G196328


Basic Information

Item Value
gene id G196328
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 24051189 ~ 24124149 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU266586
aaaaatggttaaaaaaaaaaaaaaaaaagtgtatggaGTCTTGCCAGAAGTGTCCAAGtcactgcctgtgtgtgtctgtgtaggtgTGCTATATGTTCGATGGTACTCCCTGAATAGTGTTACGTGAAACTTTTGCAATAGGAAACCTTTGGACAAAGGGCCTTCTGTATGAGTTAGttgttgCTTCCCACTAAATTGAAAGCACAACTAGCTTACATTTATTTCTTGACATGAATGCCAAATATATTTCAGAACTATGAAGTTGAATTGTACAACAAAACACTATTAGGTATGTCATTTCTCATACATTTCCCTCGCTTTGGAATGCACTTTCATGTGGTTTTCTACATACTTTAGCTCAAATTGGGACATACTTAGTTTTTTGAGGTGAGGTGTTAAAAGGGTGTTATATTTGAAATGTAAACCACTACCTATATTCTTGAgatggcagttttttttttgttgttttcaaaatgattgaattttttttataggGATGTTGTGTTTATGTTGATGGTTTCAAGTGCCCTACGAGGTCTGGAAAACTGTCACGGCTGTCTGTTACTTAGTTTTGCCACTTGCACCGTACGTGTCTGCCTGTGACTACACAGTCGAGTTTTCTTGTCTCCTGCTTTTTGAAGGGTTCACTATCTTCTTTTAGTTGGGAGGCCGACTGGCTCTTACCGATTTGTAAACTTGGGCTGTGAAGTGTTAGCCAGGGCAGAGTTGTTTGAGGGAATTTGTCATGCGAGTTAGCCTTTTTAAATACTAAACGGGCATGATGACAagtgtatttttaatgtatttgacctcaagtttttttttttttgccctaaATCTAGAGGTAGCATGGGGGTGTTTTACAAGACTGGATCAATGAGCAGGCATGCTCACTTTGTCACCGAAATTTAGCACAGCAACAAATTAACTCTTAACATCAGTGTTAGTTTTTTTCATTAATGGTCCGATTACAATAACAACATGCCATCTCGTTGCTCCTGTTACTTGAAATGCCACCCAGTGTCTTTGCACAAACCCTATTTTAAATGACATGACAGTATTTTTAAATTTAC
>TU266587
cagagaacacagatgagatatactgtattttgaatgtgcacaaagttttgaaaatgagcagaaatcttgctcaaacacatctgaaatattacagtccagtggtttattaattcattaaaatgaattaatgtatcattcaggtgaataattttaatatgcacatttaaggtggttacttcctcaacaaaagaagcaaaagtgggaagagtaaCCCCCagaccgccccccccccccCCCCTTCCCACTAAATTGAAAGCACAACTAGCTTACATTTATTTCTTGACATGAATGCCAAATATATTTCAGAACTATGAAGTTGAATTGTACAACAAAACACTATTAGGTATGTCATTTCTCATACATTTCCCTCGCTTTGGAATGCACTTTCATGTGGTTTTCTACATACTTTAGCTCAAATTGGGACATACTTAGTTTTTTGAGGTGAGGTGTTAAAAGGGTGTTATATTTGAAATGTAAACCACTACCTATATTCTTGAgatggcagttttttttttgttgttttcaaaatgattgaattttttttataggGATGTTGTGTTTATGTTGATGGTTTCAAGTGCCCTACGAGGTCTGGAAAACTGTCACGGCTGTCTGTTACTTAGTTTTGCCACTTGCACCGTACGTGTCTGCCTGTGACTACACAGTCGAGTTTTCTTGTCTCCTGCTTTTTGAAGGGTTCACTATCTTCTTTTAGTTGGGAGGCCGACTGGCTCTTACCGATTTGTAAACTTGGGCTGTGAAGTGTTAGCCAGGGCAGAGTTGTTTGAGGGAATTTGTCATGCGAGTTAGCCTTTTTAAATACTAAACGGGCATGATGACAagtgtatttttaatgtatttgacctcaagtttttttttttttgccctaaATCTAGAGGTAGCATGGGGGTGTTTTACAAGACTGGATCAATGAGCAGGCATGCTCACTTTGTCACCGAAATTTAGCACAGCAACAAATTAACTCTTAACATCAGTGTTAGTTTTTTTCATTAATGGTCCGATTACAATAACAACATGCCATCTCGTTGCTCCTGTTACTTGAAATGCCACCCAGTGTCTTTGCACAAACCCTATTTTAAATGACATGACAGTATTTTTAAATTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266586 False 1073 lncRNA 0.37 3 24122941 24124149
TU266587 True 1127 lncRNA 0.37 3 24051189 24124149

Neighbor

gene id symbol gene type direction distance location
npas4l LOC101471891 coding upstream 190322 23855715 ~ 23860867 (+)
ntpcr ntpcr,LOC103137650 coding upstream 280769 23766603 ~ 23770420 (+)
map10 NA coding upstream 285807 23762408 ~ 23765382 (+)
tsnax tsnax coding upstream 493346 23549140 ~ 23557843 (+)
gpr137ba gpr137b,LOC104924458,LOC103372484 coding upstream 557022 23488234 ~ 23494167 (+)
klc1b klc4,LOC102306811 coding downstream 6635 24130784 ~ 24160603 (+)
ptk7b ptk7 coding downstream 87823 24211972 ~ 24245841 (+)
srfb srf coding downstream 124049 24248198 ~ 24268024 (+)
ablim1a ablim1,LOC102784938,LOC102304155 coding downstream 160497 24284646 ~ 24329241 (+)
LOC120548489 LOC101469311,LOC104948545,LOC103376395,LOC102786201,LOC102303134 coding downstream 207723 24331872 ~ 24336022 (+)
LOC120548378 NA non-coding upstream 177026 23870544 ~ 23874163 (+)
G196195 NA non-coding upstream 507351 23543607 ~ 23543838 (+)
G196184 NA non-coding upstream 518130 23497168 ~ 23533059 (+)
G196174 NA non-coding upstream 580745 23467294 ~ 23470444 (+)
G196140 NA non-coding upstream 696848 23353972 ~ 23354341 (+)
G196336 NA non-coding downstream 36464 24160613 ~ 24162215 (+)
G196337 NA non-coding downstream 40051 24164200 ~ 24164631 (+)
G196332 NA non-coding downstream 144124 24268273 ~ 24270052 (+)
G196454 NA non-coding downstream 515265 24639414 ~ 24639857 (+)
G196457 NA non-coding downstream 516550 24640699 ~ 24642057 (+)
klhdc3 klhdc3 other upstream 199584 23818914 ~ 23851605 (+)
disc1 disc1 other upstream 439852 23562283 ~ 23611337 (+)
tasp1 tasp1 other upstream 1358585 22647914 ~ 22692604 (+)
kif16bb NA other upstream 1866697 22155402 ~ 22184492 (+)
G195653 LOC102296834 other upstream 2536061 21514526 ~ 21515128 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other downstream 233777 24357926 ~ 24367599 (+)
LOC120548495 ate1 other downstream 243805 24367954 ~ 24426502 (+)
G196439 wdr11 other downstream 440401 24564550 ~ 24569167 (+)
dact2 dact2,LOC103391347 other downstream 884325 25008474 ~ 25013249 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other downstream 1014898 25139047 ~ 25144254 (+)

Expression


Co-expression Network