G196057



Basic Information


Item Value
gene id G196057
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 23146812 ~ 23147635 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU266210
gaattactaaacatagattaattaagaagttccccatacttttagagttacacagcacattggccaggagtcatacttgaacatctctctcagataaggccagatgggatgattgggaatgtcttgctgcttgtctgcctaatctctgggatctctgttttcttcattttcaatcatgtcgccgtccatactactagtgctaacgttaccaccatcaagctgcaattatttgccgcaaatgaatgcagaatgcggccgaatctgtcgagtcgtcttgtagtggtgcgttacatgcaacgtagcctacagtatattcccatccaattagattgaattcggtattgatcacgtgaaaaataataacggtaactccagtgaaattatttgaaacttgctagtgaggactagattaggaccgtatttatagctgatgctggtttcaaacttcgcgCCCCCATGGGggctgtaaaacacggacagagacaacttctttcttttgatgctttacaagcaacgtgaaacctagctaacaggtgaagaacacaaacaactaaatcactagctaacctactttaactgtgcaggaactatagaccaatacaacaacaggcttaaatgaactgacaacataagttatacgacttacagttctcaaggacgcacacacaccatctcaactgattatcctccggacagcagtctctttttctcacatttttttGCGTCCGCgcctattctccgacattacgacctcttgtacaaaactaaagtaacgagccaattttttaaatgtaaggagtagaaagtaccgatattcgtgttaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU266210 True 824 lncRNA 0.41 1 23146812 23147635

Neighbor


gene id symbol gene type direction distance location
LOC120547578 NA coding upstream 20714 23112659 ~ 23126098 (+)
LOC120547579 NA coding upstream 36241 23099915 ~ 23110571 (+)
LOC120547580 NA coding upstream 52572 23084932 ~ 23094240 (+)
gpatch11 gpatch11,LOC102790129,LOC102788696 coding upstream 62906 23080979 ~ 23083906 (+)
vit vit coding upstream 114680 23011389 ~ 23032132 (+)
LOC120547586 ggps1,LOC102790345 coding downstream 155569 23303204 ~ 23319036 (+)
LOC120547587 ggps1,LOC102790345 coding downstream 189746 23337381 ~ 23351721 (+)
gpr137ba gpr137b,LOC104924458,LOC103372484 coding downstream 340599 23488234 ~ 23494167 (+)
tsnax tsnax coding downstream 401505 23549140 ~ 23557843 (+)
map10 NA coding downstream 614773 23762408 ~ 23765382 (+)
G196036 NA non-coding upstream 2160 23136446 ~ 23144652 (+)
G196028 NA non-coding upstream 112021 23032452 ~ 23034791 (+)
G196017 NA non-coding upstream 156110 22990433 ~ 22990702 (+)
G196016 NA non-coding upstream 156922 22989684 ~ 22989890 (+)
G195973 NA non-coding upstream 182682 22963967 ~ 22964130 (+)
G196111 NA non-coding downstream 41965 23189600 ~ 23190156 (+)
G196124 NA non-coding downstream 110501 23258136 ~ 23261055 (+)
G196140 NA non-coding downstream 206337 23353972 ~ 23354341 (+)
G196174 NA non-coding downstream 319659 23467294 ~ 23470444 (+)
G196184 NA non-coding downstream 349533 23497168 ~ 23533059 (+)
tasp1 tasp1 other upstream 454208 22647914 ~ 22692604 (+)
kif16bb NA other upstream 962320 22155402 ~ 22184492 (+)
G195653 LOC102296834 other upstream 1631684 21514526 ~ 21515128 (+)
fbxo11a fbxo11,LOC104951339 other upstream 1814235 21318610 ~ 21332577 (+)
G195518 NA other upstream 2393003 20752773 ~ 20753809 (+)
disc1 disc1 other downstream 414648 23562283 ~ 23611337 (+)
klhdc3 klhdc3 other downstream 671279 23818914 ~ 23851605 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other downstream 1210291 24357926 ~ 24367599 (+)
LOC120548495 ate1 other downstream 1220319 24367954 ~ 24426502 (+)
G196439 wdr11 other downstream 1416915 24564550 ~ 24569167 (+)

Expression



Co-expression Network