G196475


Basic Information

Item Value
gene id G196475
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 24843443 ~ 24843852 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU266781
ttgatggctaattgcaaatttggtaaaacgtgtcggactttaggagctccacacagtctgacgagaaagcgacagcctgctgggctccatacccagggcaaagtcaccctttgtggatactgcatacggggctccgcggccagctgccggcataactatatctataaataatacatttacggtttgaatgtcccaatgtcttataaagctaaccgttgtgtccgatttgattttaaggcatttttatgaacgcgaggcgtctttgtaggacaagcagctgcttgctatatgtcccattcattacaatggggaaataccgcagctagctagctacactttcgccataactaaattatatttactgtttgaatttcttcacgccacttatacaacacattccccaatgtctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266781 True 410 lncRNA 0.44 1 24843443 24843852

Neighbor

gene id symbol gene type direction distance location
LOC120548496 cdh23,LOC107989583 coding upstream 2696 24742926 ~ 24840747 (+)
fgfr2 fgfr2,LOC102787384 coding upstream 349040 24454868 ~ 24494403 (+)
habp2 NA coding upstream 503259 24336122 ~ 24340184 (+)
LOC120548489 LOC101469311,LOC104948545,LOC103376395,LOC102786201,LOC102303134 coding upstream 507421 24331872 ~ 24336022 (+)
ablim1a ablim1,LOC102784938,LOC102304155 coding upstream 514202 24284646 ~ 24329241 (+)
cdh23 cdh23 coding downstream 23408 24867260 ~ 24944419 (+)
smoc2 smoc2 coding downstream 110860 24954712 ~ 24976820 (+)
lrrfip2 lrrfip2,LOC102790484,LOC103477154 coding downstream 189620 25033472 ~ 25054947 (+)
fam83ha NA coding downstream 231362 25075214 ~ 25084770 (+)
LOC120547833 LOC103359796,LOC104940887,LOC102792006,LOC107088245,LOC101481961 coding downstream 242062 25085914 ~ 25089070 (+)
G196457 NA non-coding upstream 201386 24640699 ~ 24642057 (+)
G196454 NA non-coding upstream 203586 24639414 ~ 24639857 (+)
G196332 NA non-coding upstream 573391 24268273 ~ 24270052 (+)
G196337 NA non-coding upstream 678812 24164200 ~ 24164631 (+)
G196336 NA non-coding upstream 681228 24160613 ~ 24162215 (+)
G196476 NA non-coding downstream 3262 24847114 ~ 24847690 (+)
G196481 NA non-coding downstream 29950 24873802 ~ 24913468 (+)
G196485 eif3l non-coding downstream 103986 24947838 ~ 24949032 (+)
LOC120547601 NA non-coding downstream 267543 25111395 ~ 25119124 (+)
G196558 NA non-coding downstream 334307 25178159 ~ 25181813 (+)
G196439 wdr11 other upstream 274276 24564550 ~ 24569167 (+)
LOC120548495 ate1 other upstream 416941 24367954 ~ 24426502 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other upstream 475844 24357926 ~ 24367599 (+)
klhdc3 klhdc3 other upstream 991838 23818914 ~ 23851605 (+)
disc1 disc1 other upstream 1232106 23562283 ~ 23611337 (+)
dact2 dact2,LOC103391347 other downstream 164622 25008474 ~ 25013249 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other downstream 295195 25139047 ~ 25144254 (+)
LOC120548229 rab11fip2 other downstream 637979 25481831 ~ 25495505 (+)
zgc:110045 LOC102779765,LOC102305383,LOC100704767,LOC101482925,LOC102197868 other downstream 750644 25594496 ~ 25674906 (+)
prdx3 prdx3 other downstream 769555 25613407 ~ 25620675 (+)

Expression


Co-expression Network