791 (+)
G196036 NA non-coding downstream 211784 23136446 ~ 23144652 (+)
tasp1 tasp1 other upstream 230172 22647914 ~ 22692604 (+)
kif16bb NA other upstream 738284 22155402 ~ 22184492 (+)
G195653 LOC102296834 other upstream 1407648 21514526 ~ 21515128 (+)
fbxo11a fbxo11,LOC104951339 other upstream 1590199 21318610 ~ 21332577 (+)
G195518 NA other upstream 2168967 20752773 ~ 20753809 (+)
disc1 disc1 other downstream 637621 23562283 ~ 23611337 (+)
klhdc3 klhdc3 other downstream 894252 23818914 ~ 23851605 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other downstream 1433264 24357926 ~ 24367599 (+)
LOC120548495 ate1 other downstream 1443292 24367954 ~ 24426502 (+)
G196439 wdr11 other downstream 1639888 24564550 ~ 24569167 (+)

Expression


Co-expression Network