G196332


Basic Information

Item Value
gene id G196332
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 24268273 ~ 24270052 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU266592
gcgcgtgcgtatttttgttgttgaaaatgtgtaattacatgtacacacacactgcaaggTGCCACAGCTTCACACCAGCCAAAGAGACATTTGTTTGTCTGAATGTTCCAGTGTGAGCAACTTGTGcacaaacgtgtgtgtgcacgcgcatATCCGGGGTTTGTAAATGGGCGGGGAGACGCTTATTGACTTAAAagagacatttgaaaatgtacatagtttttcttttcttttcttttctttttttattgataaCTTGTATTTTTAGCCTGGTTTAGTTCGTGCAACGGCATGTAGTTGTTTTTTACGTAGTGGTTTTGTATGTACATAAAAATGATTTgcataaagaaaaataattatttacatgtatatgtaaattaatttaatatacCATCATATGTTGATATACTGTCATGCTGTCGGGAGTTTTCACTACAAGATGGAGAAGGACCGCTGGATGTTTTTCTACATGTTTTGATTGTGACATTTGTAGGACTGTCCCTCGAACAGGATCAAGTTTCTGGGTCACAACGTGTTGAACACGAGATGATTTACTGTTAACATCTTCTTTACTTTAGCTGGGAAGGGTTCAGTGCTGATGACATGATCATTCACTATCAGTTTTGCGTGTGAGGATCTGGCACTTTCTTAGTTTGGAACCTGTTGACAAATCAGATGGACATTTAATTTAGCTCAACTTTTAACATATCAATTACATCAGTGTTAACACACATATTTGAATACAATTCTGTCATGTTTAACTCTTACACACAGTTAACATCCTTAAAGTGAGTGGAAGAGTTTGCTCCCTTATTTATAAATGCCAACAAACAGGTTATCAGATAAAAACATGAACTTTATGTTGTTGTGATCCAGTCTCCACTTGACTGCAGAACGTTAACTATGTGATGCTATATCTGACTTGAGTCAGGGCATTAACAAGATCTTGTATAGACCCTGCAATTCCACTTCAATGCTACGATCAAAGCATTGTTTCCTTGTCAAGCAGTCAGTTGTTCAGCGCAGTCTCAATGCTGTAGTATTACAACAGTAATGAGTATACATATTTTTGTACGAACAAGGATCTCTTATGAAGGAAAATTGACTTCAGGTGCTTCAAAAAATGTTAATCTACTTCTTGGAACTACAACTTAAGACCCTAGCTGACTGCAATCTCAGCATGTACCTCAGCAATCATTAAGAATGAGTTACTAGACTGAGAGCCTTCTTTCTGCACCATAGTGCCTCCTTTTTCATGGCTGATTTCTAAATCACTGCTAGgcaagggaaatgtaggatttaCTTCTTTCCAGACCACTTCGCATGACTTTGGGCTTTCATACAATCCTCTGCTGTGGCCAGAGATTTTTTTGACTCATTTCTACAGAATTAGCAGGATGACTGAGCATGCTGGCTTGAAGCCAAAGAGAATTGGACAGACCCATGCTGACTGCTGTTCAGTTATTCACTGGCAAGAGAGGTCATTTTCACGCTTGGTGTTCTCTGTTCTTGTACATTTCATGGTCATCCTGCAGGCTTGTTTGTGAAGGAAATTTACAGGTTAAAGACATTCAATCCCCCCAATATTATCTGGTGGTTTTTCAGAAATAGTATTTTAAAAGGCAATTATTGAAGAGAATTTGTGGTTTTCACCTTGTCATTAagagaaatggttgtgtgtatttttgtt
>TU266594
gcgcgtgcgtatttttgttgttgaaaatgtgtaattacatgtacacacacactgcaaggTGCCACAGCTTCACACCAGCCAAAGAGACATTTGTTTGTCTGAATGTTCCAGTGTGAGCAACTTGTGcacaaacgtgtgtgtgcacgcgcatATCCGGGGTTTGTAAATGGGCGGGGAGACGCTTATTGACTTAAAagagacatttgaaaatgtacatagtttttcttttcttttcttttctttttttattgataaCTTGTATTTTTAGCCTGGTTTAGTTCGTGCAACGGCATGTAGTTGTTTTTTACGTAGTGGTTTTGTATGTACATAAAAATGATTTgcataaagaaaaataattatttacatgtatatgtaaattaatttaatatacCATCATATGTTGATATACTGTCATGCTGTCGGGAGTTTTCACTACAAGATGGAGAAGGACCGCTGGATGTTTTTCTACATGTTTTGATTGTGACATTTGTAGGACTGTCCCTCGAACAGGATCAAGTTTCTGGGTCACAACGTGTTGAACACGAGATGATTTACTGTTAACATCTTCTTTACTTTAGCTGGGAAGGGTTCAGTGCTGATGACATGATCATTCACTATCAGTTTTGCGTGTGAGGATCTGGCACTTTCTTAGTTTGGAACCTGTTGACAAATCAGATGGACATTTAATTTAGCTCAACTTTTAACATATCAATTACATCAGTGTTAACACACATATTTGAATACAATTCTGTCATGTTTAACTCTTACACACAGTTAACATCCTTAAAGTGAGTGGAAGAGTTTGCTCCCTTATTTATAAATGCCAACAAACAGGTTATCAGATAAAAACATGAACTTTATGTTGTTGTGATCCAGTCTCCACTTGACTGCAGAACGTTAACTATGTGATGCTATATCTGACTTGAGTCAGGGCATTAACAAGATCTTGTATAGACCCTGCAATTCCACTTCAATGCTACGATCAAAGCATTGTTTCCTTGTCAAGCAGTCAGTTGTTCAGCGCAGTCTCAATGCTGTAGTATTACAACAGTAATGAGTATACATATTTTTGTACGAACAAGGATCTCTTATGAAGGAAAATTGACTTCAGGTGCTTCAAAAAATGTTAATCTACTTCTTGGAACTACAACTTAAGACCCTAGCTGACTGCAATCTCAGCATGTACCTCAGCAATCATTAAGAATGAGTTACTAGACTGAGAGCCTTCTTTCTGCACCATAGTGCCTCCTTTTTCATGGCTGATTTCTAAATCACTGCTAGgcaagggaaatgtaggatttaCTTCTTTCCAGACCACTTCGCATGACTTTGGGCTTTCATACAATCCTCTGCTGTGGCCAGAGATTTTTTTGACTCATTTCTACAGAATTAGCAGGATGACTGAGCATGCTGGCTTGAAGCCAAAGAGAATTGGACAGACCCATGCTGACTGCTGTTCAGTTATTCACTGGCAAGAGAGGTCATTTTCACGCTTGGTGTTCTCTGTTCTTGTACATTTCATGGTCATCCTGCAGGCTTGTTTGTGAAGGAAATTTACAGGTTAAAGACATTCAATCCCCCCAATATTATCTGGTGGTTTTTCAGAAATAGTATTTTAAAAGGC
>TU266595
AAATGCATAGGAAATATATCACGACATCCTTCATCGGAACCTATTTTCTATGCTGTTAGatggtgttattttttttttttttgtgtgtgtgcgcgtgcgtatttttgttgttgaaaatgtgtaattacatgtacacacacactgcaaggTGCCACAGCTTCACACCAGCCAAAGAGACATTTGTTTGTCTGAATGTTCCAGTGTGAGCAACTTGTGcacaaacgtgtgtgtgcacgcgcatATCCGGGGTTTGTAAATGGGCGGGGAGACGCTTATTGACTTAAAagagacatttgaaaatgtacatagtttttcttttcttttcttttctttttttattgataaCTTGTATTTTTAGCCTGGTTTAGTTCGTGCAACGGCATGTAGTTGTTTTTTACGTAGTGGTTTTGTATGTACATAAAAATGATTTgcataaagaaaaataattatttacatgtatatgtaaattaatttaatatacCATCATATGTTGATATACTGTCATGCTGTCGGGAGTTTTCACTACAAGATGGAGAAGGACCGCTGGATGTTTTTCTACATGTTTTGATTGTGACATTTGTAGGACTGTCCCTCGAACAGGATCAAGTTTCTGGGTCACAACGTGTTGAACACGAGATGATTTACTGTTAACATCTTCTTTACTTTAGCTGGGAAGGGTTCAGTGCTGATGACATGATCATTCACTATCAGTTTTGCGTGTGAGGATCTGGCACTTTCTTAGTTTGGAACCTGTTGACAAATCAGATGGACATTTAATTTAGCTCAACTTTTAACATATCAATTACATCAGTGTTAACACACATATTTGAATACAATTCTGTCATGTTTAACTCTTACACACAGTTAACATCCTTAAAGTGAGTGGAAGAGTTTGCTCCCTTATTTATAAATGCCAACAAACAGGTTATCAGATAAAAACATGAACTTTATGTTGTTGTGATCCAGTCTCCACTTGACTGCAGAACGTTAACTATGTGATGCTATATCTGACTTGAGTCAGGGCATTAACAAGATCTTGTATAGACCCTGCAATTCCACTTCAATGCTACGATCAAAGCATTGTTTCCTTGTCAAGCAGTCAGTTGTTCAGCGCAGTCTCAATGCTGTAGTATTACAACAGTAATGAGTATACATATTTTTGTACGAACAAGGATCTCTTATGAAGGAAAATTGACTTCAGGTGCTTCAAAAAATGTTAATCTACTTCTTGGAACTACAACTTAAGACCCTAGCTGACTGCAATCTCAGCATGTACCTCAGCAATCATTAAGAATGAGTTACTAGACTGAGAGCCTTCTTTCTGCACCATAGTGCCTCCTTTTTCATGGCTGATTTCTAAATCACTGCTAGgcaagggaaatgtaggatttaCTTCTTTCCAGACCACTTCGCATGACTTTGGGCTTTCATACAATCCTCTGCTGTGGCCAGAGATTTTTTTGACTCATTTCTACAGAATTAGCAGGATGACTGAGCATGCTGGCTTGAAGCCAAAGAGAATTGGACAGACCCATGCTGACTGCTGTTCAGTTATTCACTGGCAAGAGAGGTCATTTTCACGCTTGGTGTTCTCTGTTCTTGTACATTTCATGGTCATCCTGCAGGCTTGTTTGTGAAGGAAATTTACAGGTTAAAGACATTCAATCCCCCCAATATTATCTGGTGGTTTTTCAGAAATAGTATTTTAAAAGGCAATTATTGAAGAGAATTTGTGGTTTTCACCTTGTCATTAagagaaatggttgtgtgtatttttgtt

Function

GO: NA

KEGG:

id description
ko05012 Parkinson disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU266592 False 1690 lncRNA 0.38 1 24268363 24270052
TU266594 False 1624 lncRNA 0.38 1 24268363 24269986
TU266595 True 1780 lncRNA 0.37 1 24268273 24270052

Neighbor

gene id symbol gene type direction distance location
srfb srf coding upstream 249 24248198 ~ 24268024 (+)
ptk7b ptk7 coding upstream 22432 24211972 ~ 24245841 (+)
klc1b klc4,LOC102306811 coding upstream 107670 24130784 ~ 24160603 (+)
zmp:0000000755 LOC100695905,LOC101469954,LOC102307746,LOC103371009 coding upstream 146198 24062755 ~ 24122075 (+)
npas4l LOC101471891 coding upstream 407406 23855715 ~ 23860867 (+)
ablim1a ablim1,LOC102784938,LOC102304155 coding downstream 14594 24284646 ~ 24329241 (+)
LOC120548489 LOC101469311,LOC104948545,LOC103376395,LOC102786201,LOC102303134 coding downstream 61820 24331872 ~ 24336022 (+)
habp2 NA coding downstream 66070 24336122 ~ 24340184 (+)
fgfr2 fgfr2,LOC102787384 coding downstream 184816 24454868 ~ 24494403 (+)
LOC120548496 cdh23,LOC107989583 coding downstream 472874 24742926 ~ 24840747 (+)
G196337 NA non-coding upstream 103642 24164200 ~ 24164631 (+)
G196336 NA non-coding upstream 106058 24160613 ~ 24162215 (+)
G196328 NA non-coding upstream 144124 24051189 ~ 24124149 (+)
LOC120548378 NA non-coding upstream 394110 23870544 ~ 23874163 (+)
G196195 NA non-coding upstream 724435 23543607 ~ 23543838 (+)
G196454 NA non-coding downstream 369362 24639414 ~ 24639857 (+)
G196457 NA non-coding downstream 370647 24640699 ~ 24642057 (+)
G196475 NA non-coding downstream 573391 24843443 ~ 24843852 (+)
G196476 NA non-coding downstream 577062 24847114 ~ 24847690 (+)
G196481 NA non-coding downstream 603750 24873802 ~ 24913468 (+)
klhdc3 klhdc3 other upstream 416668 23818914 ~ 23851605 (+)
disc1 disc1 other upstream 656936 23562283 ~ 23611337 (+)
tasp1 tasp1 other upstream 1575669 22647914 ~ 22692604 (+)
kif16bb NA other upstream 2083781 22155402 ~ 22184492 (+)
G195653 LOC102296834 other upstream 2753145 21514526 ~ 21515128 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other downstream 87874 24357926 ~ 24367599 (+)
LOC120548495 ate1 other downstream 97902 24367954 ~ 24426502 (+)
G196439 wdr11 other downstream 294498 24564550 ~ 24569167 (+)
dact2 dact2,LOC103391347 other downstream 738422 25008474 ~ 25013249 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other downstream 868995 25139047 ~ 25144254 (+)

Expression


Co-expression Network