G196036


Basic Information

Item Value
gene id G196036
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 23136446 ~ 23144652 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU266188
ccaagacccgcccttcaatagcattcacacactactattggccaggcgtccatgcttacatgtacagatCCTATCCcatgaccaatcccctaaccctaaccttaaccactcgaggtgaaatgccgaACCCCAACCAATTGAGCTGCTTCATAGGGCGGGTctgggcgtggccatagtgggattcgtaatttttctcccgaccatgtgaacgccaATGTATATGTCAATGACGGGGGCGGTCCCTgatattcccaggtggcatgaacgcagcattactGGGGGTAAAGGGCAAGGCTTGCGCCCAGACGTAGCAAATTTATGGAAGCAGAGTTTAGATGAAAACAGAAATTGGTAGTCTGAGATTAGcactttattttcttcattCTAACATTCCGACTGTTGAGTAATGGACGTTACTAAACTGTACGAGTATGCACTGGACTGAAGATTGGAGCTGAAATATGAGGACGTCGGATCTGTTGGCCTTGCTCACAGTAAAACATTTACCGTAAGAGCAGTCCTGGATGGTAAGGTGTATCCTGATGGCGTGGGGAAGAACAAGAAGGAAGCCAAACAGAACGCAGCTAAAAATGCCCTGAGGGGCTTGTTGGAGGAACCAATTCATCCTACAGAAAATGCAGCAGAAGCTCCTTCTGCATCAGCTCATCTGACAAGTGGGAAATCAAGGAAAGAAGCTAAGGAGGAAGCAGCCAAGCTTGTACATCATGAGATATTTGGCAGTATAACTACAGAGCCTGGAGAGGAGAAATACAGATGTGCATCAAGTCAACCAGAGGAGGAATTGGATCAAAATGAGTCGGACATCTGTGAAAAGACAAAGAGCTTGAGCGTGATAACCAAAGACGAAGGTTTTACAGAGGCAAATTTCATAGGACTCGTCGACCAGTACTGTGCCAAAACAAACCTCATCCGTAACTACATCTTAGAAAACAAGTGTGGTTCACCTCATAACCTTCAGAGTACCCTGTGGGTGAGGGTAAGAGTGCCAAGGAAGCCAAACAAAATGCAGCCAAGCTGGCCTGGTCTGCTCTTCAAGAACAGACAGACTGGGACAGCAAGCCTGAAAACATACTGTTTGGACTGGATGGAGAAGTGAAGATTGGGGACTTTGGTCTGGTCACCAGAGATGATGAGGATGACTCTGCTTTGATggacagaacagagaacagaggaacCCCATCTTACATGGCTCCTGAACAAaggaagaagaactATGACCGAAAAGTGGATATATTTGCTCTGGGCTTAATATATTTGGAACTTCTTTGGAAAGTCTATACTGGCCACGAAAGACGAGTGGTTTTGGATGACGCTAGATGTCAGAAGCTTCCCAAAGACTTTTCCCCAAGAGAATAATATCATCGAGTTAATGCTGCGTATGAAGCCAGAAGACCGACCTGATGCCAGTAAACTGAAGGCAGAGCTGGAGAAGTGGGCTCAGACATTCAGCACAAAAAATGTGCATCAGGAAAATGCAACTGTCTGATTATCACAAGCAATTGTGACAAGTCTTAAGAGCATAAGGAAATATGTATTTTCTGATGTCTGTGTTTTAATCAAATGATTTGATACGCTGTGTTAATATCATGTTAAATATATTTGTAGAAAAATGGTTAATGTACTGCacttatatagcgctttactcAGGAATTTAACTCACACTCCTATGGCAATGGGTGGCAACTTGGGGTTCTAGGTTTTGCTCAAAGACACTTCAACATGCAGACAGGAGGACAAATCATTAACCATGCAAATGATGAACAGGATTTGAAGAAGAGGGCATAACATTATGGGTTTTATAATCAGGGAATGAAACAGGATATCAAATTTGATCATGATTTTAAAAAGTAACTTTTACATTAATTCACATCTGTCCAGCTGTACTTTGAAATAATCATAATACTGTATTCATGATATAATAATCACGTGCCAGTAATTTCTGTGTCCAACGTTGACATTTTATTCTATGCTGGAAATGGttaaatgtattaaagtggTGTCACAATA

Function

GO:

id name namespace
GO:0043570 maintenance of DNA repeat elements biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:0033554 cellular response to stress biological_process
GO:0006259 DNA metabolic process biological_process

KEGG:

id description
ko03440 Homologous recombination

RNA

RNA id representative length rna type GC content exon number start site end site
TU266188 True 2028 lncRNA 0.43 10 23136446 23144652

Neighbor

gene id symbol gene type direction distance location
LOC120547578 NA coding upstream 10348 23112659 ~ 23126098 (+)
LOC120547579 NA coding upstream 25875 23099915 ~ 23110571 (+)
LOC120547580 NA coding upstream 42206 23084932 ~ 23094240 (+)
gpatch11 gpatch11,LOC102790129,LOC102788696 coding upstream 52540 23080979 ~ 23083906 (+)
vit vit coding upstream 104314 23011389 ~ 23032132 (+)
LOC120547586 ggps1,LOC102790345 coding downstream 158552 23303204 ~ 23319036 (+)
LOC120547587 ggps1,LOC102790345 coding downstream 192729 23337381 ~ 23351721 (+)
gpr137ba gpr137b,LOC104924458,LOC103372484 coding downstream 343582 23488234 ~ 23494167 (+)
tsnax tsnax coding downstream 404488 23549140 ~ 23557843 (+)
map10 NA coding downstream 617756 23762408 ~ 23765382 (+)
G196028 NA non-coding upstream 101655 23032452 ~ 23034791 (+)
G196017 NA non-coding upstream 145744 22990433 ~ 22990702 (+)
G196016 NA non-coding upstream 146556 22989684 ~ 22989890 (+)
G195973 NA non-coding upstream 172316 22963967 ~ 22964130 (+)
G195968 NA non-coding upstream 211784 22922776 ~ 22924662 (+)
G196057 NA non-coding downstream 2160 23146812 ~ 23147635 (+)
G196111 NA non-coding downstream 44948 23189600 ~ 23190156 (+)
G196124 NA non-coding downstream 113484 23258136 ~ 23261055 (+)
G196140 NA non-coding downstream 209320 23353972 ~ 23354341 (+)
G196174 NA non-coding downstream 322642 23467294 ~ 23470444 (+)
tasp1 tasp1 other upstream 443842 22647914 ~ 22692604 (+)
kif16bb NA other upstream 951954 22155402 ~ 22184492 (+)
G195653 LOC102296834 other upstream 1621318 21514526 ~ 21515128 (+)
fbxo11a fbxo11,LOC104951339 other upstream 1803869 21318610 ~ 21332577 (+)
G195518 NA other upstream 2382637 20752773 ~ 20753809 (+)
disc1 disc1 other downstream 417631 23562283 ~ 23611337 (+)
klhdc3 klhdc3 other downstream 674262 23818914 ~ 23851605 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other downstream 1213274 24357926 ~ 24367599 (+)
LOC120548495 ate1 other downstream 1223302 24367954 ~ 24426502 (+)
G196439 wdr11 other downstream 1419898 24564550 ~ 24569167 (+)

Expression


Co-expression Network